RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 DEFB125Q8N687 156 aa8.43□□□□□ -1.06
TRAPPC4-213ENST00000533149 MARC2Q969Z3 335 aa8.43□□□□□ -1.06
TRAPPC4-213ENST00000533149 UHRF2Q96PU4 802 aa8.43□□□□□ -1.06
TRAPPC4-213ENST00000533149 OVOL2Q9BRP0 275 aa8.43□□□□□ -1.06
TRAPPC4-213ENST00000533149 SRD5A3Q9H8P0 318 aa8.43□□□□□ -1.06
TRAPPC4-213ENST00000533149 ZFAND3Q9H8U3 227 aa8.43□□□□□ -1.06
TRAPPC4-213ENST00000533149 MED9Q9NWA0 146 aa8.43□□□□□ -1.06
TRAPPC4-213ENST00000533149 PFDN2Q9UHV9 154 aa8.43□□□□□ -1.06
TRAPPC4-213ENST00000533149 MUC4Q99102 2169 aa8.42□□□□□ -1.06
TRAPPC4-213ENST00000533149 IGHV3OR16-8A0A075B7F1 116 aa8.42□□□□□ -1.06
TRAPPC4-213ENST00000533149 IZUMO1RA6ND01 250 aa8.42□□□□□ -1.06
TRAPPC4-213ENST00000533149 NDUFA4O00483 81 aa8.42□□□□□ -1.06
TRAPPC4-213ENST00000533149 STAG3L2P0CL84 134 aa8.42□□□□□ -1.06
TRAPPC4-213ENST00000533149 STAG3L3P0CL85 134 aa8.42□□□□□ -1.06
TRAPPC4-213ENST00000533149 ATF4P18848 351 aaPredicted RBP8.42□□□□□ -1.06
TRAPPC4-213ENST00000533149 TAS2R45P59539 299 aa8.42□□□□□ -1.06
TRAPPC4-213ENST00000533149 COMMD7Q86VX2 200 aa8.42□□□□□ -1.06
TRAPPC4-213ENST00000533149 FAM167A-AS1Q96KT0 104 aa8.42□□□□□ -1.06
TRAPPC4-213ENST00000533149 SLC25A39Q9BZJ4 359 aaPredicted RBP8.42□□□□□ -1.06
TRAPPC4-213ENST00000533149 TMPRSS5Q9H3S3 457 aa8.42□□□□□ -1.06
TRAPPC4-213ENST00000533149 RABAC1Q9UI14 185 aa8.42□□□□□ -1.06
TRAPPC4-213ENST00000533149 A0A0J9YWU9 116 aa8.41□□□□□ -1.06
TRAPPC4-213ENST00000533149 ZNF320A2RRD8 509 aa8.41□□□□□ -1.06
TRAPPC4-213ENST00000533149 OR11H12B2RN74 326 aa8.41□□□□□ -1.06
TRAPPC4-213ENST00000533149 ZNF207O43670 478 aaKnown RBP8.41□□□□□ -1.06
TRAPPC4-213ENST00000533149 CXorf1O96002 111 aa8.41□□□□□ -1.06
TRAPPC4-213ENST00000533149 CSN3P07498 182 aa8.41□□□□□ -1.06
TRAPPC4-213ENST00000533149 GCHFRP30047 84 aa8.41□□□□□ -1.06
TRAPPC4-213ENST00000533149 SYNJ2BPP57105 145 aa8.41□□□□□ -1.06
TRAPPC4-213ENST00000533149 FAM106AQ4KMX7 169 aa8.41□□□□□ -1.06
TRAPPC4-213ENST00000533149 S100A7AQ86SG5 101 aa8.41□□□□□ -1.06
TRAPPC4-213ENST00000533149 GPHB5Q86YW7 130 aa8.41□□□□□ -1.06
TRAPPC4-213ENST00000533149 IQCF2Q8IXL9 164 aa8.41□□□□□ -1.06
TRAPPC4-213ENST00000533149 ZNF503Q96F45 646 aa8.41□□□□□ -1.06
TRAPPC4-213ENST00000533149 SHANK2-AS3Q9BTD1 123 aa8.41□□□□□ -1.06
TRAPPC4-213ENST00000533149 C20orf24Q9BUV8 137 aa8.41□□□□□ -1.06
TRAPPC4-213ENST00000533149 SLC25A2Q9BXI2 301 aa8.41□□□□□ -1.06
TRAPPC4-213ENST00000533149 ZNF98A6NK75 572 aa8.4□□□□□ -1.06
TRAPPC4-213ENST00000533149 H3BRN7 92 aa8.4□□□□□ -1.06
TRAPPC4-213ENST00000533149 ARL14EPLP0DKL9 152 aa8.4□□□□□ -1.06
TRAPPC4-213ENST00000533149 NPPCP23582 126 aa8.4□□□□□ -1.06
TRAPPC4-213ENST00000533149 RPEL1Q2QD12 228 aa8.4□□□□□ -1.06
TRAPPC4-213ENST00000533149 LEMD1Q68G75 181 aa8.4□□□□□ -1.06
TRAPPC4-213ENST00000533149 UNQ9165/PRO28630Q6UXU0 137 aa8.4□□□□□ -1.06
TRAPPC4-213ENST00000533149 SCRT1Q9BWW7 348 aa8.4□□□□□ -1.06
TRAPPC4-213ENST00000533149 KRTAP4-5Q9BYR2 181 aa8.4□□□□□ -1.06
TRAPPC4-213ENST00000533149 A0A1B0GVY2 172 aa8.39□□□□□ -1.07
TRAPPC4-213ENST00000533149 RAB19A4D1S5 217 aa8.39□□□□□ -1.07
TRAPPC4-213ENST00000533149 OR7C2O60412 319 aa8.39□□□□□ -1.07
TRAPPC4-213ENST00000533149 CD7P09564 240 aa8.39□□□□□ -1.07
TRAPPC4-213ENST00000533149 S100A7P31151 101 aa8.39□□□□□ -1.07
TRAPPC4-213ENST00000533149 GUK1Q16774 197 aa8.39□□□□□ -1.07
TRAPPC4-213ENST00000533149 KHDC3LQ587J8 217 aa8.39□□□□□ -1.07
TRAPPC4-213ENST00000533149 PQLC2Q6ZP29 291 aa8.39□□□□□ -1.07
TRAPPC4-213ENST00000533149 WFDC3Q8IUB2 231 aa8.39□□□□□ -1.07
TRAPPC4-213ENST00000533149 STXBP6Q8NFX7 210 aa8.39□□□□□ -1.07
TRAPPC4-213ENST00000533149 METTL26Q96S19 204 aa8.39□□□□□ -1.07
TRAPPC4-213ENST00000533149 PAXXQ9BUH6 204 aa8.39□□□□□ -1.07
TRAPPC4-213ENST00000533149 OR51M1Q9H341 326 aa8.39□□□□□ -1.07
TRAPPC4-213ENST00000533149 GNG13Q9P2W3 67 aa8.39□□□□□ -1.07
TRAPPC4-213ENST00000533149 PEMTQ9UBM1 199 aa8.39□□□□□ -1.07
TRAPPC4-213ENST00000533149 U3KQE9 123 aa8.39□□□□□ -1.07
TRAPPC4-213ENST00000533149 IGHV3-49A0A0A0MS15 119 aa8.38□□□□□ -1.07
TRAPPC4-213ENST00000533149 RBFOX3A6NFN3 312 aa8.38□□□□□ -1.07
TRAPPC4-213ENST00000533149 K7EMT4 169 aa8.38□□□□□ -1.07
TRAPPC4-213ENST00000533149 APOHP02749 345 aaPredicted RBP8.38□□□□□ -1.07
TRAPPC4-213ENST00000533149 PYYP10082 97 aa8.38□□□□□ -1.07
TRAPPC4-213ENST00000533149 CRYBB3P26998 211 aa8.38□□□□□ -1.07
TRAPPC4-213ENST00000533149 BMI1P35226 326 aa8.38□□□□□ -1.07
TRAPPC4-213ENST00000533149 PSMB3P49720 205 aa8.38□□□□□ -1.07
TRAPPC4-213ENST00000533149 PPT1P50897 306 aa8.38□□□□□ -1.07
TRAPPC4-213ENST00000533149 TM4SF20Q53R12 229 aa8.38□□□□□ -1.07
TRAPPC4-213ENST00000533149 PHLDA1Q8WV24 401 aaPredicted RBP8.38□□□□□ -1.07
TRAPPC4-213ENST00000533149 TMEM190Q8WZ59 177 aa8.38□□□□□ -1.07
TRAPPC4-213ENST00000533149 FAM210AQ96ND0 272 aa8.38□□□□□ -1.07
TRAPPC4-213ENST00000533149 RARRES2Q99969 163 aa8.38□□□□□ -1.07
TRAPPC4-213ENST00000533149 TMEM167BQ9NRX6 74 aa8.38□□□□□ -1.07
TRAPPC4-213ENST00000533149 DNAH10Q8IVF4 4471 aa8.38□□□□□ -1.07
TRAPPC4-213ENST00000533149 IGHV3OR16-13A0A075B7E8 117 aa8.37□□□□□ -1.07
TRAPPC4-213ENST00000533149 IGHV3-74A0A0B4J1X5 117 aa8.37□□□□□ -1.07
TRAPPC4-213ENST00000533149 IGHV3-66A0A0C4DH42 116 aa8.37□□□□□ -1.07
TRAPPC4-213ENST00000533149 ZNF785A8K8V0 405 aa8.37□□□□□ -1.07
TRAPPC4-213ENST00000533149 BUB3O43684 328 aa8.37□□□□□ -1.07
TRAPPC4-213ENST00000533149 PAGE4O60829 102 aa8.37□□□□□ -1.07
TRAPPC4-213ENST00000533149 IFNA1P01562 189 aa8.37□□□□□ -1.07
TRAPPC4-213ENST00000533149 OR10J4P0C629 311 aa8.37□□□□□ -1.07
TRAPPC4-213ENST00000533149 SRSF3P84103 164 aaKnown RBP8.37□□□□□ -1.07
TRAPPC4-213ENST00000533149 PEA15Q15121 130 aa8.37□□□□□ -1.07
TRAPPC4-213ENST00000533149 CD300EQ496F6 205 aaPredicted RBP8.37□□□□□ -1.07
TRAPPC4-213ENST00000533149 TOR2AQ5JU69 321 aa8.37□□□□□ -1.07
TRAPPC4-213ENST00000533149 BPIFA4PQ86YQ2 179 aa8.37□□□□□ -1.07
TRAPPC4-213ENST00000533149 SUN5Q8TC36 379 aa8.37□□□□□ -1.07
TRAPPC4-213ENST00000533149 FXYD5Q96DB9 178 aa8.37□□□□□ -1.07
TRAPPC4-213ENST00000533149 EIF5A2Q9GZV4 153 aaKnown RBP8.37□□□□□ -1.07
TRAPPC4-213ENST00000533149 WFDC10AQ9H1F0 79 aa8.37□□□□□ -1.07
TRAPPC4-213ENST00000533149 TMEM14CQ9P0S9 112 aa8.37□□□□□ -1.07
TRAPPC4-213ENST00000533149 RNF24Q9Y225 148 aa8.37□□□□□ -1.07
TRAPPC4-213ENST00000533149 TP53TG1Q9Y2A0 90 aa8.37□□□□□ -1.07
TRAPPC4-213ENST00000533149 UFC1Q9Y3C8 167 aa8.37□□□□□ -1.07
TRAPPC4-213ENST00000533149 ABCA13Q86UQ4 5058 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms