RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 CCDC140Q96MF4 163 aa14.27□□□□□ -0.12
SMPD1-208ENST00000533123 CHRDL1Q9BU40 450 aa14.27□□□□□ -0.12
SMPD1-208ENST00000533123 MRPL27Q9P0M9 148 aaKnown RBP14.27□□□□□ -0.12
SMPD1-208ENST00000533123 ADIRFQ15847 76 aa14.27□□□□□ -0.13
SMPD1-208ENST00000533123 ARL2-SNX15V9GYD0 113 aa14.27□□□□□ -0.13
SMPD1-208ENST00000533123 TGOLN2O43493 480 aa14.26□□□□□ -0.13
SMPD1-208ENST00000533123 CLEC3BP05452 202 aa14.26□□□□□ -0.13
SMPD1-208ENST00000533123 GPR183P32249 361 aa14.26□□□□□ -0.13
SMPD1-208ENST00000533123 ADMP35318 185 aa14.26□□□□□ -0.13
SMPD1-208ENST00000533123 USF2Q15853 346 aaPredicted RBP14.26□□□□□ -0.13
SMPD1-208ENST00000533123 TCTEX1D4Q5JR98 221 aa14.26□□□□□ -0.13
SMPD1-208ENST00000533123 CLEC19AQ6UXS0 136 aa14.26□□□□□ -0.13
SMPD1-208ENST00000533123 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.26□□□□□ -0.13
SMPD1-208ENST00000533123 WIPF2Q8TF74 440 aaPredicted RBP14.26□□□□□ -0.13
SMPD1-208ENST00000533123 OR5B12Q96R08 314 aa14.26□□□□□ -0.13
SMPD1-208ENST00000533123 TRBV20OR9-2A0A075B6H5 130 aa14.26□□□□□ -0.13
SMPD1-208ENST00000533123 TRBV24-1A0A075B6N3 115 aa14.26□□□□□ -0.13
SMPD1-208ENST00000533123 IGHV3-35A0A0C4DH35 117 aa14.26□□□□□ -0.13
SMPD1-208ENST00000533123 A0A0G2JLM5 398 aa14.26□□□□□ -0.13
SMPD1-208ENST00000533123 WI2-2373I1.2A0A1W2PRP0 233 aa14.26□□□□□ -0.13
SMPD1-208ENST00000533123 CLPSL1A2RUU4 121 aa14.26□□□□□ -0.13
SMPD1-208ENST00000533123 GP9P14770 177 aa14.26□□□□□ -0.13
SMPD1-208ENST00000533123 RPL23P62829 140 aaKnown RBP14.26□□□□□ -0.13
SMPD1-208ENST00000533123 C11orf44Q8N8P7 122 aa14.26□□□□□ -0.13
SMPD1-208ENST00000533123 AURKAIP1Q9NWT8 199 aaPredicted RBP14.26□□□□□ -0.13
SMPD1-208ENST00000533123 TRBV7-1A0A0A6YYK4 115 aa14.25□□□□□ -0.13
SMPD1-208ENST00000533123 A0A1W2PRE2 83 aa14.25□□□□□ -0.13
SMPD1-208ENST00000533123 PGPEP1LA6NFU8 196 aa14.25□□□□□ -0.13
SMPD1-208ENST00000533123 H3BTX0 84 aa14.25□□□□□ -0.13
SMPD1-208ENST00000533123 PKIAP61925 76 aa14.25□□□□□ -0.13
SMPD1-208ENST00000533123 SUMO1P63165 101 aaKnown RBP14.25□□□□□ -0.13
SMPD1-208ENST00000533123 RNF152Q8N8N0 203 aa14.25□□□□□ -0.13
SMPD1-208ENST00000533123 BLNKQ8WV28 456 aa14.25□□□□□ -0.13
SMPD1-208ENST00000533123 PACRGQ96M98 296 aaPredicted RBP14.25□□□□□ -0.13
SMPD1-208ENST00000533123 HIST1H2BLQ99880 126 aa14.25□□□□□ -0.13
SMPD1-208ENST00000533123 OR4X2Q8NGF9 303 aa14.25□□□□□ -0.13
SMPD1-208ENST00000533123 C11orf52Q96A22 123 aa14.25□□□□□ -0.13
SMPD1-208ENST00000533123 TXN2Q99757 166 aa14.25□□□□□ -0.13
SMPD1-208ENST00000533123 IGHV3OR16-8A0A075B7F1 116 aa14.24□□□□□ -0.13
SMPD1-208ENST00000533123 CRYBB3P26998 211 aa14.24□□□□□ -0.13
SMPD1-208ENST00000533123 DDTP30046 118 aa14.24□□□□□ -0.13
SMPD1-208ENST00000533123 FCGR2BP31994 310 aaPredicted RBP14.24□□□□□ -0.13
SMPD1-208ENST00000533123 PROK1P58294 105 aa14.24□□□□□ -0.13
SMPD1-208ENST00000533123 SSTP61278 116 aa14.24□□□□□ -0.13
SMPD1-208ENST00000533123 PRIMA1Q86XR5 153 aa14.24□□□□□ -0.13
SMPD1-208ENST00000533123 STXBP6Q8NFX7 210 aa14.24□□□□□ -0.13
SMPD1-208ENST00000533123 MYOZ3Q8TDC0 251 aa14.24□□□□□ -0.13
SMPD1-208ENST00000533123 ZNF414Q96IQ9 312 aa14.24□□□□□ -0.13
SMPD1-208ENST00000533123 TRBV12-3P01733 135 aa14.23□□□□□ -0.13
SMPD1-208ENST00000533123 REC114Q7Z4M0 266 aa14.23□□□□□ -0.13
SMPD1-208ENST00000533123 SHANK2-AS3Q9BTD1 123 aa14.23□□□□□ -0.13
SMPD1-208ENST00000533123 ELOVL1Q9BW60 279 aa14.23□□□□□ -0.13
SMPD1-208ENST00000533123 GNB4Q9HAV0 340 aa14.23□□□□□ -0.13
SMPD1-208ENST00000533123 PPP5D1E7EU14 171 aa14.23□□□□□ -0.13
SMPD1-208ENST00000533123 H3BRN7 92 aa14.23□□□□□ -0.13
SMPD1-208ENST00000533123 A0A1B0GV90 55 aa14.22□□□□□ -0.13
SMPD1-208ENST00000533123 CD28P10747 220 aa14.22□□□□□ -0.13
SMPD1-208ENST00000533123 RANP62826 216 aaKnown RBP14.22□□□□□ -0.13
SMPD1-208ENST00000533123 KHDC1LQ5JSQ8 128 aa14.22□□□□□ -0.13
SMPD1-208ENST00000533123 LINC01551Q86U37 167 aa14.22□□□□□ -0.13
SMPD1-208ENST00000533123 UBE2E2Q96LR5 201 aa14.22□□□□□ -0.13
SMPD1-208ENST00000533123 PRO1933Q9H354 126 aa14.22□□□□□ -0.13
SMPD1-208ENST00000533123 TENM1Q9UKZ4 2725 aa14.22□□□□□ -0.13
SMPD1-208ENST00000533123 TSTD3H0UI37 97 aa14.22□□□□□ -0.13
SMPD1-208ENST00000533123 CTDSP1Q9GZU7 261 aa14.22□□□□□ -0.13
SMPD1-208ENST00000533123 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.21□□□□□ -0.13
SMPD1-208ENST00000533123 NBEAP1P0C6P0 100 aa14.21□□□□□ -0.13
SMPD1-208ENST00000533123 C18orf65Q6ZTR6 163 aa14.21□□□□□ -0.13
SMPD1-208ENST00000533123 FBN1P35555 2871 aaKnown RBP14.21□□□□□ -0.13
SMPD1-208ENST00000533123 SCGB2A1O75556 95 aa14.2□□□□□ -0.14
SMPD1-208ENST00000533123 TMEM183AQ8IXX5 376 aa14.2□□□□□ -0.14
SMPD1-208ENST00000533123 ZNF586Q9NXT0 402 aa14.2□□□□□ -0.14
SMPD1-208ENST00000533123 ARL3P36405 182 aa14.19□□□□□ -0.14
SMPD1-208ENST00000533123 MYCNOSP40205 109 aa14.19□□□□□ -0.14
SMPD1-208ENST00000533123 TMEM14CQ9P0S9 112 aa14.19□□□□□ -0.14
SMPD1-208ENST00000533123 PEF1Q9UBV8 284 aaKnown RBP14.19□□□□□ -0.14
SMPD1-208ENST00000533123 GNG5P63218 68 aa14.19□□□□□ -0.14
SMPD1-208ENST00000533123 JOSD1Q15040 202 aaPredicted RBP14.19□□□□□ -0.14
SMPD1-208ENST00000533123 LINC00479Q96M42 142 aa14.19□□□□□ -0.14
SMPD1-208ENST00000533123 ATP6V0BQ99437 205 aa14.19□□□□□ -0.14
SMPD1-208ENST00000533123 CITED2Q99967 270 aaPredicted RBP14.19□□□□□ -0.14
SMPD1-208ENST00000533123 SRD5A3Q9H8P0 318 aa14.19□□□□□ -0.14
SMPD1-208ENST00000533123 A0A1B0GUS0 222 aa14.18□□□□□ -0.14
SMPD1-208ENST00000533123 PFN1P07737 140 aaKnown RBP14.18□□□□□ -0.14
SMPD1-208ENST00000533123 KRTAP10-3P60369 221 aa14.18□□□□□ -0.14
SMPD1-208ENST00000533123 FOXL1Q12952 345 aa14.18□□□□□ -0.14
SMPD1-208ENST00000533123 KRTAP24-1Q3LI83 254 aa14.18□□□□□ -0.14
SMPD1-208ENST00000533123 TOMM20LQ6UXN7 152 aa14.18□□□□□ -0.14
SMPD1-208ENST00000533123 OCC1Q8TAD7 63 aa14.18□□□□□ -0.14
SMPD1-208ENST00000533123 PYGO2Q9BRQ0 406 aa14.18□□□□□ -0.14
SMPD1-208ENST00000533123 HELTA6NFD8 242 aa14.18□□□□□ -0.14
SMPD1-208ENST00000533123 LGALS1P09382 135 aaKnown RBP14.18□□□□□ -0.14
SMPD1-208ENST00000533123 C17orf77Q96MU5 243 aa14.18□□□□□ -0.14
SMPD1-208ENST00000533123 ZFAND3Q9H8U3 227 aa14.18□□□□□ -0.14
SMPD1-208ENST00000533123 PGPA6NDG6 321 aa14.17□□□□□ -0.14
SMPD1-208ENST00000533123 BMPR1BO00238 502 aa14.17□□□□□ -0.14
SMPD1-208ENST00000533123 AMBPP02760 352 aa14.17□□□□□ -0.14
SMPD1-208ENST00000533123 GZMBP10144 247 aa14.17□□□□□ -0.14
SMPD1-208ENST00000533123 CENPWQ5EE01 88 aa14.17□□□□□ -0.14
SMPD1-208ENST00000533123 BPIFA4PQ86YQ2 179 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms