RNA–Protein interactions for RNA: ENST00000529866.5

COPB1-207, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 729 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-207ENST00000529866 BAP18Q8IXM2 172 aa7.21□□□□□ -1.26
COPB1-207ENST00000529866 OR11H7Q8NGC8 314 aa7.21□□□□□ -1.26
COPB1-207ENST00000529866 UHRF2Q96PU4 802 aa7.21□□□□□ -1.26
COPB1-207ENST00000529866 LINC01587Q99440 93 aa7.21□□□□□ -1.26
COPB1-207ENST00000529866 SDHCQ99643 169 aaPredicted RBP7.21□□□□□ -1.26
COPB1-207ENST00000529866 CCDC160A6NGH7 325 aa7.2□□□□□ -1.26
COPB1-207ENST00000529866 PMS2P5A8MQ11 134 aa7.2□□□□□ -1.26
COPB1-207ENST00000529866 SNRPGP15A8MWD9 76 aa7.2□□□□□ -1.26
COPB1-207ENST00000529866 CRXO43186 299 aaPredicted RBP7.2□□□□□ -1.26
COPB1-207ENST00000529866 ATP5IP56385 69 aaPredicted RBP7.2□□□□□ -1.26
COPB1-207ENST00000529866 AP3S2P59780 193 aa7.2□□□□□ -1.26
COPB1-207ENST00000529866 POLR2GP62487 172 aaKnown RBP eCLIP7.2□□□□□ -1.26
COPB1-207ENST00000529866 SPANXN5Q5MJ07 72 aa7.2□□□□□ -1.26
COPB1-207ENST00000529866 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.2□□□□□ -1.26
COPB1-207ENST00000529866 TMEM144Q7Z5S9 345 aa7.2□□□□□ -1.26
COPB1-207ENST00000529866 SLC25A21Q9BQT8 299 aaPredicted RBP7.2□□□□□ -1.26
COPB1-207ENST00000529866 SLC25A22Q9H936 323 aa7.2□□□□□ -1.26
COPB1-207ENST00000529866 HMCN2Q8NDA2 5059 aa7.2□□□□□ -1.26
COPB1-207ENST00000529866 TRAV8-2A0A0B4J237 113 aa7.19□□□□□ -1.26
COPB1-207ENST00000529866 A0A0J9YY99 117 aa7.19□□□□□ -1.26
COPB1-207ENST00000529866 C9orf170A2RU37 121 aa7.19□□□□□ -1.26
COPB1-207ENST00000529866 ZNF98A6NK75 572 aa7.19□□□□□ -1.26
COPB1-207ENST00000529866 H3BRN7 92 aa7.19□□□□□ -1.26
COPB1-207ENST00000529866 BOLA2-SMG1P6H3BVE0 249 aa7.19□□□□□ -1.26
COPB1-207ENST00000529866 HTN1P15515 57 aa7.19□□□□□ -1.26
COPB1-207ENST00000529866 AZU1P20160 251 aa7.19□□□□□ -1.26
COPB1-207ENST00000529866 S100A7P31151 101 aa7.19□□□□□ -1.26
COPB1-207ENST00000529866 RAB11AP62491 216 aa7.19□□□□□ -1.26
COPB1-207ENST00000529866 ESRGQ1W209 222 aa7.19□□□□□ -1.26
COPB1-207ENST00000529866 ZNF493Q6ZR52 646 aa7.19□□□□□ -1.26
COPB1-207ENST00000529866 Q6ZRN7 208 aaPredicted RBP7.19□□□□□ -1.26
COPB1-207ENST00000529866 OR4D5Q8NGN0 318 aa7.19□□□□□ -1.26
COPB1-207ENST00000529866 NOP10Q9NPE3 64 aaKnown RBP7.19□□□□□ -1.26
COPB1-207ENST00000529866 PPP1R14DQ9NXH3 145 aa7.19□□□□□ -1.26
COPB1-207ENST00000529866 MDFICQ9P1T7 246 aa7.19□□□□□ -1.26
COPB1-207ENST00000529866 TRAV12-2A0A075B6T6 113 aa7.18□□□□□ -1.26
COPB1-207ENST00000529866 LINC00854A0A1B0GVQ3 168 aa7.18□□□□□ -1.26
COPB1-207ENST00000529866 H3BNG1 76 aa7.18□□□□□ -1.26
COPB1-207ENST00000529866 MED6O75586 246 aa7.18□□□□□ -1.26
COPB1-207ENST00000529866 NDUFB6O95139 128 aa7.18□□□□□ -1.26
COPB1-207ENST00000529866 SMR3BP02814 79 aaPredicted RBP7.18□□□□□ -1.26
COPB1-207ENST00000529866 ORM2P19652 201 aa7.18□□□□□ -1.26
COPB1-207ENST00000529866 UBE2MP61081 183 aaKnown RBP7.18□□□□□ -1.26
COPB1-207ENST00000529866 ID3Q02535 119 aa7.18□□□□□ -1.26
COPB1-207ENST00000529866 AKR1C1Q04828 323 aa7.18□□□□□ -1.26
COPB1-207ENST00000529866 NFE4Q86UQ8 179 aa7.18□□□□□ -1.26
COPB1-207ENST00000529866 RNF182Q8N6D2 247 aa7.18□□□□□ -1.26
COPB1-207ENST00000529866 TMEM263Q8WUH6 116 aaKnown RBP7.18□□□□□ -1.26
COPB1-207ENST00000529866 RSG1Q9BU20 258 aa7.18□□□□□ -1.26
COPB1-207ENST00000529866 ZNF701M0R085 212 aaPredicted RBP7.17□□□□□ -1.26
COPB1-207ENST00000529866 SSSCA1O60232 199 aa7.17□□□□□ -1.26
COPB1-207ENST00000529866 CFDP00746 253 aaPredicted RBP7.17□□□□□ -1.26
COPB1-207ENST00000529866 ANXA7P20073 488 aaKnown RBP7.17□□□□□ -1.26
COPB1-207ENST00000529866 S100A5P33763 92 aa7.17□□□□□ -1.26
COPB1-207ENST00000529866 FUSP35637 526 aaKnown RBP eCLIP7.17□□□□□ -1.261e-5■■■□□ 16.6
COPB1-207ENST00000529866 KRTAP10-1P60331 282 aa7.17□□□□□ -1.26
COPB1-207ENST00000529866 RRAS2P62070 204 aaPredicted RBP7.17□□□□□ -1.26
COPB1-207ENST00000529866 RHOBP62745 196 aa7.17□□□□□ -1.26
COPB1-207ENST00000529866 CYP2G1PQ6ZSU1 146 aa7.17□□□□□ -1.26
COPB1-207ENST00000529866 ZNF738Q8NE65 137 aa7.17□□□□□ -1.26
COPB1-207ENST00000529866 OR1B1Q8NGR6 318 aa7.17□□□□□ -1.26
COPB1-207ENST00000529866 RNASE8Q8TDE3 154 aaKnown RBP7.17□□□□□ -1.26
COPB1-207ENST00000529866 DEDD2Q8WXF8 326 aa7.17□□□□□ -1.26
COPB1-207ENST00000529866 GPR82Q96P67 336 aa7.17□□□□□ -1.26
COPB1-207ENST00000529866 CIB3Q96Q77 187 aaPredicted RBP7.17□□□□□ -1.26
COPB1-207ENST00000529866 SLC25A39Q9BZJ4 359 aaPredicted RBP7.17□□□□□ -1.26
COPB1-207ENST00000529866 SLC45A2Q9UMX9 530 aa7.17□□□□□ -1.26
COPB1-207ENST00000529866 STRAPQ9Y3F4 350 aaKnown RBP7.17□□□□□ -1.26
COPB1-207ENST00000529866 PIGBOS1A0A0B4J2F0 54 aa7.16□□□□□ -1.26
COPB1-207ENST00000529866 SMCO3A2RU48 225 aa7.16□□□□□ -1.26
COPB1-207ENST00000529866 H7BYZ3 331 aa7.16□□□□□ -1.26
COPB1-207ENST00000529866 SIVA1O15304 175 aa7.16□□□□□ -1.26
COPB1-207ENST00000529866 RLN2P04090 185 aa7.16□□□□□ -1.26
COPB1-207ENST00000529866 OR4E1P0C645 316 aa7.16□□□□□ -1.26
COPB1-207ENST00000529866 ARL16Q0P5N6 197 aa7.16□□□□□ -1.26
COPB1-207ENST00000529866 PATE2Q6UY27 113 aa7.16□□□□□ -1.26
COPB1-207ENST00000529866 SYT8Q8NBV8 401 aa7.16□□□□□ -1.26
COPB1-207ENST00000529866 BPIFCQ8NFQ6 507 aa7.16□□□□□ -1.26
COPB1-207ENST00000529866 PSENENQ9NZ42 101 aa7.16□□□□□ -1.26
COPB1-207ENST00000529866 RCL1Q9Y2P8 373 aaKnown RBP7.16□□□□□ -1.26
COPB1-207ENST00000529866 A0A087WTM6 91 aa7.15□□□□□ -1.26
COPB1-207ENST00000529866 CCSO14618 274 aa7.15□□□□□ -1.26
COPB1-207ENST00000529866 SCGB1D2O95969 90 aa7.15□□□□□ -1.26
COPB1-207ENST00000529866 METTL15P1P0C7V9 234 aa7.15□□□□□ -1.26
COPB1-207ENST00000529866 LINC00869P0C866 280 aa7.15□□□□□ -1.26
COPB1-207ENST00000529866 GCSHP23434 173 aa7.15□□□□□ -1.26
COPB1-207ENST00000529866 RPP30P78346 268 aaKnown RBP7.15□□□□□ -1.26
COPB1-207ENST00000529866 HIST1H1AQ02539 215 aaPredicted RBP7.15□□□□□ -1.26
COPB1-207ENST00000529866 FGL1Q08830 312 aa7.15□□□□□ -1.26
COPB1-207ENST00000529866 SLC38A11Q08AI6 406 aa7.15□□□□□ -1.26
COPB1-207ENST00000529866 SPANXN2Q5MJ10 180 aa7.15□□□□□ -1.26
COPB1-207ENST00000529866 SERTAD4-AS1Q5TG53 156 aa7.15□□□□□ -1.26
COPB1-207ENST00000529866 TMEM14EPQ6UXP3 125 aa7.15□□□□□ -1.26
COPB1-207ENST00000529866 CCDC28AQ8IWP9 274 aa7.15□□□□□ -1.26
COPB1-207ENST00000529866 LINC00612Q8N6U2 182 aa7.15□□□□□ -1.26
COPB1-207ENST00000529866 SHANK2-AS3Q9BTD1 123 aa7.15□□□□□ -1.26
COPB1-207ENST00000529866 TMEM147Q9BVK8 224 aa7.15□□□□□ -1.26
COPB1-207ENST00000529866 GAGE12BA1L429 117 aa7.14□□□□□ -1.27
COPB1-207ENST00000529866 MRPS12O15235 138 aaKnown RBP7.14□□□□□ -1.27
COPB1-207ENST00000529866 GAGE7O76087 117 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms