RNA–Protein interactions for RNA: ENST00000531858.1

AC055878.1-201, humanhuman

TSL 3 BASIC

Gene AC055878.1, Length 281 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055878.1-201ENST00000531858 ROMO1P60602 79 aa2.39□□□□□ -2.03
AC055878.1-201ENST00000531858 HES1Q14469 280 aa2.39□□□□□ -2.03
AC055878.1-201ENST00000531858 TAF9Q16594 264 aa2.39□□□□□ -2.03
AC055878.1-201ENST00000531858 ATOH7Q8N100 152 aa2.39□□□□□ -2.03
AC055878.1-201ENST00000531858 C20orf166-AS1Q96NR2 134 aa2.39□□□□□ -2.03
AC055878.1-201ENST00000531858 NAIPQ13075 1403 aa2.39□□□□□ -2.03
AC055878.1-201ENST00000531858 EIF4G3O43432 1585 aaKnown RBP2.39□□□□□ -2.03
AC055878.1-201ENST00000531858 FRMPD1Q5SYB0 1578 aa2.39□□□□□ -2.03
AC055878.1-201ENST00000531858 UHRF1BP1LA0JNW5 1464 aa2.39□□□□□ -2.03
AC055878.1-201ENST00000531858 SMARCA4P51532 1647 aa2.39□□□□□ -2.03
AC055878.1-201ENST00000531858 NACAE9PAV3 2078 aa2.38□□□□□ -2.03
AC055878.1-201ENST00000531858 KDM5BQ9UGL1 1544 aa2.38□□□□□ -2.03
AC055878.1-201ENST00000531858 A0A087WSZ3 146 aa2.38□□□□□ -2.03
AC055878.1-201ENST00000531858 ZNF670-ZNF695F2Z2N8 137 aa2.38□□□□□ -2.03
AC055878.1-201ENST00000531858 GNG7O60262 68 aa2.38□□□□□ -2.03
AC055878.1-201ENST00000531858 GUCA1AP43080 201 aaPredicted RBP2.38□□□□□ -2.03
AC055878.1-201ENST00000531858 PLGLB1Q02325 96 aa2.38□□□□□ -2.03
AC055878.1-201ENST00000531858 DIAPH2-AS1Q14236 149 aa2.38□□□□□ -2.03
AC055878.1-201ENST00000531858 NEDD8Q15843 81 aa2.38□□□□□ -2.03
AC055878.1-201ENST00000531858 ARHGAP31Q2M1Z3 1444 aa2.38□□□□□ -2.03
AC055878.1-201ENST00000531858 IGFL1Q6UW32 110 aa2.38□□□□□ -2.03
AC055878.1-201ENST00000531858 SH2D6Q7Z4S9 175 aa2.38□□□□□ -2.03
AC055878.1-201ENST00000531858 RPS19BP1Q86WX3 136 aaKnown RBP2.38□□□□□ -2.03
AC055878.1-201ENST00000531858 Q8IYB0 196 aa2.38□□□□□ -2.03
AC055878.1-201ENST00000531858 LINC00301Q8NCQ3 95 aa2.38□□□□□ -2.03
AC055878.1-201ENST00000531858 HYLS1Q96M11 299 aa2.38□□□□□ -2.03
AC055878.1-201ENST00000531858 ZNF106Q9H2Y7 1883 aaKnown RBP2.38□□□□□ -2.03
AC055878.1-201ENST00000531858 TPRKBQ9Y3C4 175 aa2.38□□□□□ -2.03
AC055878.1-201ENST00000531858 LHFPL6Q9Y693 200 aa2.38□□□□□ -2.03
AC055878.1-201ENST00000531858 MRC2Q9UBG0 1479 aa2.38□□□□□ -2.03
AC055878.1-201ENST00000531858 ECM29Q5VYK3 1845 aa2.38□□□□□ -2.03
AC055878.1-201ENST00000531858 IBTKQ9P2D0 1353 aaPredicted RBP2.37□□□□□ -2.03
AC055878.1-201ENST00000531858 SHANK3Q9BYB0 1731 aa2.37□□□□□ -2.03
AC055878.1-201ENST00000531858 SMARCA2P51531 1590 aa2.37□□□□□ -2.03
AC055878.1-201ENST00000531858 CDC42EP2O14613 210 aa2.37□□□□□ -2.03
AC055878.1-201ENST00000531858 UBL3O95164 117 aa2.37□□□□□ -2.03
AC055878.1-201ENST00000531858 IGKV3-11P04433 115 aa2.37□□□□□ -2.03
AC055878.1-201ENST00000531858 FGF7P21781 194 aa2.37□□□□□ -2.03
AC055878.1-201ENST00000531858 DSCR4P56555 118 aaPredicted RBP2.37□□□□□ -2.03
AC055878.1-201ENST00000531858 SCIMPQ6UWF3 145 aa2.37□□□□□ -2.03
AC055878.1-201ENST00000531858 OR4X2Q8NGF9 303 aa2.37□□□□□ -2.03
AC055878.1-201ENST00000531858 POP5Q969H6 163 aaKnown RBP2.37□□□□□ -2.03
AC055878.1-201ENST00000531858 C12orf57Q99622 126 aa2.37□□□□□ -2.03
AC055878.1-201ENST00000531858 SLC50A1Q9BRV3 221 aa2.37□□□□□ -2.03
AC055878.1-201ENST00000531858 SAR1AQ9NR31 198 aa2.37□□□□□ -2.03
AC055878.1-201ENST00000531858 METTL1Q9UBP6 276 aaKnown RBP2.37□□□□□ -2.03
AC055878.1-201ENST00000531858 GNG8Q9UK08 70 aa2.37□□□□□ -2.03
AC055878.1-201ENST00000531858 XIRP1Q702N8 1843 aaKnown RBP2.37□□□□□ -2.03
AC055878.1-201ENST00000531858 MYOM3Q5VTT5 1437 aa2.36□□□□□ -2.03
AC055878.1-201ENST00000531858 IGKV1D-42A0A075B6H8 117 aa2.36□□□□□ -2.03
AC055878.1-201ENST00000531858 IGKV2-24A0A0C4DH68 120 aa2.36□□□□□ -2.03
AC055878.1-201ENST00000531858 hDV103S1A0JD37 113 aa2.36□□□□□ -2.03
AC055878.1-201ENST00000531858 IBA57-AS1B1ANH7 110 aa2.36□□□□□ -2.03
AC055878.1-201ENST00000531858 TRACP01848 142 aa2.36□□□□□ -2.03
AC055878.1-201ENST00000531858 ETV6P41212 452 aa2.36□□□□□ -2.03
AC055878.1-201ENST00000531858 KRTAP10-12P60413 245 aa2.36□□□□□ -2.03
AC055878.1-201ENST00000531858 BTG2P78543 158 aa2.36□□□□□ -2.03
AC055878.1-201ENST00000531858 RNASE10Q5GAN6 216 aaKnown RBP2.36□□□□□ -2.03
AC055878.1-201ENST00000531858 GLIPR1L1Q6UWM5 242 aa2.36□□□□□ -2.03
AC055878.1-201ENST00000531858 KRTAP5-2Q701N4 177 aa2.36□□□□□ -2.03
AC055878.1-201ENST00000531858 TVP23CQ96ET8 276 aa2.36□□□□□ -2.03
AC055878.1-201ENST00000531858 OR4C12Q96R67 309 aa2.36□□□□□ -2.03
AC055878.1-201ENST00000531858 PDCD10Q9BUL8 212 aa2.36□□□□□ -2.03
AC055878.1-201ENST00000531858 SLC35B3Q9H1N7 401 aa2.36□□□□□ -2.03
AC055878.1-201ENST00000531858 FGD6Q6ZV73 1430 aa2.35□□□□□ -2.03
AC055878.1-201ENST00000531858 C9orf170A2RU37 121 aa2.35□□□□□ -2.03
AC055878.1-201ENST00000531858 E7EUB6 86 aa2.35□□□□□ -2.03
AC055878.1-201ENST00000531858 ATP6V1G2-DDX39BF2Z307 99 aa2.35□□□□□ -2.03
AC055878.1-201ENST00000531858 M0R233 179 aa2.35□□□□□ -2.03
AC055878.1-201ENST00000531858 ZNF737O75373 536 aa2.35□□□□□ -2.03
AC055878.1-201ENST00000531858 IGLV1-51P01701 117 aa2.35□□□□□ -2.03
AC055878.1-201ENST00000531858 MGST1P10620 155 aaKnown RBP2.35□□□□□ -2.03
AC055878.1-201ENST00000531858 ZNF25P17030 456 aaPredicted RBP2.35□□□□□ -2.03
AC055878.1-201ENST00000531858 OCIAD2Q56VL3 154 aa2.35□□□□□ -2.03
AC055878.1-201ENST00000531858 IZUMO2Q6UXV1 221 aa2.35□□□□□ -2.03
AC055878.1-201ENST00000531858 C10orf111Q8N326 155 aa2.35□□□□□ -2.03
AC055878.1-201ENST00000531858 Q8N814 137 aa2.35□□□□□ -2.03
AC055878.1-201ENST00000531858 OR2T35Q8NGX2 323 aa2.35□□□□□ -2.03
AC055878.1-201ENST00000531858 MUCL1Q96DR8 90 aa2.35□□□□□ -2.03
AC055878.1-201ENST00000531858 NIT2Q9NQR4 276 aa2.35□□□□□ -2.03
AC055878.1-201ENST00000531858 COMMD3Q9UBI1 195 aa2.35□□□□□ -2.03
AC055878.1-201ENST00000531858 DNAJC15Q9Y5T4 150 aa2.35□□□□□ -2.03
AC055878.1-201ENST00000531858 SOX21Q9Y651 276 aaPredicted RBP2.35□□□□□ -2.03
AC055878.1-201ENST00000531858 CACNA1SQ13698 1873 aa2.35□□□□□ -2.03
AC055878.1-201ENST00000531858 CCNB3Q8WWL7 1395 aa2.35□□□□□ -2.03
AC055878.1-201ENST00000531858 ATRXP46100 2492 aa2.34□□□□□ -2.03
AC055878.1-201ENST00000531858 COL1A1P02452 1464 aaPredicted RBP2.34□□□□□ -2.03
AC055878.1-201ENST00000531858 VIRMAQ69YN4 1812 aaKnown RBP2.34□□□□□ -2.03
AC055878.1-201ENST00000531858 TRBV20-1A0A075B6N2 111 aa2.34□□□□□ -2.03
AC055878.1-201ENST00000531858 A0A1B0GVY2 172 aa2.34□□□□□ -2.03
AC055878.1-201ENST00000531858 ZNF705FA8MVS1 300 aaPredicted RBP2.34□□□□□ -2.03
AC055878.1-201ENST00000531858 F6UZH7 168 aa2.34□□□□□ -2.03
AC055878.1-201ENST00000531858 RBP4P02753 201 aa2.34□□□□□ -2.03
AC055878.1-201ENST00000531858 SMIM6P0DI80 62 aa2.34□□□□□ -2.03
AC055878.1-201ENST00000531858 AZU1P20160 251 aa2.34□□□□□ -2.03
AC055878.1-201ENST00000531858 SNRPD3P62318 126 aaKnown RBP2.34□□□□□ -2.03
AC055878.1-201ENST00000531858 BLCAPP62952 87 aa2.34□□□□□ -2.03
AC055878.1-201ENST00000531858 CDK6Q00534 326 aa2.34□□□□□ -2.03
AC055878.1-201ENST00000531858 SS18Q15532 418 aa2.34□□□□□ -2.03
AC055878.1-201ENST00000531858 LINC01545Q5VT33 79 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms