RNA–Protein interactions for RNA: ENST00000533667.5

CTNND1-236, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-236ENST00000533667 S100A7L2Q5SY68 101 aa5.71□□□□□ -1.5
CTNND1-236ENST00000533667 DUX4L9Q6RFH8 374 aaPredicted RBP5.71□□□□□ -1.5
CTNND1-236ENST00000533667 TEX43Q6ZNM6 134 aa5.71□□□□□ -1.5
CTNND1-236ENST00000533667 ZNF329Q86UD4 541 aa5.71□□□□□ -1.5
CTNND1-236ENST00000533667 ABCA7Q8IZY2 2146 aa5.71□□□□□ -1.5
CTNND1-236ENST00000533667 B4DSR2 109 aa5.71□□□□□ -1.5
CTNND1-236ENST00000533667 LCN12Q6JVE5 192 aa5.71□□□□□ -1.5
CTNND1-236ENST00000533667 Q86TA4 180 aa5.71□□□□□ -1.5
CTNND1-236ENST00000533667 SHANK2-AS3Q9BTD1 123 aa5.71□□□□□ -1.5
CTNND1-236ENST00000533667 ZNF688P0C7X2 276 aa5.7□□□□□ -1.5
CTNND1-236ENST00000533667 RPL15P61313 204 aaKnown RBP5.7□□□□□ -1.5
CTNND1-236ENST00000533667 C10orf91Q5T1B1 145 aa5.7□□□□□ -1.5
CTNND1-236ENST00000533667 GTSCR1Q86UQ5 136 aa5.7□□□□□ -1.5
CTNND1-236ENST00000533667 TMEM256Q8N2U0 113 aa5.7□□□□□ -1.5
CTNND1-236ENST00000533667 RCHY1Q96PM5 261 aa5.7□□□□□ -1.5
CTNND1-236ENST00000533667 KIR2DL5BA0A0G2JN68 375 aa5.7□□□□□ -1.5
CTNND1-236ENST00000533667 KIR2DL5BA0A0G2JPC4 375 aa5.7□□□□□ -1.5
CTNND1-236ENST00000533667 NDUFB8O95169 186 aa5.7□□□□□ -1.5
CTNND1-236ENST00000533667 KIR2DL5AQ8N109 375 aa5.7□□□□□ -1.5
CTNND1-236ENST00000533667 TMEM75Q8N9X5 138 aa5.7□□□□□ -1.5
CTNND1-236ENST00000533667 CHCHD5Q9BSY4 110 aa5.7□□□□□ -1.5
CTNND1-236ENST00000533667 SNRNP200O75643 2136 aaKnown RBP5.7□□□□□ -1.5
CTNND1-236ENST00000533667 C5orf63A6NC05 138 aa5.7□□□□□ -1.5
CTNND1-236ENST00000533667 IGLC2P0DOY2 106 aa5.7□□□□□ -1.5
CTNND1-236ENST00000533667 IGLC3P0DOY3 106 aa5.7□□□□□ -1.5
CTNND1-236ENST00000533667 Q6ZS92 163 aa5.7□□□□□ -1.5
CTNND1-236ENST00000533667 PHLDA1Q8WV24 401 aaPredicted RBP5.7□□□□□ -1.5
CTNND1-236ENST00000533667 PTH2Q96A98 100 aa5.7□□□□□ -1.5
CTNND1-236ENST00000533667 CRIM1Q9NZV1 1036 aa5.7□□□□□ -1.5
CTNND1-236ENST00000533667 NCR2O95944 276 aa5.7□□□□□ -1.5
CTNND1-236ENST00000533667 ADCYAP1P18509 176 aa5.7□□□□□ -1.5
CTNND1-236ENST00000533667 ZNF876PQ49A33 203 aa5.7□□□□□ -1.5
CTNND1-236ENST00000533667 PLXNA3P51805 1871 aa5.7□□□□□ -1.5
CTNND1-236ENST00000533667 CACNA1DQ01668 2161 aa5.7□□□□□ -1.5
CTNND1-236ENST00000533667 CEP290O15078 2479 aa5.7□□□□□ -1.5
CTNND1-236ENST00000533667 A0A0G2JRQ6 117 aa5.69□□□□□ -1.5
CTNND1-236ENST00000533667 SRRM4A7MD48 611 aaKnown RBP5.69□□□□□ -1.5
CTNND1-236ENST00000533667 E9PQ18 207 aa5.69□□□□□ -1.5
CTNND1-236ENST00000533667 PRTN3P24158 256 aa5.69□□□□□ -1.5
CTNND1-236ENST00000533667 MST1LQ2TV78 715 aa5.69□□□□□ -1.5
CTNND1-236ENST00000533667 Q8TCH9 128 aa5.69□□□□□ -1.5
CTNND1-236ENST00000533667 LAMTOR3Q9UHA4 124 aa5.69□□□□□ -1.5
CTNND1-236ENST00000533667 A0A1W2PRX2 142 aa5.69□□□□□ -1.5
CTNND1-236ENST00000533667 LGALS1P09382 135 aaKnown RBP5.69□□□□□ -1.5
CTNND1-236ENST00000533667 GATA4P43694 442 aa5.69□□□□□ -1.5
CTNND1-236ENST00000533667 YPEL3P61236 119 aaPredicted RBP5.69□□□□□ -1.5
CTNND1-236ENST00000533667 Q6ZRM9 215 aa5.69□□□□□ -1.5
CTNND1-236ENST00000533667 TRPM7Q96QT4 1865 aa5.69□□□□□ -1.5
CTNND1-236ENST00000533667 G3V4G9 280 aa5.69□□□□□ -1.5
CTNND1-236ENST00000533667 LINC00158P58513 81 aa5.69□□□□□ -1.5
CTNND1-236ENST00000533667 TRAV12-3A0A0B4J271 114 aa5.69□□□□□ -1.5
CTNND1-236ENST00000533667 IGKV3D-20A0A0C4DH25 116 aa5.69□□□□□ -1.5
CTNND1-236ENST00000533667 HTN3P15516 51 aa5.69□□□□□ -1.5
CTNND1-236ENST00000533667 RBX1P62877 108 aa5.69□□□□□ -1.5
CTNND1-236ENST00000533667 PRB3Q04118 309 aaPredicted RBP5.69□□□□□ -1.5
CTNND1-236ENST00000533667 CLUHP3Q96NS8 147 aa5.69□□□□□ -1.5
CTNND1-236ENST00000533667 TMEM14BQ9NUH8 114 aa5.69□□□□□ -1.5
CTNND1-236ENST00000533667 A0A0G2JNJ9 132 aa5.68□□□□□ -1.5
CTNND1-236ENST00000533667 MYMXA0A1B0GTQ4 84 aa5.68□□□□□ -1.5
CTNND1-236ENST00000533667 LILRA1O75019 489 aa5.68□□□□□ -1.5
CTNND1-236ENST00000533667 RNF144BQ7Z419 303 aa5.68□□□□□ -1.5
CTNND1-236ENST00000533667 C20orf173Q96LM9 149 aa5.68□□□□□ -1.5
CTNND1-236ENST00000533667 Q9UFV3 132 aa5.68□□□□□ -1.5
CTNND1-236ENST00000533667 A4D1N5 150 aa5.68□□□□□ -1.5
CTNND1-236ENST00000533667 INSP01308 110 aa5.68□□□□□ -1.5
CTNND1-236ENST00000533667 PFN1P07737 140 aaKnown RBP5.68□□□□□ -1.5
CTNND1-236ENST00000533667 CD33P20138 364 aa5.68□□□□□ -1.5
CTNND1-236ENST00000533667 NEGR1Q7Z3B1 354 aa5.68□□□□□ -1.5
CTNND1-236ENST00000533667 TMEM158Q8WZ71 300 aa5.68□□□□□ -1.5
CTNND1-236ENST00000533667 SLC25A16P16260 332 aa5.68□□□□□ -1.5
CTNND1-236ENST00000533667 FAM231DQ6ZW35 169 aa5.68□□□□□ -1.5
CTNND1-236ENST00000533667 ANKRD29Q8N6D5 301 aa5.68□□□□□ -1.5
CTNND1-236ENST00000533667 SDK2Q58EX2 2172 aa5.68□□□□□ -1.5
CTNND1-236ENST00000533667 ARHGEF17Q96PE2 2063 aaPredicted RBP5.68□□□□□ -1.5
CTNND1-236ENST00000533667 hDV102S1A0JD36 115 aa5.68□□□□□ -1.5
CTNND1-236ENST00000533667 ZC2HC1BQ5TFG8 222 aa5.68□□□□□ -1.5
CTNND1-236ENST00000533667 SFTA2Q6UW10 78 aa5.68□□□□□ -1.5
CTNND1-236ENST00000533667 LY6G5BQ8NDX9 201 aa5.68□□□□□ -1.5
CTNND1-236ENST00000533667 LIME1Q9H400 295 aa5.68□□□□□ -1.5
CTNND1-236ENST00000533667 DAZ1Q9NQZ3 744 aaKnown RBP5.68□□□□□ -1.5
CTNND1-236ENST00000533667 A0A087WX48 190 aa5.67□□□□□ -1.5
CTNND1-236ENST00000533667 PRSS46E5RG02 174 aa5.67□□□□□ -1.5
CTNND1-236ENST00000533667 GATA3P23771 443 aa5.67□□□□□ -1.5
CTNND1-236ENST00000533667 KLRD1Q13241 179 aa5.67□□□□□ -1.5
CTNND1-236ENST00000533667 STPG4Q8N801 248 aa5.67□□□□□ -1.5
CTNND1-236ENST00000533667 ZNF114Q8NC26 417 aa5.67□□□□□ -1.5
CTNND1-236ENST00000533667 FAM110DQ8TAY7 271 aaPredicted RBP5.67□□□□□ -1.5
CTNND1-236ENST00000533667 IGKV1-6A0A0C4DH72 117 aa5.67□□□□□ -1.5
CTNND1-236ENST00000533667 H3BUX3 64 aa5.67□□□□□ -1.5
CTNND1-236ENST00000533667 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.67□□□□□ -1.5
CTNND1-236ENST00000533667 VGLL1Q99990 258 aa5.67□□□□□ -1.5
CTNND1-236ENST00000533667 A0A1W2PPI3 338 aa5.67□□□□□ -1.5
CTNND1-236ENST00000533667 RHODO00212 210 aa5.67□□□□□ -1.5
CTNND1-236ENST00000533667 ZNF474Q6S9Z5 364 aaPredicted RBP5.67□□□□□ -1.5
CTNND1-236ENST00000533667 TRPT1Q86TN4 253 aaKnown RBP5.67□□□□□ -1.5
CTNND1-236ENST00000533667 LINC00311Q8N616 119 aa5.67□□□□□ -1.5
CTNND1-236ENST00000533667 DNAJC30Q96LL9 226 aa5.67□□□□□ -1.5
CTNND1-236ENST00000533667 C1orf147Q96MC9 270 aaPredicted RBP5.67□□□□□ -1.5
CTNND1-236ENST00000533667 JPT2Q9H910 190 aa5.67□□□□□ -1.5
CTNND1-236ENST00000533667 NDUFA4L2Q9NRX3 87 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms