RNA–Protein interactions for RNA: ENST00000531041.1

SF3B2-211, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 1 (best)

Gene SF3B2, Length 1,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-211ENST00000531041 PAXXQ9BUH6 204 aa12.62□□□□□ -0.39
SF3B2-211ENST00000531041 CTXND1A0A1B0GTU2 59 aa12.61□□□□□ -0.39
SF3B2-211ENST00000531041 PRB2P02812 416 aaPredicted RBP12.61□□□□□ -0.39
SF3B2-211ENST00000531041 ID1P41134 155 aa12.61□□□□□ -0.39
SF3B2-211ENST00000531041 PSMB3P49720 205 aa12.61□□□□□ -0.39
SF3B2-211ENST00000531041 SNRPD3P62318 126 aaKnown RBP12.61□□□□□ -0.39
SF3B2-211ENST00000531041 ZNF726P1Q15940 193 aa12.61□□□□□ -0.39
SF3B2-211ENST00000531041 RNF141Q8WVD5 230 aa12.61□□□□□ -0.39
SF3B2-211ENST00000531041 FXYD5Q96DB9 178 aa12.61□□□□□ -0.39
SF3B2-211ENST00000531041 SAT2Q96F10 170 aaPredicted RBP12.61□□□□□ -0.39
SF3B2-211ENST00000531041 PHYHIPLQ96FC7 376 aa12.61□□□□□ -0.39
SF3B2-211ENST00000531041 MAP6D1Q9H9H5 199 aa12.61□□□□□ -0.39
SF3B2-211ENST00000531041 ZNF586Q9NXT0 402 aa12.61□□□□□ -0.39
SF3B2-211ENST00000531041 AGRNO00468 2067 aa12.6□□□□□ -0.39
SF3B2-211ENST00000531041 OR11H12B2RN74 326 aa12.6□□□□□ -0.39
SF3B2-211ENST00000531041 HMGB3O15347 200 aaKnown RBP12.6□□□□□ -0.39
SF3B2-211ENST00000531041 ZNF253O75346 499 aa12.6□□□□□ -0.39
SF3B2-211ENST00000531041 EIF3GO75821 320 aaKnown RBP eCLIP12.6□□□□□ -0.39
SF3B2-211ENST00000531041 SNRPCP09234 159 aaKnown RBP12.6□□□□□ -0.39
SF3B2-211ENST00000531041 NBEAP1P0C6P0 100 aa12.6□□□□□ -0.39
SF3B2-211ENST00000531041 ZNF688P0C7X2 276 aa12.6□□□□□ -0.39
SF3B2-211ENST00000531041 DPPA3Q6W0C5 159 aa12.6□□□□□ -0.39
SF3B2-211ENST00000531041 SSX7Q7RTT5 188 aa12.6□□□□□ -0.39
SF3B2-211ENST00000531041 C16orf92Q96LL3 132 aa12.6□□□□□ -0.39
SF3B2-211ENST00000531041 SLC50A1Q9BRV3 221 aa12.6□□□□□ -0.39
SF3B2-211ENST00000531041 ZNF331Q9NQX6 463 aaPredicted RBP12.6□□□□□ -0.39
SF3B2-211ENST00000531041 TRBV19A0A075B6N1 114 aa12.59□□□□□ -0.39
SF3B2-211ENST00000531041 OR10J4P0C629 311 aa12.59□□□□□ -0.39
SF3B2-211ENST00000531041 ARL14EPLP0DKL9 152 aa12.59□□□□□ -0.39
SF3B2-211ENST00000531041 FHITP49789 147 aa12.59□□□□□ -0.39
SF3B2-211ENST00000531041 SULT1A2P50226 295 aa12.59□□□□□ -0.39
SF3B2-211ENST00000531041 RAB5CP51148 216 aa12.59□□□□□ -0.39
SF3B2-211ENST00000531041 DEFB131AP59861 70 aa12.59□□□□□ -0.39
SF3B2-211ENST00000531041 PDE6HQ13956 83 aa12.59□□□□□ -0.39
SF3B2-211ENST00000531041 LRRC20Q8TCA0 184 aa12.59□□□□□ -0.39
SF3B2-211ENST00000531041 UBQLN2Q9UHD9 624 aa12.59□□□□□ -0.39
SF3B2-211ENST00000531041 TRAV8-2A0A0B4J237 113 aa12.58□□□□□ -0.4
SF3B2-211ENST00000531041 K7EIL1 84 aa12.58□□□□□ -0.4
SF3B2-211ENST00000531041 CXorf1O96002 111 aa12.58□□□□□ -0.4
SF3B2-211ENST00000531041 UBE2L3P68036 154 aaKnown RBP12.58□□□□□ -0.4
SF3B2-211ENST00000531041 H3BTX0 84 aa12.57□□□□□ -0.4
SF3B2-211ENST00000531041 SLC17A3O00476 420 aa12.57□□□□□ -0.4
SF3B2-211ENST00000531041 NDUFB4O95168 129 aa12.57□□□□□ -0.4
SF3B2-211ENST00000531041 PSMG4Q5JS54 123 aa12.57□□□□□ -0.4
SF3B2-211ENST00000531041 FAM213BQ8TBF2 198 aa12.57□□□□□ -0.4
SF3B2-211ENST00000531041 BLNKQ8WV28 456 aa12.57□□□□□ -0.4
SF3B2-211ENST00000531041 WFDC10AQ9H1F0 79 aa12.57□□□□□ -0.4
SF3B2-211ENST00000531041 CLEC5AQ9NY25 188 aa12.57□□□□□ -0.4
SF3B2-211ENST00000531041 GCHFRP30047 84 aa12.56□□□□□ -0.4
SF3B2-211ENST00000531041 DEFA6Q01524 100 aa12.56□□□□□ -0.4
SF3B2-211ENST00000531041 IGFL4Q6B9Z1 124 aa12.56□□□□□ -0.4
SF3B2-211ENST00000531041 APRG1Q8IVJ8 170 aa12.56□□□□□ -0.4
SF3B2-211ENST00000531041 DEFB125Q8N687 156 aa12.56□□□□□ -0.4
SF3B2-211ENST00000531041 SUN5Q8TC36 379 aa12.56□□□□□ -0.4
SF3B2-211ENST00000531041 MBD3L1Q8WWY6 194 aa12.56□□□□□ -0.4
SF3B2-211ENST00000531041 LINC00052Q96N35 136 aa12.56□□□□□ -0.4
SF3B2-211ENST00000531041 MAP1LC3B2A6NCE7 125 aa12.55□□□□□ -0.4
SF3B2-211ENST00000531041 A8MZ25 164 aa12.55□□□□□ -0.4
SF3B2-211ENST00000531041 PSG9Q00887 426 aa12.55□□□□□ -0.4
SF3B2-211ENST00000531041 ALKAL2Q6UX46 152 aa12.55□□□□□ -0.4
SF3B2-211ENST00000531041 RNF182Q8N6D2 247 aa12.55□□□□□ -0.4
SF3B2-211ENST00000531041 C20orf173Q96LM9 149 aa12.55□□□□□ -0.4
SF3B2-211ENST00000531041 MAP1LC3BQ9GZQ8 125 aa12.55□□□□□ -0.4
SF3B2-211ENST00000531041 MEGF8Q7Z7M0 2845 aa12.55□□□□□ -0.4
SF3B2-211ENST00000531041 IGHV4-30-4P0DP06 118 aa12.54□□□□□ -0.4
SF3B2-211ENST00000531041 ZNF124Q15973 351 aa12.54□□□□□ -0.4
SF3B2-211ENST00000531041 PSG3Q16557 428 aa12.54□□□□□ -0.4
SF3B2-211ENST00000531041 LYPD1Q8N2G4 141 aa12.54□□□□□ -0.4
SF3B2-211ENST00000531041 CITED4Q96RK1 184 aa12.54□□□□□ -0.4
SF3B2-211ENST00000531041 TMEM167BQ9NRX6 74 aa12.54□□□□□ -0.4
SF3B2-211ENST00000531041 H2AFB1P0C5Y9 115 aa12.54□□□□□ -0.4
SF3B2-211ENST00000531041 HLA-DMBP28068 263 aa12.54□□□□□ -0.4
SF3B2-211ENST00000531041 FGF8P55075 233 aaPredicted RBP12.54□□□□□ -0.4
SF3B2-211ENST00000531041 FAM74A1Q5RGS3 127 aa12.54□□□□□ -0.4
SF3B2-211ENST00000531041 SFT2D1Q8WV19 159 aa12.54□□□□□ -0.4
SF3B2-211ENST00000531041 AAMDCQ9H7C9 122 aa12.54□□□□□ -0.4
SF3B2-211ENST00000531041 SRD5A3Q9H8P0 318 aa12.54□□□□□ -0.4
SF3B2-211ENST00000531041 RANP62826 216 aaKnown RBP12.53□□□□□ -0.4
SF3B2-211ENST00000531041 MRPL53Q96EL3 112 aaKnown RBP12.53□□□□□ -0.4
SF3B2-211ENST00000531041 TUBA4BQ9H853 241 aa12.53□□□□□ -0.4
SF3B2-211ENST00000531041 PRELID1Q9Y255 219 aa12.53□□□□□ -0.4
SF3B2-211ENST00000531041 TEX261Q6UWH6 196 aa12.52□□□□□ -0.41
SF3B2-211ENST00000531041 FOXI2Q6ZQN5 318 aa12.52□□□□□ -0.41
SF3B2-211ENST00000531041 IQCF2Q8IXL9 164 aa12.52□□□□□ -0.41
SF3B2-211ENST00000531041 EXOC3-AS1Q8N2X6 119 aa12.52□□□□□ -0.41
SF3B2-211ENST00000531041 ZNF738Q8NE65 137 aa12.52□□□□□ -0.41
SF3B2-211ENST00000531041 MRAPQ8TCY5 172 aa12.52□□□□□ -0.41
SF3B2-211ENST00000531041 Q9H3A6 140 aa12.52□□□□□ -0.41
SF3B2-211ENST00000531041 TMPRSS5Q9H3S3 457 aa12.52□□□□□ -0.41
SF3B2-211ENST00000531041 SAV1Q9H4B6 383 aaPredicted RBP12.52□□□□□ -0.41
SF3B2-211ENST00000531041 FBN3Q75N90 2809 aa12.51□□□□□ -0.41
SF3B2-211ENST00000531041 TRAV1-1A0A0B4J248 108 aa12.51□□□□□ -0.41
SF3B2-211ENST00000531041 KNCNA6PVL3 124 aa12.51□□□□□ -0.41
SF3B2-211ENST00000531041 ICAM4Q14773 271 aa12.51□□□□□ -0.41
SF3B2-211ENST00000531041 DEFB121Q5J5C9 76 aa12.51□□□□□ -0.41
SF3B2-211ENST00000531041 A0A0J9YX75 114 aa12.5□□□□□ -0.41
SF3B2-211ENST00000531041 RBMY1BA6NDE4 496 aaKnown RBP12.5□□□□□ -0.41
SF3B2-211ENST00000531041 RBMY1EA6NEQ0 496 aaKnown RBP12.5□□□□□ -0.41
SF3B2-211ENST00000531041 ZNF705EA8MWA4 302 aaPredicted RBP12.5□□□□□ -0.41
SF3B2-211ENST00000531041 TEX46H3BTG2 121 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms