RNA–Protein interactions for RNA: ENST00000533686.5

PACSIN3-210, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 3

Gene PACSIN3, Length 443 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-210ENST00000533686 RBMY1EA6NEQ0 496 aaKnown RBP12.18□□□□□ -0.46
PACSIN3-210ENST00000533686 H3BQ15 152 aa12.18□□□□□ -0.46
PACSIN3-210ENST00000533686 RBMY1DP0C7P1 496 aaKnown RBP12.18□□□□□ -0.46
PACSIN3-210ENST00000533686 TMEM41BQ5BJD5 291 aa12.18□□□□□ -0.46
PACSIN3-210ENST00000533686 RPP25LQ8N5L8 163 aaKnown RBP12.18□□□□□ -0.46
PACSIN3-210ENST00000533686 LRRC20Q8TCA0 184 aa12.18□□□□□ -0.46
PACSIN3-210ENST00000533686 LINC00052Q96N35 136 aa12.18□□□□□ -0.46
PACSIN3-210ENST00000533686 SLC50A1Q9BRV3 221 aa12.18□□□□□ -0.46
PACSIN3-210ENST00000533686 OR51M1Q9H341 326 aa12.18□□□□□ -0.46
PACSIN3-210ENST00000533686 ZNF253O75346 499 aa12.17□□□□□ -0.46
PACSIN3-210ENST00000533686 SEC11BP0C7V7 166 aa12.17□□□□□ -0.46
PACSIN3-210ENST00000533686 TPT1P13693 172 aaKnown RBP12.17□□□□□ -0.46
PACSIN3-210ENST00000533686 PDE6HQ13956 83 aa12.17□□□□□ -0.46
PACSIN3-210ENST00000533686 ZNF124Q15973 351 aa12.17□□□□□ -0.46
PACSIN3-210ENST00000533686 KHDC3LQ587J8 217 aa12.17□□□□□ -0.46
PACSIN3-210ENST00000533686 FAM122CQ6P4D5 195 aa12.17□□□□□ -0.46
PACSIN3-210ENST00000533686 BAP18Q8IXM2 172 aa12.17□□□□□ -0.46
PACSIN3-210ENST00000533686 STOML3Q8TAV4 291 aa12.17□□□□□ -0.46
PACSIN3-210ENST00000533686 SAT2Q96F10 170 aaPredicted RBP12.17□□□□□ -0.46
PACSIN3-210ENST00000533686 PAXXQ9BUH6 204 aa12.17□□□□□ -0.46
PACSIN3-210ENST00000533686 ZNF331Q9NQX6 463 aaPredicted RBP12.17□□□□□ -0.46
PACSIN3-210ENST00000533686 RPRMQ9NS64 109 aa12.17□□□□□ -0.46
PACSIN3-210ENST00000533686 ZNF586Q9NXT0 402 aa12.17□□□□□ -0.46
PACSIN3-210ENST00000533686 CLEC5AQ9NY25 188 aa12.17□□□□□ -0.46
PACSIN3-210ENST00000533686 TRBV19A0A075B6N1 114 aa12.16□□□□□ -0.46
PACSIN3-210ENST00000533686 LOC102724200A0A096LPH7 203 aaPredicted RBP12.16□□□□□ -0.46
PACSIN3-210ENST00000533686 PYYP10082 97 aa12.16□□□□□ -0.46
PACSIN3-210ENST00000533686 C4BPBP20851 252 aa12.16□□□□□ -0.46
PACSIN3-210ENST00000533686 CDC34P49427 236 aaPredicted RBP12.16□□□□□ -0.46
PACSIN3-210ENST00000533686 PQLC2Q6ZP29 291 aa12.16□□□□□ -0.46
PACSIN3-210ENST00000533686 C9orf62Q8N4C0 152 aa12.16□□□□□ -0.46
PACSIN3-210ENST00000533686 C20orf173Q96LM9 149 aa12.16□□□□□ -0.46
PACSIN3-210ENST00000533686 OR7C2O60412 319 aa12.15□□□□□ -0.46
PACSIN3-210ENST00000533686 SNRPCP09234 159 aaKnown RBP12.15□□□□□ -0.46
PACSIN3-210ENST00000533686 NBEAP1P0C6P0 100 aa12.15□□□□□ -0.46
PACSIN3-210ENST00000533686 AKR1C8PQ5T2L2 129 aa12.15□□□□□ -0.46
PACSIN3-210ENST00000533686 FOXI2Q6ZQN5 318 aa12.15□□□□□ -0.46
PACSIN3-210ENST00000533686 RNF141Q8WVD5 230 aa12.15□□□□□ -0.46
PACSIN3-210ENST00000533686 FXYD5Q96DB9 178 aa12.15□□□□□ -0.46
PACSIN3-210ENST00000533686 ZNF503Q96F45 646 aa12.15□□□□□ -0.46
PACSIN3-210ENST00000533686 ACTR3CQ9C0K3 210 aaPredicted RBP12.15□□□□□ -0.46
PACSIN3-210ENST00000533686 KIR2DL5BA0A0G2JN68 375 aa12.14□□□□□ -0.47
PACSIN3-210ENST00000533686 KIR2DL5BA0A0G2JPC4 375 aa12.14□□□□□ -0.47
PACSIN3-210ENST00000533686 KNCNA6PVL3 124 aa12.14□□□□□ -0.47
PACSIN3-210ENST00000533686 H3BTX0 84 aa12.14□□□□□ -0.47
PACSIN3-210ENST00000533686 STAG3L2P0CL84 134 aa12.14□□□□□ -0.47
PACSIN3-210ENST00000533686 STAG3L3P0CL85 134 aa12.14□□□□□ -0.47
PACSIN3-210ENST00000533686 PSG3Q16557 428 aa12.14□□□□□ -0.47
PACSIN3-210ENST00000533686 HAGHQ16775 308 aa12.14□□□□□ -0.47
PACSIN3-210ENST00000533686 IGFL4Q6B9Z1 124 aa12.14□□□□□ -0.47
PACSIN3-210ENST00000533686 SLC51BQ86UW2 128 aa12.14□□□□□ -0.47
PACSIN3-210ENST00000533686 SBSPONQ8IVN8 264 aa12.14□□□□□ -0.47
PACSIN3-210ENST00000533686 STHQ8IWL8 128 aa12.14□□□□□ -0.47
PACSIN3-210ENST00000533686 KIR2DL5AQ8N109 375 aa12.14□□□□□ -0.47
PACSIN3-210ENST00000533686 KIR2DL5BQ8NHK3 375 aa12.14□□□□□ -0.47
PACSIN3-210ENST00000533686 RAB24Q969Q5 203 aa12.14□□□□□ -0.47
PACSIN3-210ENST00000533686 SAV1Q9H4B6 383 aaPredicted RBP12.14□□□□□ -0.47
PACSIN3-210ENST00000533686 UMAD1C9J7I0 102 aa12.13□□□□□ -0.47
PACSIN3-210ENST00000533686 SLC17A3O00476 420 aa12.13□□□□□ -0.47
PACSIN3-210ENST00000533686 NDUFB4O95168 129 aa12.13□□□□□ -0.47
PACSIN3-210ENST00000533686 OR10J4P0C629 311 aa12.13□□□□□ -0.47
PACSIN3-210ENST00000533686 NHLRC4P0CG21 123 aaPredicted RBP12.13□□□□□ -0.47
PACSIN3-210ENST00000533686 HLA-DRB4P13762 266 aa12.13□□□□□ -0.47
PACSIN3-210ENST00000533686 APOC4P55056 127 aa12.13□□□□□ -0.47
PACSIN3-210ENST00000533686 PSG9Q00887 426 aa12.13□□□□□ -0.47
PACSIN3-210ENST00000533686 ACTL10Q5JWF8 245 aa12.13□□□□□ -0.47
PACSIN3-210ENST00000533686 TRPT1Q86TN4 253 aaKnown RBP12.13□□□□□ -0.47
PACSIN3-210ENST00000533686 RNF182Q8N6D2 247 aa12.13□□□□□ -0.47
PACSIN3-210ENST00000533686 HLA-DRB4X5D2U9 266 aa12.13□□□□□ -0.47
PACSIN3-210ENST00000533686 DNAH9Q9NYC9 4486 aa12.13□□□□□ -0.47
PACSIN3-210ENST00000533686 CTXND1A0A1B0GTU2 59 aa12.12□□□□□ -0.47
PACSIN3-210ENST00000533686 H3BMM0 161 aa12.12□□□□□ -0.47
PACSIN3-210ENST00000533686 UBE2CO00762 179 aa12.12□□□□□ -0.47
PACSIN3-210ENST00000533686 RPL35AP18077 110 aaKnown RBP12.12□□□□□ -0.47
PACSIN3-210ENST00000533686 UBE2L3P68036 154 aaKnown RBP12.12□□□□□ -0.47
PACSIN3-210ENST00000533686 EIF5AL1Q6IS14 154 aaKnown RBP12.12□□□□□ -0.47
PACSIN3-210ENST00000533686 EBLN2Q6P2I7 272 aa12.12□□□□□ -0.47
PACSIN3-210ENST00000533686 BLNKQ8WV28 456 aa12.12□□□□□ -0.47
PACSIN3-210ENST00000533686 CLUHP3Q96NS8 147 aa12.12□□□□□ -0.47
PACSIN3-210ENST00000533686 ASCL2Q99929 193 aa12.12□□□□□ -0.47
PACSIN3-210ENST00000533686 PRELID1Q9Y255 219 aa12.12□□□□□ -0.47
PACSIN3-210ENST00000533686 A0A0J9YX75 114 aa12.11□□□□□ -0.47
PACSIN3-210ENST00000533686 EIF3GO75821 320 aaKnown RBP eCLIP12.11□□□□□ -0.47
PACSIN3-210ENST00000533686 HLA-DMBP28068 263 aa12.11□□□□□ -0.47
PACSIN3-210ENST00000533686 ZNF726P1Q15940 193 aa12.11□□□□□ -0.47
PACSIN3-210ENST00000533686 LYPD1Q8N2G4 141 aa12.11□□□□□ -0.47
PACSIN3-210ENST00000533686 ZNF738Q8NE65 137 aa12.11□□□□□ -0.47
PACSIN3-210ENST00000533686 MRPL53Q96EL3 112 aaKnown RBP12.11□□□□□ -0.47
PACSIN3-210ENST00000533686 CSTL1Q9H114 145 aa12.11□□□□□ -0.47
PACSIN3-210ENST00000533686 PLA2G2EQ9NZK7 142 aa12.11□□□□□ -0.47
PACSIN3-210ENST00000533686 HMGB3O15347 200 aaKnown RBP12.1□□□□□ -0.47
PACSIN3-210ENST00000533686 CXorf1O96002 111 aa12.1□□□□□ -0.47
PACSIN3-210ENST00000533686 ARL14EPLP0DKL9 152 aa12.1□□□□□ -0.47
PACSIN3-210ENST00000533686 DEFB1P60022 68 aa12.1□□□□□ -0.47
PACSIN3-210ENST00000533686 GDF5OSQ5U4N7 250 aa12.1□□□□□ -0.47
PACSIN3-210ENST00000533686 DPPA3Q6W0C5 159 aa12.1□□□□□ -0.47
PACSIN3-210ENST00000533686 SUN5Q8TC36 379 aa12.1□□□□□ -0.47
PACSIN3-210ENST00000533686 TMED6Q8WW62 240 aa12.1□□□□□ -0.47
PACSIN3-210ENST00000533686 RPUSD4Q96CM3 377 aaKnown RBP12.1□□□□□ -0.47
PACSIN3-210ENST00000533686 TM2D3Q9BRN9 247 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms