RNA–Protein interactions for RNA: ENST00000531326.1

PTPN11-204, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 4

Gene PTPN11, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-204ENST00000531326 FFAR4Q5NUL3 377 aa13.12□□□□□ -0.31
PTPN11-204ENST00000531326 KIR2DL5AQ8N109 375 aa13.12□□□□□ -0.31
PTPN11-204ENST00000531326 KIR2DL5BQ8NHK3 375 aa13.12□□□□□ -0.31
PTPN11-204ENST00000531326 MAP6D1Q9H9H5 199 aa13.12□□□□□ -0.31
PTPN11-204ENST00000531326 BORCS7-ASMTA0A0B4J1R7 106 aa13.11□□□□□ -0.31
PTPN11-204ENST00000531326 A0A0D9SG52 128 aa13.11□□□□□ -0.31
PTPN11-204ENST00000531326 RPL35AP18077 110 aaKnown RBP13.11□□□□□ -0.31
PTPN11-204ENST00000531326 RPL7P18124 248 aaKnown RBP13.11□□□□□ -0.31
PTPN11-204ENST00000531326 ATF4P18848 351 aaPredicted RBP13.11□□□□□ -0.31
PTPN11-204ENST00000531326 SPATA31B1PQ5VZV4 182 aa13.11□□□□□ -0.31
PTPN11-204ENST00000531326 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.11□□□□□ -0.31
PTPN11-204ENST00000531326 PSMG3Q9BT73 122 aaPredicted RBP13.11□□□□□ -0.31
PTPN11-204ENST00000531326 SEPSECSQ9HD40 501 aaKnown RBP13.11□□□□□ -0.31
PTPN11-204ENST00000531326 RNF24Q9Y225 148 aa13.11□□□□□ -0.31
PTPN11-204ENST00000531326 FAM78BQ5VT40 261 aa13.1□□□□□ -0.31
PTPN11-204ENST00000531326 OR2G3Q8NGZ4 309 aa13.1□□□□□ -0.31
PTPN11-204ENST00000531326 ARPC5LQ9BPX5 153 aa13.1□□□□□ -0.31
PTPN11-204ENST00000531326 SH3BGRL3Q9H299 93 aa13.1□□□□□ -0.31
PTPN11-204ENST00000531326 A0A087X0K7 114 aa13.09□□□□□ -0.31
PTPN11-204ENST00000531326 ZNF688P0C7X2 276 aa13.09□□□□□ -0.31
PTPN11-204ENST00000531326 CMC4P56277 68 aaPredicted RBP13.09□□□□□ -0.31
PTPN11-204ENST00000531326 MIR17HGQ75NE6 70 aa13.09□□□□□ -0.31
PTPN11-204ENST00000531326 RPP25LQ8N5L8 163 aaKnown RBP13.09□□□□□ -0.31
PTPN11-204ENST00000531326 DNAH10Q8IVF4 4471 aa13.08□□□□□ -0.32
PTPN11-204ENST00000531326 BCL2L11O43521 198 aa13.08□□□□□ -0.32
PTPN11-204ENST00000531326 DEFB131AP59861 70 aa13.08□□□□□ -0.32
PTPN11-204ENST00000531326 RAB2AP61019 212 aa13.08□□□□□ -0.32
PTPN11-204ENST00000531326 ZNF124Q15973 351 aa13.08□□□□□ -0.32
PTPN11-204ENST00000531326 LGALSLQ3ZCW2 172 aaPredicted RBP13.08□□□□□ -0.32
PTPN11-204ENST00000531326 TMUB2Q71RG4 321 aa13.08□□□□□ -0.32
PTPN11-204ENST00000531326 BPIFA4PQ86YQ2 179 aa13.08□□□□□ -0.32
PTPN11-204ENST00000531326 APRG1Q8IVJ8 170 aa13.08□□□□□ -0.32
PTPN11-204ENST00000531326 FAM167A-AS1Q96KT0 104 aa13.08□□□□□ -0.32
PTPN11-204ENST00000531326 HYLS1Q96M11 299 aa13.08□□□□□ -0.32
PTPN11-204ENST00000531326 SLC25A2Q9BXI2 301 aa13.08□□□□□ -0.32
PTPN11-204ENST00000531326 MRPL32Q9BYC8 188 aaKnown RBP13.08□□□□□ -0.32
PTPN11-204ENST00000531326 KRTAP17-1Q9BYP8 105 aa13.08□□□□□ -0.32
PTPN11-204ENST00000531326 FUT9Q9Y231 359 aa13.08□□□□□ -0.32
PTPN11-204ENST00000531326 KLK5Q9Y337 293 aaPredicted RBP13.08□□□□□ -0.32
PTPN11-204ENST00000531326 IGLC2P0DOY2 106 aa13.07□□□□□ -0.32
PTPN11-204ENST00000531326 M6PRP20645 277 aa13.07□□□□□ -0.32
PTPN11-204ENST00000531326 MEOX2P50222 304 aa13.07□□□□□ -0.32
PTPN11-204ENST00000531326 SERF2P84101 59 aa13.07□□□□□ -0.32
PTPN11-204ENST00000531326 ACOT6Q3I5F7 207 aaPredicted RBP13.07□□□□□ -0.32
PTPN11-204ENST00000531326 GNPNAT1Q96EK6 184 aaPredicted RBP13.07□□□□□ -0.32
PTPN11-204ENST00000531326 TMEM14CQ9P0S9 112 aa13.07□□□□□ -0.32
PTPN11-204ENST00000531326 TRAV8-2A0A0B4J237 113 aa13.06□□□□□ -0.32
PTPN11-204ENST00000531326 KANTRA0A1W2PQU2 76 aa13.06□□□□□ -0.32
PTPN11-204ENST00000531326 PSMB3P49720 205 aa13.06□□□□□ -0.32
PTPN11-204ENST00000531326 PSMG4Q5JS54 123 aa13.06□□□□□ -0.32
PTPN11-204ENST00000531326 PHLDA1Q8WV24 401 aaPredicted RBP13.06□□□□□ -0.32
PTPN11-204ENST00000531326 H3BQ15 152 aa13.05□□□□□ -0.32
PTPN11-204ENST00000531326 ISLRO14498 428 aa13.05□□□□□ -0.32
PTPN11-204ENST00000531326 SNRPCP09234 159 aaKnown RBP13.05□□□□□ -0.32
PTPN11-204ENST00000531326 SNRPD3P62318 126 aaKnown RBP13.05□□□□□ -0.32
PTPN11-204ENST00000531326 RHOBP62745 196 aa13.05□□□□□ -0.32
PTPN11-204ENST00000531326 ZFP69Q49AA0 526 aa13.05□□□□□ -0.32
PTPN11-204ENST00000531326 SAMD13Q5VXD3 122 aa13.05□□□□□ -0.32
PTPN11-204ENST00000531326 C16orf92Q96LL3 132 aa13.05□□□□□ -0.32
PTPN11-204ENST00000531326 C20orf173Q96LM9 149 aa13.05□□□□□ -0.32
PTPN11-204ENST00000531326 HRH4Q9H3N8 390 aa13.05□□□□□ -0.32
PTPN11-204ENST00000531326 H3BTX0 84 aa13.04□□□□□ -0.32
PTPN11-204ENST00000531326 PFDN1O60925 122 aa13.04□□□□□ -0.32
PTPN11-204ENST00000531326 EIF3GO75821 320 aaKnown RBP eCLIP13.04□□□□□ -0.32
PTPN11-204ENST00000531326 PYYP10082 97 aa13.04□□□□□ -0.32
PTPN11-204ENST00000531326 SPP1P10451 314 aa13.04□□□□□ -0.32
PTPN11-204ENST00000531326 ID1P41134 155 aa13.04□□□□□ -0.32
PTPN11-204ENST00000531326 IGFL4Q6B9Z1 124 aa13.04□□□□□ -0.32
PTPN11-204ENST00000531326 FAM122CQ6P4D5 195 aa13.04□□□□□ -0.32
PTPN11-204ENST00000531326 C9orf62Q8N4C0 152 aa13.04□□□□□ -0.32
PTPN11-204ENST00000531326 OR10G4Q8NGN3 311 aa13.04□□□□□ -0.32
PTPN11-204ENST00000531326 OR10G9Q8NGN4 311 aa13.04□□□□□ -0.32
PTPN11-204ENST00000531326 OR10G7Q8NGN6 311 aa13.04□□□□□ -0.32
PTPN11-204ENST00000531326 ZNF503Q96F45 646 aa13.04□□□□□ -0.32
PTPN11-204ENST00000531326 ZNF471Q9BX82 626 aaPredicted RBP13.04□□□□□ -0.32
PTPN11-204ENST00000531326 CSTL1Q9H114 145 aa13.04□□□□□ -0.32
PTPN11-204ENST00000531326 ZNF586Q9NXT0 402 aa13.04□□□□□ -0.32
PTPN11-204ENST00000531326 HERC2O95714 4834 aa13.03□□□□□ -0.32
PTPN11-204ENST00000531326 SLC17A3O00476 420 aa13.03□□□□□ -0.32
PTPN11-204ENST00000531326 LCN15Q6UWW0 184 aa13.03□□□□□ -0.32
PTPN11-204ENST00000531326 SAT2Q96F10 170 aaPredicted RBP13.03□□□□□ -0.32
PTPN11-204ENST00000531326 LINC00052Q96N35 136 aa13.03□□□□□ -0.32
PTPN11-204ENST00000531326 RPRMQ9NS64 109 aa13.03□□□□□ -0.32
PTPN11-204ENST00000531326 VPS13DQ5THJ4 4388 aa13.03□□□□□ -0.32
PTPN11-204ENST00000531326 KNCNA6PVL3 124 aa13.02□□□□□ -0.33
PTPN11-204ENST00000531326 MBP02144 154 aa13.02□□□□□ -0.33
PTPN11-204ENST00000531326 HIST1H1EP10412 219 aaKnown RBP13.02□□□□□ -0.33
PTPN11-204ENST00000531326 DEFB1P60022 68 aa13.02□□□□□ -0.33
PTPN11-204ENST00000531326 TMEM41BQ5BJD5 291 aa13.02□□□□□ -0.33
PTPN11-204ENST00000531326 LGALS9CQ6DKI2 356 aa13.02□□□□□ -0.33
PTPN11-204ENST00000531326 FXYD5Q96DB9 178 aa13.02□□□□□ -0.33
PTPN11-204ENST00000531326 RARRES2Q99969 163 aa13.02□□□□□ -0.33
PTPN11-204ENST00000531326 OR51M1Q9H341 326 aa13.02□□□□□ -0.33
PTPN11-204ENST00000531326 ZNF331Q9NQX6 463 aaPredicted RBP13.02□□□□□ -0.33
PTPN11-204ENST00000531326 PLA2G2EQ9NZK7 142 aa13.02□□□□□ -0.33
PTPN11-204ENST00000531326 A0A1W2PPV4 95 aa13.01□□□□□ -0.33
PTPN11-204ENST00000531326 HLA-DMBP28068 263 aa13.01□□□□□ -0.33
PTPN11-204ENST00000531326 CDC34P49427 236 aaPredicted RBP13.01□□□□□ -0.33
PTPN11-204ENST00000531326 NANOS2P60321 138 aaKnown RBP13.01□□□□□ -0.33
PTPN11-204ENST00000531326 GUK1Q16774 197 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms