RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 LINC00305Q7Z4B0 112 aa6.84□□□□□ -1.31
SSBP3-215ENST00000533946 TMEM252Q8N6L7 170 aa6.84□□□□□ -1.31
SSBP3-215ENST00000533946 ZNF738Q8NE65 137 aa6.84□□□□□ -1.31
SSBP3-215ENST00000533946 HRH4Q9H3N8 390 aa6.84□□□□□ -1.31
SSBP3-215ENST00000533946 RPRMQ9NS64 109 aa6.84□□□□□ -1.31
SSBP3-215ENST00000533946 DKK2Q9UBU2 259 aa6.84□□□□□ -1.31
SSBP3-215ENST00000533946 NACAE9PAV3 2078 aa6.83□□□□□ -1.32
SSBP3-215ENST00000533946 UBE2L5PA0A1B0GUS4 154 aa6.83□□□□□ -1.32
SSBP3-215ENST00000533946 L7N2F9 121 aa6.83□□□□□ -1.32
SSBP3-215ENST00000533946 GOSR2O14653 212 aa6.83□□□□□ -1.32
SSBP3-215ENST00000533946 IGLC2P0DOY2 106 aa6.83□□□□□ -1.32
SSBP3-215ENST00000533946 HTN3P15516 51 aa6.83□□□□□ -1.32
SSBP3-215ENST00000533946 H2BFSP57053 126 aa6.83□□□□□ -1.32
SSBP3-215ENST00000533946 VAMP2P63027 116 aa6.83□□□□□ -1.32
SSBP3-215ENST00000533946 HIST1H1AQ02539 215 aaPredicted RBP6.83□□□□□ -1.32
SSBP3-215ENST00000533946 PSG3Q16557 428 aa6.83□□□□□ -1.32
SSBP3-215ENST00000533946 LRRC37A5PQ49AS3 106 aa6.83□□□□□ -1.32
SSBP3-215ENST00000533946 EBLN2Q6P2I7 272 aa6.83□□□□□ -1.32
SSBP3-215ENST00000533946 OR8A1Q8NGG7 326 aa6.83□□□□□ -1.32
SSBP3-215ENST00000533946 SAT2Q96F10 170 aaPredicted RBP6.83□□□□□ -1.32
SSBP3-215ENST00000533946 CLUHP3Q96NS8 147 aa6.83□□□□□ -1.32
SSBP3-215ENST00000533946 ZNF586Q9NXT0 402 aa6.83□□□□□ -1.32
SSBP3-215ENST00000533946 MGAT4CQ9UBM8 478 aa6.83□□□□□ -1.32
SSBP3-215ENST00000533946 WDR83OSQ9Y284 106 aa6.83□□□□□ -1.32
SSBP3-215ENST00000533946 YTHDF2Q9Y5A9 579 aaKnown RBP6.83□□□□□ -1.32
SSBP3-215ENST00000533946 A0A087X0K7 114 aa6.82□□□□□ -1.32
SSBP3-215ENST00000533946 TRAV10A0A0B4J240 114 aa6.82□□□□□ -1.32
SSBP3-215ENST00000533946 LOC102723971A0A1B0GUV8 181 aa6.82□□□□□ -1.32
SSBP3-215ENST00000533946 J3KRW8 73 aa6.82□□□□□ -1.32
SSBP3-215ENST00000533946 M0R2N4 97 aa6.82□□□□□ -1.32
SSBP3-215ENST00000533946 M0R3E3 92 aa6.82□□□□□ -1.32
SSBP3-215ENST00000533946 CFDP00746 253 aaPredicted RBP6.82□□□□□ -1.32
SSBP3-215ENST00000533946 PYYP10082 97 aa6.82□□□□□ -1.32
SSBP3-215ENST00000533946 NUP62P37198 522 aaPredicted RBP6.82□□□□□ -1.32
SSBP3-215ENST00000533946 CAMLGP49069 296 aa6.82□□□□□ -1.32
SSBP3-215ENST00000533946 RAP2BP61225 183 aa6.82□□□□□ -1.32
SSBP3-215ENST00000533946 ZNF846Q147U1 533 aa6.82□□□□□ -1.32
SSBP3-215ENST00000533946 VWC2Q2TAL6 325 aa6.82□□□□□ -1.32
SSBP3-215ENST00000533946 THAP6Q8TBB0 222 aa6.82□□□□□ -1.32
SSBP3-215ENST00000533946 RPUSD4Q96CM3 377 aaKnown RBP6.82□□□□□ -1.32
SSBP3-215ENST00000533946 IGF2BP2-AS1Q96M15 143 aa6.82□□□□□ -1.32
SSBP3-215ENST00000533946 NEU1Q99519 415 aa6.82□□□□□ -1.32
SSBP3-215ENST00000533946 RNF126Q9BV68 326 aa6.82□□□□□ -1.32
SSBP3-215ENST00000533946 ZNF331Q9NQX6 463 aaPredicted RBP6.82□□□□□ -1.32
SSBP3-215ENST00000533946 LYRM2Q9NU23 88 aaPredicted RBP6.82□□□□□ -1.32
SSBP3-215ENST00000533946 PIGBOS1A0A0B4J2F0 54 aa6.81□□□□□ -1.32
SSBP3-215ENST00000533946 FNDC10F2Z333 226 aa6.81□□□□□ -1.32
SSBP3-215ENST00000533946 COX7A2P2O60397 106 aa6.81□□□□□ -1.32
SSBP3-215ENST00000533946 NDUFB4O95168 129 aa6.81□□□□□ -1.32
SSBP3-215ENST00000533946 CT45A10P0DMU9 189 aa6.81□□□□□ -1.32
SSBP3-215ENST00000533946 RPL7P18124 248 aaKnown RBP6.81□□□□□ -1.32
SSBP3-215ENST00000533946 FGF7P21781 194 aa6.81□□□□□ -1.32
SSBP3-215ENST00000533946 SELENOTP62341 195 aa6.81□□□□□ -1.32
SSBP3-215ENST00000533946 ERCC8Q13216 396 aa6.81□□□□□ -1.32
SSBP3-215ENST00000533946 TMEM41BQ5BJD5 291 aa6.81□□□□□ -1.32
SSBP3-215ENST00000533946 C10orf113Q5VZT2 155 aa6.81□□□□□ -1.32
SSBP3-215ENST00000533946 C1QTNF4Q9BXJ3 329 aa6.81□□□□□ -1.32
SSBP3-215ENST00000533946 UQCC1Q9NVA1 299 aa6.81□□□□□ -1.32
SSBP3-215ENST00000533946 INMT-MINDY4F8WBC2 141 aa6.8□□□□□ -1.32
SSBP3-215ENST00000533946 BOLA2-SMG1P6H3BVE0 249 aa6.8□□□□□ -1.32
SSBP3-215ENST00000533946 HTN1P15515 57 aa6.8□□□□□ -1.32
SSBP3-215ENST00000533946 MEOX2P50222 304 aa6.8□□□□□ -1.32
SSBP3-215ENST00000533946 SULT1A1P50225 295 aa6.8□□□□□ -1.32
SSBP3-215ENST00000533946 NUTF2P61970 127 aaKnown RBP6.8□□□□□ -1.32
SSBP3-215ENST00000533946 RHOBP62745 196 aa6.8□□□□□ -1.32
SSBP3-215ENST00000533946 BAXQ07812 192 aa6.8□□□□□ -1.32
SSBP3-215ENST00000533946 CLINT1Q14677 625 aa6.8□□□□□ -1.32
SSBP3-215ENST00000533946 MZT2BQ6NZ67 158 aa6.8□□□□□ -1.32
SSBP3-215ENST00000533946 MIR17HGQ75NE6 70 aa6.8□□□□□ -1.32
SSBP3-215ENST00000533946 ZNF546Q86UE3 836 aa6.8□□□□□ -1.32
SSBP3-215ENST00000533946 S100ZQ8WXG8 99 aa6.8□□□□□ -1.32
SSBP3-215ENST00000533946 FAM167A-AS1Q96KT0 104 aa6.8□□□□□ -1.32
SSBP3-215ENST00000533946 WFDC1Q9HC57 220 aa6.8□□□□□ -1.32
SSBP3-215ENST00000533946 GPN1Q9HCN4 374 aaPredicted RBP6.8□□□□□ -1.32
SSBP3-215ENST00000533946 DNAJC4Q9NNZ3 241 aa6.8□□□□□ -1.32
SSBP3-215ENST00000533946 SLC39A9Q9NUM3 307 aa6.8□□□□□ -1.32
SSBP3-215ENST00000533946 PTTG2Q9NZH5 202 aa6.8□□□□□ -1.32
SSBP3-215ENST00000533946 PFDN2Q9UHV9 154 aa6.8□□□□□ -1.32
SSBP3-215ENST00000533946 PXMP4Q9Y6I8 212 aa6.8□□□□□ -1.32
SSBP3-215ENST00000533946 IGLV2-18A0A075B6J9 118 aa6.79□□□□□ -1.32
SSBP3-215ENST00000533946 C11orf94C9JXX5 98 aa6.79□□□□□ -1.32
SSBP3-215ENST00000533946 SPART-AS1P0CW21 52 aa6.79□□□□□ -1.32
SSBP3-215ENST00000533946 RRN3P1Q2M238 152 aa6.79□□□□□ -1.32
SSBP3-215ENST00000533946 PRR9Q5T870 116 aa6.79□□□□□ -1.32
SSBP3-215ENST00000533946 GFI1BQ5VTD9 330 aa6.79□□□□□ -1.32
SSBP3-215ENST00000533946 TMEM88Q6PEY1 159 aa6.79□□□□□ -1.32
SSBP3-215ENST00000533946 EXOC3-AS1Q8N2X6 119 aa6.79□□□□□ -1.32
SSBP3-215ENST00000533946 OR5C1Q8NGR4 320 aa6.79□□□□□ -1.32
SSBP3-215ENST00000533946 ENKURQ8TC29 256 aa6.79□□□□□ -1.32
SSBP3-215ENST00000533946 ZNF503Q96F45 646 aa6.79□□□□□ -1.32
SSBP3-215ENST00000533946 GPR82Q96P67 336 aa6.79□□□□□ -1.32
SSBP3-215ENST00000533946 NIPSNAP3BQ9BS92 247 aa6.79□□□□□ -1.32
SSBP3-215ENST00000533946 GGACTQ9BVM4 153 aa6.79□□□□□ -1.32
SSBP3-215ENST00000533946 SLC25A2Q9BXI2 301 aa6.79□□□□□ -1.32
SSBP3-215ENST00000533946 SMIM3Q9BZL3 60 aa6.79□□□□□ -1.32
SSBP3-215ENST00000533946 GOLT1BQ9Y3E0 138 aa6.79□□□□□ -1.32
SSBP3-215ENST00000533946 LRP1BQ9NZR2 4599 aa6.78□□□□□ -1.32
SSBP3-215ENST00000533946 DNAH5Q8TE73 4624 aa6.78□□□□□ -1.32
SSBP3-215ENST00000533946 DUSP14O95147 198 aaKnown RBP6.78□□□□□ -1.32
SSBP3-215ENST00000533946 HBE1P02100 147 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms