RNA–Protein interactions for RNA: ENST00000529714.5

SMCO4-205, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

TSL 3

Gene SMCO4, Length 355 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-205ENST00000529714 ISLRO14498 428 aa10.22□□□□□ -0.77
SMCO4-205ENST00000529714 SOCS3O14543 225 aa10.22□□□□□ -0.77
SMCO4-205ENST00000529714 HMGB3O15347 200 aaKnown RBP10.22□□□□□ -0.77
SMCO4-205ENST00000529714 IFNA7P01567 189 aa10.22□□□□□ -0.77
SMCO4-205ENST00000529714 H2AFB1P0C5Y9 115 aa10.22□□□□□ -0.77
SMCO4-205ENST00000529714 NBEAP1P0C6P0 100 aa10.22□□□□□ -0.77
SMCO4-205ENST00000529714 PYYP10082 97 aa10.22□□□□□ -0.77
SMCO4-205ENST00000529714 UBE2L3P68036 154 aaKnown RBP10.22□□□□□ -0.77
SMCO4-205ENST00000529714 FAM74A1Q5RGS3 127 aa10.22□□□□□ -0.77
SMCO4-205ENST00000529714 KPRPQ5T749 579 aaPredicted RBP10.22□□□□□ -0.77
SMCO4-205ENST00000529714 GBGT1Q8N5D6 347 aa10.22□□□□□ -0.77
SMCO4-205ENST00000529714 ZNF680Q8NEM1 530 aa10.22□□□□□ -0.77
SMCO4-205ENST00000529714 SUN5Q8TC36 379 aa10.22□□□□□ -0.77
SMCO4-205ENST00000529714 LRRC20Q8TCA0 184 aa10.22□□□□□ -0.77
SMCO4-205ENST00000529714 SAT2Q96F10 170 aaPredicted RBP10.22□□□□□ -0.77
SMCO4-205ENST00000529714 FAM110AQ9BQ89 295 aa10.22□□□□□ -0.77
SMCO4-205ENST00000529714 SLC50A1Q9BRV3 221 aa10.22□□□□□ -0.77
SMCO4-205ENST00000529714 TMEM167BQ9NRX6 74 aa10.22□□□□□ -0.77
SMCO4-205ENST00000529714 ZNF586Q9NXT0 402 aa10.22□□□□□ -0.77
SMCO4-205ENST00000529714 TRBV19A0A075B6N1 114 aa10.21□□□□□ -0.77
SMCO4-205ENST00000529714 TEX46H3BTG2 121 aa10.21□□□□□ -0.77
SMCO4-205ENST00000529714 EIF3GO75821 320 aaKnown RBP eCLIP10.21□□□□□ -0.77
SMCO4-205ENST00000529714 OR10J4P0C629 311 aa10.21□□□□□ -0.77
SMCO4-205ENST00000529714 GCHFRP30047 84 aa10.21□□□□□ -0.77
SMCO4-205ENST00000529714 ID1P41134 155 aa10.21□□□□□ -0.77
SMCO4-205ENST00000529714 PSMB3P49720 205 aa10.21□□□□□ -0.77
SMCO4-205ENST00000529714 CMC4P56277 68 aaPredicted RBP10.21□□□□□ -0.77
SMCO4-205ENST00000529714 SFT2D1Q8WV19 159 aa10.21□□□□□ -0.77
SMCO4-205ENST00000529714 CLEC5AQ9NY25 188 aa10.21□□□□□ -0.77
SMCO4-205ENST00000529714 ZNF705EA8MWA4 302 aaPredicted RBP10.2□□□□□ -0.78
SMCO4-205ENST00000529714 HBE1P02100 147 aa10.2□□□□□ -0.78
SMCO4-205ENST00000529714 TFPI2P48307 235 aa10.2□□□□□ -0.78
SMCO4-205ENST00000529714 SNRPD3P62318 126 aaKnown RBP10.2□□□□□ -0.78
SMCO4-205ENST00000529714 BLOC1S1P78537 153 aa10.2□□□□□ -0.78
SMCO4-205ENST00000529714 LYPD1Q8N2G4 141 aa10.2□□□□□ -0.78
SMCO4-205ENST00000529714 SORL1Q92673 2214 aa10.2□□□□□ -0.78
SMCO4-205ENST00000529714 C16orf92Q96LL3 132 aa10.2□□□□□ -0.78
SMCO4-205ENST00000529714 ZNF331Q9NQX6 463 aaPredicted RBP10.2□□□□□ -0.78
SMCO4-205ENST00000529714 UBQLN2Q9UHD9 624 aa10.2□□□□□ -0.78
SMCO4-205ENST00000529714 NDUFB4O95168 129 aa10.19□□□□□ -0.78
SMCO4-205ENST00000529714 PSG9Q00887 426 aa10.19□□□□□ -0.78
SMCO4-205ENST00000529714 GTSCR1Q86UQ5 136 aa10.19□□□□□ -0.78
SMCO4-205ENST00000529714 WFDC3Q8IUB2 231 aa10.19□□□□□ -0.78
SMCO4-205ENST00000529714 TRAV8-2A0A0B4J237 113 aa10.18□□□□□ -0.78
SMCO4-205ENST00000529714 SLC17A3O00476 420 aa10.18□□□□□ -0.78
SMCO4-205ENST00000529714 PPT1P50897 306 aa10.18□□□□□ -0.78
SMCO4-205ENST00000529714 FGF8P55075 233 aaPredicted RBP10.18□□□□□ -0.78
SMCO4-205ENST00000529714 KRTAP10-11P60412 298 aa10.18□□□□□ -0.78
SMCO4-205ENST00000529714 ZNF767PQ75MW2 155 aa10.18□□□□□ -0.78
SMCO4-205ENST00000529714 BLNKQ8WV28 456 aa10.18□□□□□ -0.78
SMCO4-205ENST00000529714 PRELID1Q9Y255 219 aa10.18□□□□□ -0.78
SMCO4-205ENST00000529714 ARL2-SNX15V9GYD0 113 aa10.18□□□□□ -0.78
SMCO4-205ENST00000529714 NBEAL1Q6ZS30 2694 aa10.18□□□□□ -0.78
SMCO4-205ENST00000529714 H3BTX0 84 aa10.17□□□□□ -0.78
SMCO4-205ENST00000529714 SNRPCP09234 159 aaKnown RBP10.17□□□□□ -0.78
SMCO4-205ENST00000529714 ZNF688P0C7X2 276 aa10.17□□□□□ -0.78
SMCO4-205ENST00000529714 CD81P60033 236 aa10.17□□□□□ -0.78
SMCO4-205ENST00000529714 PMS2P11Q13670 270 aa10.17□□□□□ -0.78
SMCO4-205ENST00000529714 ODF3L2Q3SX64 289 aa10.17□□□□□ -0.78
SMCO4-205ENST00000529714 IQCF2Q8IXL9 164 aa10.17□□□□□ -0.78
SMCO4-205ENST00000529714 FAM24BQ8N5W8 94 aa10.17□□□□□ -0.78
SMCO4-205ENST00000529714 LYPD6BQ8NI32 183 aa10.17□□□□□ -0.78
SMCO4-205ENST00000529714 MRPL53Q96EL3 112 aaKnown RBP10.17□□□□□ -0.78
SMCO4-205ENST00000529714 AAMDCQ9H7C9 122 aa10.17□□□□□ -0.78
SMCO4-205ENST00000529714 MAP6D1Q9H9H5 199 aa10.17□□□□□ -0.78
SMCO4-205ENST00000529714 A0A1W2PRE2 83 aa10.16□□□□□ -0.78
SMCO4-205ENST00000529714 OR11H12B2RN74 326 aa10.16□□□□□ -0.78
SMCO4-205ENST00000529714 CD7P09564 240 aa10.16□□□□□ -0.78
SMCO4-205ENST00000529714 ARL6IP6Q8N6S5 226 aa10.16□□□□□ -0.78
SMCO4-205ENST00000529714 NKX6-2Q9C056 277 aaPredicted RBP10.16□□□□□ -0.78
SMCO4-205ENST00000529714 TMPRSS5Q9H3S3 457 aa10.16□□□□□ -0.78
SMCO4-205ENST00000529714 C19orf73Q9NVV2 129 aa10.16□□□□□ -0.78
SMCO4-205ENST00000529714 DEFB131AP59861 70 aa10.15□□□□□ -0.78
SMCO4-205ENST00000529714 RANP62826 216 aaKnown RBP10.15□□□□□ -0.78
SMCO4-205ENST00000529714 IFITM2Q01629 132 aa10.15□□□□□ -0.78
SMCO4-205ENST00000529714 PSG3Q16557 428 aa10.15□□□□□ -0.78
SMCO4-205ENST00000529714 PSMG4Q5JS54 123 aa10.15□□□□□ -0.78
SMCO4-205ENST00000529714 Q8N1Y9 231 aa10.15□□□□□ -0.78
SMCO4-205ENST00000529714 LINC00052Q96N35 136 aa10.15□□□□□ -0.78
SMCO4-205ENST00000529714 Q9H3A6 140 aa10.15□□□□□ -0.78
SMCO4-205ENST00000529714 MANBALQ9NQG1 85 aa10.15□□□□□ -0.78
SMCO4-205ENST00000529714 OTORQ9NRC9 128 aa10.15□□□□□ -0.78
SMCO4-205ENST00000529714 NOTCH1P46531 2555 aa10.15□□□□□ -0.79
SMCO4-205ENST00000529714 NMBP08949 121 aa10.14□□□□□ -0.79
SMCO4-205ENST00000529714 ICAM4Q14773 271 aa10.14□□□□□ -0.79
SMCO4-205ENST00000529714 IGFL4Q6B9Z1 124 aa10.14□□□□□ -0.79
SMCO4-205ENST00000529714 EXOC3-AS1Q8N2X6 119 aa10.14□□□□□ -0.79
SMCO4-205ENST00000529714 RNF182Q8N6D2 247 aa10.14□□□□□ -0.79
SMCO4-205ENST00000529714 C20orf173Q96LM9 149 aa10.14□□□□□ -0.79
SMCO4-205ENST00000529714 PRR25Q96S07 402 aa10.14□□□□□ -0.79
SMCO4-205ENST00000529714 A0A1B0GV50 99 aa10.13□□□□□ -0.79
SMCO4-205ENST00000529714 FAM74A7A6NL05 159 aa10.13□□□□□ -0.79
SMCO4-205ENST00000529714 HLA-DMBP28068 263 aa10.13□□□□□ -0.79
SMCO4-205ENST00000529714 TAGLN2P37802 199 aaKnown RBP10.13□□□□□ -0.79
SMCO4-205ENST00000529714 CCL20P78556 96 aa10.13□□□□□ -0.79
SMCO4-205ENST00000529714 FOXI2Q6ZQN5 318 aa10.13□□□□□ -0.79
SMCO4-205ENST00000529714 ZNF738Q8NE65 137 aa10.13□□□□□ -0.79
SMCO4-205ENST00000529714 RXFP4Q8TDU9 374 aa10.13□□□□□ -0.79
SMCO4-205ENST00000529714 YTHDF2Q9Y5A9 579 aaKnown RBP10.13□□□□□ -0.79
SMCO4-205ENST00000529714 PGPA6NDG6 321 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms