RNA–Protein interactions for RNA: ENST00000529851.5

APLF-206, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 5

Gene APLF, Length 2,863 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-206ENST00000529851 CHD6Q8TD26 2715 aa12.45□□□□□ -0.42
APLF-206ENST00000529851 OR5AL1P0C617 328 aa12.44□□□□□ -0.42
APLF-206ENST00000529851 EIF4EBP1Q13541 118 aaPredicted RBP12.44□□□□□ -0.42
APLF-206ENST00000529851 RNF183Q96D59 192 aa12.44□□□□□ -0.42
APLF-206ENST00000529851 CALYQ9NYX4 217 aa12.44□□□□□ -0.42
APLF-206ENST00000529851 LOXL3P58215 753 aa12.44□□□□□ -0.42
APLF-206ENST00000529851 ZCCHC24Q8N2G6 241 aaKnown RBP12.44□□□□□ -0.42
APLF-206ENST00000529851 DEFB108BQ8NET1 73 aa12.44□□□□□ -0.42
APLF-206ENST00000529851 GRAMD2BQ96HH9 432 aa12.44□□□□□ -0.42
APLF-206ENST00000529851 ADTRPQ96IZ2 230 aa12.44□□□□□ -0.42
APLF-206ENST00000529851 MRPL16Q9NX20 251 aaKnown RBP12.44□□□□□ -0.42
APLF-206ENST00000529851 INSIG2Q9Y5U4 225 aa12.44□□□□□ -0.42
APLF-206ENST00000529851 SLC25A16P16260 332 aa12.44□□□□□ -0.42
APLF-206ENST00000529851 GCSHP23434 173 aa12.44□□□□□ -0.42
APLF-206ENST00000529851 TEPPQ6URK8 271 aa12.44□□□□□ -0.42
APLF-206ENST00000529851 FOXI2Q6ZQN5 318 aa12.44□□□□□ -0.42
APLF-206ENST00000529851 CCL13Q99616 98 aa12.44□□□□□ -0.42
APLF-206ENST00000529851 TET2Q6N021 2002 aaPredicted RBP12.43□□□□□ -0.42
APLF-206ENST00000529851 ABCA1O95477 2261 aa12.43□□□□□ -0.42
APLF-206ENST00000529851 SLC25A17O43808 307 aa12.43□□□□□ -0.42
APLF-206ENST00000529851 TSPAN13O95857 204 aa12.43□□□□□ -0.42
APLF-206ENST00000529851 CATR1Q13166 79 aa12.43□□□□□ -0.42
APLF-206ENST00000529851 FAM162BQ5T6X4 162 aa12.43□□□□□ -0.42
APLF-206ENST00000529851 PCP2Q8IVA1 136 aa12.43□□□□□ -0.42
APLF-206ENST00000529851 RPUSD1Q9UJJ7 312 aaKnown RBP12.43□□□□□ -0.42
APLF-206ENST00000529851 PSG8Q9UQ74 426 aa12.43□□□□□ -0.42
APLF-206ENST00000529851 PROP1O75360 226 aa12.43□□□□□ -0.42
APLF-206ENST00000529851 KIR2DS2P43631 304 aa12.43□□□□□ -0.42
APLF-206ENST00000529851 NMUP48645 174 aa12.43□□□□□ -0.42
APLF-206ENST00000529851 HBBP68871 147 aa12.43□□□□□ -0.42
APLF-206ENST00000529851 OR8A1Q8NGG7 326 aa12.43□□□□□ -0.42
APLF-206ENST00000529851 OR4A16Q8NH70 328 aa12.43□□□□□ -0.42
APLF-206ENST00000529851 C20orf78Q9BR46 151 aa12.43□□□□□ -0.42
APLF-206ENST00000529851 TMEM167BQ9NRX6 74 aa12.43□□□□□ -0.42
APLF-206ENST00000529851 ANKHD1Q8IWZ3 2542 aaKnown RBP12.43□□□□□ -0.42
APLF-206ENST00000529851 SMIM13P0DJ93 91 aa12.42□□□□□ -0.42
APLF-206ENST00000529851 HERV-K104P63124 156 aa12.42□□□□□ -0.42
APLF-206ENST00000529851 ZNRD1Q9P1U0 126 aa12.42□□□□□ -0.42
APLF-206ENST00000529851 CTSZQ9UBR2 303 aa12.42□□□□□ -0.42
APLF-206ENST00000529851 DSCAMO60469 2012 aa12.42□□□□□ -0.42
APLF-206ENST00000529851 A0A1B0GXF2 115 aa12.42□□□□□ -0.42
APLF-206ENST00000529851 PRSS46E5RG02 174 aa12.42□□□□□ -0.42
APLF-206ENST00000529851 H3BMG7 143 aa12.42□□□□□ -0.42
APLF-206ENST00000529851 RPL39P5Q59GN2 51 aa12.42□□□□□ -0.42
APLF-206ENST00000529851 BOD1L2Q8IYS8 172 aa12.42□□□□□ -0.42
APLF-206ENST00000529851 PGLYRP4Q96LB8 373 aa12.42□□□□□ -0.42
APLF-206ENST00000529851 ZNF714Q96N38 554 aa12.42□□□□□ -0.42
APLF-206ENST00000529851 PIMREGQ9BSJ6 248 aa12.42□□□□□ -0.42
APLF-206ENST00000529851 DOPEY1Q5JWR5 2465 aa12.42□□□□□ -0.42
APLF-206ENST00000529851 MED13LQ71F56 2210 aa12.42□□□□□ -0.42
APLF-206ENST00000529851 SMAD7O15105 426 aaKnown RBP12.41□□□□□ -0.42
APLF-206ENST00000529851 FXYD2P54710 66 aa12.41□□□□□ -0.42
APLF-206ENST00000529851 AMTNQ6UX39 209 aa12.41□□□□□ -0.42
APLF-206ENST00000529851 C1orf229Q6ZS94 237 aaPredicted RBP12.41□□□□□ -0.42
APLF-206ENST00000529851 C10orf105Q8TEF2 133 aa12.41□□□□□ -0.42
APLF-206ENST00000529851 CHEK1O14757 476 aa12.41□□□□□ -0.42
APLF-206ENST00000529851 NABP2Q9BQ15 211 aa12.41□□□□□ -0.42
APLF-206ENST00000529851 SRSF8Q9BRL6 282 aaKnown RBP12.41□□□□□ -0.42
APLF-206ENST00000529851 TRAV3A0A0B4J244 114 aa12.4□□□□□ -0.42
APLF-206ENST00000529851 FAM90A9PA6NNJ1 464 aa12.4□□□□□ -0.42
APLF-206ENST00000529851 A8MWL6 223 aa12.4□□□□□ -0.42
APLF-206ENST00000529851 TAS2R45P59539 299 aa12.4□□□□□ -0.42
APLF-206ENST00000529851 MOB3BQ86TA1 216 aa12.4□□□□□ -0.42
APLF-206ENST00000529851 IGHV4-39P01824 125 aa12.4□□□□□ -0.42
APLF-206ENST00000529851 SPINK8P0C7L1 97 aa12.4□□□□□ -0.42
APLF-206ENST00000529851 ZNF134P52741 427 aa12.4□□□□□ -0.42
APLF-206ENST00000529851 FAM216BQ8N7L0 139 aa12.4□□□□□ -0.42
APLF-206ENST00000529851 ZNF747Q9BV97 191 aa12.4□□□□□ -0.42
APLF-206ENST00000529851 TMEM200BQ69YZ2 307 aa12.4□□□□□ -0.43
APLF-206ENST00000529851 SLC25A48Q6ZT89 311 aaKnown RBP12.4□□□□□ -0.43
APLF-206ENST00000529851 PIP4P2Q8N4L2 257 aa12.4□□□□□ -0.43
APLF-206ENST00000529851 SPTAN1Q13813 2472 aaKnown RBP12.39□□□□□ -0.43
APLF-206ENST00000529851 PPIFP30405 207 aaKnown RBP12.39□□□□□ -0.43
APLF-206ENST00000529851 GNG12Q9UBI6 72 aa12.39□□□□□ -0.43
APLF-206ENST00000529851 AKAP6Q13023 2319 aa12.39□□□□□ -0.43
APLF-206ENST00000529851 TRAV5A0A0B4J249 113 aa12.39□□□□□ -0.43
APLF-206ENST00000529851 FCN3O75636 299 aa12.39□□□□□ -0.43
APLF-206ENST00000529851 CNIH1O95406 144 aa12.39□□□□□ -0.43
APLF-206ENST00000529851 AMMECR1Q9Y4X0 333 aaPredicted RBP12.39□□□□□ -0.43
APLF-206ENST00000529851 FCGR3BO75015 233 aa12.38□□□□□ -0.43
APLF-206ENST00000529851 MT-ATP8P03928 68 aa12.38□□□□□ -0.43
APLF-206ENST00000529851 MYOD1P15172 320 aa12.38□□□□□ -0.43
APLF-206ENST00000529851 VDAC2P45880 294 aaPredicted RBP12.38□□□□□ -0.43
APLF-206ENST00000529851 FXYD7P58549 80 aa12.38□□□□□ -0.43
APLF-206ENST00000529851 ZNF418Q8TF45 676 aaPredicted RBP12.38□□□□□ -0.43
APLF-206ENST00000529851 TEX50A0A1B0GTY4 177 aa12.38□□□□□ -0.43
APLF-206ENST00000529851 OOSP1A8MZH6 123 aa12.38□□□□□ -0.43
APLF-206ENST00000529851 APOHP02749 345 aaPredicted RBP12.38□□□□□ -0.43
APLF-206ENST00000529851 LYPD2Q6UXB3 125 aa12.38□□□□□ -0.43
APLF-206ENST00000529851 BCL6BQ8N143 479 aaPredicted RBP12.38□□□□□ -0.43
APLF-206ENST00000529851 TTTY13Q9BZ97 58 aa12.38□□□□□ -0.43
APLF-206ENST00000529851 CFAP46Q8IYW2 2715 aa12.38□□□□□ -0.43
APLF-206ENST00000529851 PLXNB1O43157 2135 aa12.38□□□□□ -0.43
APLF-206ENST00000529851 B5MCH6 92 aa12.37□□□□□ -0.43
APLF-206ENST00000529851 FNDC10F2Z333 226 aa12.37□□□□□ -0.43
APLF-206ENST00000529851 ENSAO43768 121 aaKnown RBP12.37□□□□□ -0.43
APLF-206ENST00000529851 PRR20EP86478 221 aa12.37□□□□□ -0.43
APLF-206ENST00000529851 PRR20CP86479 221 aa12.37□□□□□ -0.43
APLF-206ENST00000529851 PRR20DP86480 221 aa12.37□□□□□ -0.43
APLF-206ENST00000529851 PRR20BP86481 221 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms