RNA–Protein interactions for RNA: ENST00000533499.1

NXF1-216, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-216ENST00000533499 RAB24Q969Q5 203 aa13.03□□□□□ -0.32
NXF1-216ENST00000533499 FAM167A-AS1Q96KT0 104 aa13.03□□□□□ -0.32
NXF1-216ENST00000533499 C17orf77Q96MU5 243 aa13.03□□□□□ -0.32
NXF1-216ENST00000533499 TUBA4BQ9H853 241 aa13.03□□□□□ -0.32
NXF1-216ENST00000533499 MAP6D1Q9H9H5 199 aa13.03□□□□□ -0.32
NXF1-216ENST00000533499 H3BQ15 152 aa13.02□□□□□ -0.33
NXF1-216ENST00000533499 K7EIL1 84 aa13.02□□□□□ -0.33
NXF1-216ENST00000533499 MRPS12O15235 138 aaKnown RBP13.02□□□□□ -0.33
NXF1-216ENST00000533499 CMC4P56277 68 aaPredicted RBP13.02□□□□□ -0.33
NXF1-216ENST00000533499 ODF3L2Q3SX64 289 aa13.02□□□□□ -0.33
NXF1-216ENST00000533499 FAM213BQ8TBF2 198 aa13.02□□□□□ -0.33
NXF1-216ENST00000533499 TMEM14CQ9P0S9 112 aa13.02□□□□□ -0.33
NXF1-216ENST00000533499 HIST1H1EP10412 219 aaKnown RBP13.01□□□□□ -0.33
NXF1-216ENST00000533499 ZNF124Q15973 351 aa13.01□□□□□ -0.33
NXF1-216ENST00000533499 LCN15Q6UWW0 184 aa13.01□□□□□ -0.33
NXF1-216ENST00000533499 Q8N1Y9 231 aa13.01□□□□□ -0.33
NXF1-216ENST00000533499 RNF182Q8N6D2 247 aa13.01□□□□□ -0.33
NXF1-216ENST00000533499 RNF141Q8WVD5 230 aa13.01□□□□□ -0.33
NXF1-216ENST00000533499 HRH4Q9H3N8 390 aa13.01□□□□□ -0.33
NXF1-216ENST00000533499 SRD5A3Q9H8P0 318 aa13.01□□□□□ -0.33
NXF1-216ENST00000533499 ZNF586Q9NXT0 402 aa13.01□□□□□ -0.33
NXF1-216ENST00000533499 A0A087X0K7 114 aa13□□□□□ -0.33
NXF1-216ENST00000533499 ISLRO14498 428 aa13□□□□□ -0.33
NXF1-216ENST00000533499 ARL14EPLP0DKL9 152 aa13□□□□□ -0.33
NXF1-216ENST00000533499 IGLC2P0DOY2 106 aa13□□□□□ -0.33
NXF1-216ENST00000533499 PRB4P10163 310 aaPredicted RBP13□□□□□ -0.33
NXF1-216ENST00000533499 PSMB3P49720 205 aa13□□□□□ -0.33
NXF1-216ENST00000533499 FHITP49789 147 aa13□□□□□ -0.33
NXF1-216ENST00000533499 SAMD13Q5VXD3 122 aa13□□□□□ -0.33
NXF1-216ENST00000533499 PLA2G2EQ9NZK7 142 aa13□□□□□ -0.33
NXF1-216ENST00000533499 CTXND1A0A1B0GTU2 59 aa12.99□□□□□ -0.33
NXF1-216ENST00000533499 A0A1B0GV50 99 aa12.99□□□□□ -0.33
NXF1-216ENST00000533499 UMAD1C9J7I0 102 aa12.99□□□□□ -0.33
NXF1-216ENST00000533499 SLC17A3O00476 420 aa12.99□□□□□ -0.33
NXF1-216ENST00000533499 NBEAP1P0C6P0 100 aa12.99□□□□□ -0.33
NXF1-216ENST00000533499 HLA-DMBP28068 263 aa12.99□□□□□ -0.33
NXF1-216ENST00000533499 FGF8P55075 233 aaPredicted RBP12.99□□□□□ -0.33
NXF1-216ENST00000533499 GUK1Q16774 197 aa12.99□□□□□ -0.33
NXF1-216ENST00000533499 SSX7Q7RTT5 188 aa12.99□□□□□ -0.33
NXF1-216ENST00000533499 ZNF738Q8NE65 137 aa12.99□□□□□ -0.33
NXF1-216ENST00000533499 FXYD5Q96DB9 178 aa12.99□□□□□ -0.33
NXF1-216ENST00000533499 TRAV8-2A0A0B4J237 113 aa12.98□□□□□ -0.33
NXF1-216ENST00000533499 MAP1LC3B2A6NCE7 125 aa12.98□□□□□ -0.33
NXF1-216ENST00000533499 KNCNA6PVL3 124 aa12.98□□□□□ -0.33
NXF1-216ENST00000533499 SOCS3O14543 225 aa12.98□□□□□ -0.33
NXF1-216ENST00000533499 STAG3L2P0CL84 134 aa12.98□□□□□ -0.33
NXF1-216ENST00000533499 STAG3L3P0CL85 134 aa12.98□□□□□ -0.33
NXF1-216ENST00000533499 DEFB1P60022 68 aa12.98□□□□□ -0.33
NXF1-216ENST00000533499 ZNF726P1Q15940 193 aa12.98□□□□□ -0.33
NXF1-216ENST00000533499 PQLC2Q6ZP29 291 aa12.98□□□□□ -0.33
NXF1-216ENST00000533499 ZNF503Q96F45 646 aa12.98□□□□□ -0.33
NXF1-216ENST00000533499 C20orf173Q96LM9 149 aa12.98□□□□□ -0.33
NXF1-216ENST00000533499 SLC50A1Q9BRV3 221 aa12.98□□□□□ -0.33
NXF1-216ENST00000533499 MAP1LC3BQ9GZQ8 125 aa12.98□□□□□ -0.33
NXF1-216ENST00000533499 TRBV19A0A075B6N1 114 aa12.97□□□□□ -0.33
NXF1-216ENST00000533499 CXorf1O96002 111 aa12.97□□□□□ -0.33
NXF1-216ENST00000533499 IGHV4-30-4P0DP06 118 aa12.97□□□□□ -0.33
NXF1-216ENST00000533499 RPL35AP18077 110 aaKnown RBP12.97□□□□□ -0.33
NXF1-216ENST00000533499 GCHFRP30047 84 aa12.97□□□□□ -0.33
NXF1-216ENST00000533499 ACTL10Q5JWF8 245 aa12.97□□□□□ -0.33
NXF1-216ENST00000533499 FAM74A1Q5RGS3 127 aa12.97□□□□□ -0.33
NXF1-216ENST00000533499 ALKAL2Q6UX46 152 aa12.97□□□□□ -0.33
NXF1-216ENST00000533499 C19orf73Q9NVV2 129 aa12.97□□□□□ -0.33
NXF1-216ENST00000533499 RANP62826 216 aaKnown RBP12.96□□□□□ -0.33
NXF1-216ENST00000533499 PSG9Q00887 426 aa12.96□□□□□ -0.33
NXF1-216ENST00000533499 EXOC3-AS1Q8N2X6 119 aa12.96□□□□□ -0.33
NXF1-216ENST00000533499 SFT2D1Q8WV19 159 aa12.96□□□□□ -0.33
NXF1-216ENST00000533499 PHYHIPLQ96FC7 376 aa12.96□□□□□ -0.33
NXF1-216ENST00000533499 AAMDCQ9H7C9 122 aa12.96□□□□□ -0.33
NXF1-216ENST00000533499 ZNF331Q9NQX6 463 aaPredicted RBP12.96□□□□□ -0.33
NXF1-216ENST00000533499 DNAH3Q8TD57 4116 aa12.95□□□□□ -0.34
NXF1-216ENST00000533499 PSG3Q16557 428 aa12.95□□□□□ -0.34
NXF1-216ENST00000533499 EBLN2Q6P2I7 272 aa12.95□□□□□ -0.34
NXF1-216ENST00000533499 STHQ8IWL8 128 aa12.95□□□□□ -0.34
NXF1-216ENST00000533499 TMPRSS5Q9H3S3 457 aa12.95□□□□□ -0.34
NXF1-216ENST00000533499 ZNF705FA8MVS1 300 aaPredicted RBP12.94□□□□□ -0.34
NXF1-216ENST00000533499 F6UB75 175 aa12.94□□□□□ -0.34
NXF1-216ENST00000533499 NDUFB4O95168 129 aa12.94□□□□□ -0.34
NXF1-216ENST00000533499 IGKV3-20P01619 116 aa12.94□□□□□ -0.34
NXF1-216ENST00000533499 H2AFB1P0C5Y9 115 aa12.94□□□□□ -0.34
NXF1-216ENST00000533499 ICAM4Q14773 271 aa12.94□□□□□ -0.34
NXF1-216ENST00000533499 DPPA3Q6W0C5 159 aa12.94□□□□□ -0.34
NXF1-216ENST00000533499 RPUSD4Q96CM3 377 aaKnown RBP12.94□□□□□ -0.34
NXF1-216ENST00000533499 SAT2Q96F10 170 aaPredicted RBP12.94□□□□□ -0.34
NXF1-216ENST00000533499 CITED4Q96RK1 184 aa12.94□□□□□ -0.34
NXF1-216ENST00000533499 FAM110AQ9BQ89 295 aa12.94□□□□□ -0.34
NXF1-216ENST00000533499 TMEM167BQ9NRX6 74 aa12.94□□□□□ -0.34
NXF1-216ENST00000533499 AGRNO00468 2067 aa12.93□□□□□ -0.34
NXF1-216ENST00000533499 FRMD6-AS1P0C7T7 363 aa12.93□□□□□ -0.34
NXF1-216ENST00000533499 ZNF705DP0CH99 300 aaPredicted RBP12.93□□□□□ -0.34
NXF1-216ENST00000533499 ZNF705BP0CI00 300 aaPredicted RBP12.93□□□□□ -0.34
NXF1-216ENST00000533499 SULT1A2P50226 295 aa12.93□□□□□ -0.34
NXF1-216ENST00000533499 RAB5CP51148 216 aa12.93□□□□□ -0.34
NXF1-216ENST00000533499 UBE2G2P60604 165 aa12.93□□□□□ -0.34
NXF1-216ENST00000533499 PDE6HQ13956 83 aa12.93□□□□□ -0.34
NXF1-216ENST00000533499 OR4B1Q8NGF8 309 aa12.93□□□□□ -0.34
NXF1-216ENST00000533499 Q9H3A6 140 aa12.93□□□□□ -0.34
NXF1-216ENST00000533499 RPH3ALQ9UNE2 315 aa12.93□□□□□ -0.34
NXF1-216ENST00000533499 LOC102724200A0A096LPH7 203 aaPredicted RBP12.92□□□□□ -0.34
NXF1-216ENST00000533499 ZNF705EA8MWA4 302 aaPredicted RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms