RNA–Protein interactions for RNA: ENST00000532504.5

PPFIA1-222, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 1 (best)

Gene PPFIA1, Length 5,159 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-222ENST00000532504 DEFB130BP0DP73 79 aa12.45□□□□□ -0.42
PPFIA1-222ENST00000532504 DEFB130AP0DP74 79 aa12.45□□□□□ -0.42
PPFIA1-222ENST00000532504 HOXD3P31249 432 aaPredicted RBP12.45□□□□□ -0.42
PPFIA1-222ENST00000532504 ERCC8Q13216 396 aa12.45□□□□□ -0.42
PPFIA1-222ENST00000532504 MCRIP2Q9BUT9 160 aaKnown RBP12.45□□□□□ -0.42
PPFIA1-222ENST00000532504 HSPB8Q9UJY1 196 aa12.45□□□□□ -0.42
PPFIA1-222ENST00000532504 HIGD1CA8MV81 97 aa12.45□□□□□ -0.42
PPFIA1-222ENST00000532504 YPEL3P61236 119 aaPredicted RBP12.45□□□□□ -0.42
PPFIA1-222ENST00000532504 RCHY1Q96PM5 261 aa12.45□□□□□ -0.42
PPFIA1-222ENST00000532504 C1QTNF4Q9BXJ3 329 aa12.45□□□□□ -0.42
PPFIA1-222ENST00000532504 CYTL1Q9NRR1 136 aa12.45□□□□□ -0.42
PPFIA1-222ENST00000532504 NDUFA4O00483 81 aa12.44□□□□□ -0.42
PPFIA1-222ENST00000532504 KRTAP10-9P60411 292 aa12.44□□□□□ -0.42
PPFIA1-222ENST00000532504 ZNF415Q09FC8 603 aa12.44□□□□□ -0.42
PPFIA1-222ENST00000532504 TMEM191AQ9H0A3 160 aa12.44□□□□□ -0.42
PPFIA1-222ENST00000532504 CA1P00915 261 aaPredicted RBP12.44□□□□□ -0.42
PPFIA1-222ENST00000532504 TCRAP04437 139 aa12.44□□□□□ -0.42
PPFIA1-222ENST00000532504 UBE2DNLQ8IWF7 75 aa12.44□□□□□ -0.42
PPFIA1-222ENST00000532504 DYSFO75923 2080 aa12.44□□□□□ -0.42
PPFIA1-222ENST00000532504 CRXO43186 299 aaPredicted RBP12.44□□□□□ -0.42
PPFIA1-222ENST00000532504 INSP01308 110 aa12.44□□□□□ -0.42
PPFIA1-222ENST00000532504 PSG3Q16557 428 aa12.44□□□□□ -0.42
PPFIA1-222ENST00000532504 TTC9CQ8N5M4 171 aa12.44□□□□□ -0.42
PPFIA1-222ENST00000532504 PKD1L2Q7Z442 2459 aa12.44□□□□□ -0.42
PPFIA1-222ENST00000532504 ZNF324O75467 553 aaPredicted RBP12.43□□□□□ -0.42
PPFIA1-222ENST00000532504 SLURP1P55000 103 aa12.43□□□□□ -0.42
PPFIA1-222ENST00000532504 TMEM136Q6ZRR5 245 aa12.43□□□□□ -0.42
PPFIA1-222ENST00000532504 GZMBP10144 247 aa12.43□□□□□ -0.42
PPFIA1-222ENST00000532504 MBD3L1Q8WWY6 194 aa12.43□□□□□ -0.42
PPFIA1-222ENST00000532504 DEFA6Q01524 100 aa12.43□□□□□ -0.42
PPFIA1-222ENST00000532504 TMEM97Q5BJF2 176 aa12.43□□□□□ -0.42
PPFIA1-222ENST00000532504 OCC1Q8TAD7 63 aa12.43□□□□□ -0.42
PPFIA1-222ENST00000532504 CHD7Q9P2D1 2997 aa12.43□□□□□ -0.42
PPFIA1-222ENST00000532504 COL5A1P20908 1838 aaPredicted RBP12.43□□□□□ -0.42
PPFIA1-222ENST00000532504 DNAJC9-AS1A6NH13 148 aa12.42□□□□□ -0.42
PPFIA1-222ENST00000532504 IGLV1-47P01700 117 aa12.42□□□□□ -0.42
PPFIA1-222ENST00000532504 SPINK13Q1W4C9 94 aa12.42□□□□□ -0.42
PPFIA1-222ENST00000532504 Q8N9W7 124 aa12.42□□□□□ -0.42
PPFIA1-222ENST00000532504 PRELID3AQ96N28 172 aa12.42□□□□□ -0.42
PPFIA1-222ENST00000532504 IGLC7A0M8Q6 106 aa12.42□□□□□ -0.42
PPFIA1-222ENST00000532504 SRSF3P84103 164 aaKnown RBP12.42□□□□□ -0.42
PPFIA1-222ENST00000532504 AP5S1Q9NUS5 200 aa12.42□□□□□ -0.42
PPFIA1-222ENST00000532504 IL36BQ9NZH7 164 aa12.42□□□□□ -0.42
PPFIA1-222ENST00000532504 PAX9P55771 341 aa12.42□□□□□ -0.42
PPFIA1-222ENST00000532504 RPL23P62829 140 aaKnown RBP12.42□□□□□ -0.42
PPFIA1-222ENST00000532504 LINC00477Q96M19 166 aa12.42□□□□□ -0.42
PPFIA1-222ENST00000532504 KNCNA6PVL3 124 aa12.41□□□□□ -0.42
PPFIA1-222ENST00000532504 C11orf71Q6IPW1 123 aa12.41□□□□□ -0.42
PPFIA1-222ENST00000532504 C1QL4Q86Z23 238 aa12.41□□□□□ -0.42
PPFIA1-222ENST00000532504 IQCJQ1A5X6 159 aa12.41□□□□□ -0.42
PPFIA1-222ENST00000532504 C5orf56Q8N8D9 126 aa12.41□□□□□ -0.42
PPFIA1-222ENST00000532504 LGALS1P09382 135 aaKnown RBP12.41□□□□□ -0.42
PPFIA1-222ENST00000532504 TMEM101Q96IK0 257 aa12.41□□□□□ -0.42
PPFIA1-222ENST00000532504 SOX21Q9Y651 276 aaPredicted RBP12.41□□□□□ -0.42
PPFIA1-222ENST00000532504 LYPD6Q86Y78 171 aa12.41□□□□□ -0.42
PPFIA1-222ENST00000532504 IMMP2LQ96T52 175 aa12.41□□□□□ -0.42
PPFIA1-222ENST00000532504 DERL1Q9BUN8 251 aa12.41□□□□□ -0.42
PPFIA1-222ENST00000532504 PRR31Q5SQ13 230 aa12.41□□□□□ -0.42
PPFIA1-222ENST00000532504 PRSS57Q6UWY2 283 aa12.41□□□□□ -0.42
PPFIA1-222ENST00000532504 OR4C5Q8NGB2 326 aa12.41□□□□□ -0.42
PPFIA1-222ENST00000532504 DEFB104AQ8WTQ1 72 aa12.41□□□□□ -0.42
PPFIA1-222ENST00000532504 A0A1B0GUS0 222 aa12.4□□□□□ -0.42
PPFIA1-222ENST00000532504 FOLR2P14207 255 aa12.4□□□□□ -0.42
PPFIA1-222ENST00000532504 SRSF2Q01130 221 aaKnown RBP12.4□□□□□ -0.42
PPFIA1-222ENST00000532504 POU2AF1Q16633 256 aa12.4□□□□□ -0.42
PPFIA1-222ENST00000532504 TMEM158Q8WZ71 300 aa12.4□□□□□ -0.42
PPFIA1-222ENST00000532504 MRPL27Q9P0M9 148 aaKnown RBP12.4□□□□□ -0.42
PPFIA1-222ENST00000532504 NUP210LQ5VU65 1888 aa12.4□□□□□ -0.42
PPFIA1-222ENST00000532504 USP9YO00507 2555 aaPredicted RBP12.4□□□□□ -0.42
PPFIA1-222ENST00000532504 USP9XQ93008 2570 aaPredicted RBP12.4□□□□□ -0.42
PPFIA1-222ENST00000532504 LY6G6DO95868 133 aa12.4□□□□□ -0.42
PPFIA1-222ENST00000532504 FNDC10F2Z333 226 aa12.4□□□□□ -0.43
PPFIA1-222ENST00000532504 HAPLN4Q86UW8 402 aa12.4□□□□□ -0.43
PPFIA1-222ENST00000532504 GEMIN7Q9H840 131 aaKnown RBP12.4□□□□□ -0.43
PPFIA1-222ENST00000532504 FOXE3Q13461 319 aa12.39□□□□□ -0.43
PPFIA1-222ENST00000532504 SSBP4Q9BWG4 385 aaPredicted RBP12.39□□□□□ -0.43
PPFIA1-222ENST00000532504 CD5LO43866 347 aa12.39□□□□□ -0.43
PPFIA1-222ENST00000532504 IGLC1P0CG04 106 aa12.39□□□□□ -0.43
PPFIA1-222ENST00000532504 NPBQ8NG41 125 aa12.39□□□□□ -0.43
PPFIA1-222ENST00000532504 SSBP2P81877 361 aaPredicted RBP12.39□□□□□ -0.43
PPFIA1-222ENST00000532504 C18orf15Q96N68 181 aa12.39□□□□□ -0.43
PPFIA1-222ENST00000532504 FNDC4Q9H6D8 234 aaPredicted RBP12.39□□□□□ -0.43
PPFIA1-222ENST00000532504 ABCA12Q86UK0 2595 aa12.39□□□□□ -0.43
PPFIA1-222ENST00000532504 LINC00479Q96M42 142 aa12.39□□□□□ -0.43
PPFIA1-222ENST00000532504 LAMA3Q16787 3333 aa12.38□□□□□ -0.43
PPFIA1-222ENST00000532504 IGHV7-4-1A0A0J9YVY3 117 aa12.38□□□□□ -0.43
PPFIA1-222ENST00000532504 H3BUA1 57 aa12.38□□□□□ -0.43
PPFIA1-222ENST00000532504 Q6AWC8 147 aa12.38□□□□□ -0.43
PPFIA1-222ENST00000532504 CLPSL1A2RUU4 121 aa12.38□□□□□ -0.43
PPFIA1-222ENST00000532504 SNCGO76070 127 aa12.38□□□□□ -0.43
PPFIA1-222ENST00000532504 SUMO2P61956 95 aaKnown RBP12.38□□□□□ -0.43
PPFIA1-222ENST00000532504 OR10J3Q5JRS4 329 aa12.38□□□□□ -0.43
PPFIA1-222ENST00000532504 CFHR3Q02985 330 aa12.38□□□□□ -0.43
PPFIA1-222ENST00000532504 NCKAP5O14513 1909 aa12.37□□□□□ -0.43
PPFIA1-222ENST00000532504 LEPROTL1O95214 131 aa12.37□□□□□ -0.43
PPFIA1-222ENST00000532504 HNRNPA3P51991 378 aaKnown RBP12.37□□□□□ -0.43
PPFIA1-222ENST00000532504 TRAV12-2A0A075B6T6 113 aa12.37□□□□□ -0.43
PPFIA1-222ENST00000532504 OR9G4Q8NGQ1 327 aa12.37□□□□□ -0.43
PPFIA1-222ENST00000532504 MIEN1Q9BRT3 115 aa12.37□□□□□ -0.43
PPFIA1-222ENST00000532504 CITED2Q99967 270 aaPredicted RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms