RNA–Protein interactions for RNA: ENST00000528907.5

UBXN1-209, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 861 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-209ENST00000528907 FAM122CQ6P4D5 195 aa10.71□□□□□ -0.69
UBXN1-209ENST00000528907 DPPA3Q6W0C5 159 aa10.71□□□□□ -0.69
UBXN1-209ENST00000528907 SAT2Q96F10 170 aaPredicted RBP10.71□□□□□ -0.69
UBXN1-209ENST00000528907 ZNF503Q96F45 646 aa10.71□□□□□ -0.69
UBXN1-209ENST00000528907 SLC50A1Q9BRV3 221 aa10.71□□□□□ -0.69
UBXN1-209ENST00000528907 ACTR3CQ9C0K3 210 aaPredicted RBP10.71□□□□□ -0.69
UBXN1-209ENST00000528907 OR11H12B2RN74 326 aa10.7□□□□□ -0.7
UBXN1-209ENST00000528907 H3BQ15 152 aa10.7□□□□□ -0.7
UBXN1-209ENST00000528907 SNRPD3P62318 126 aaKnown RBP10.7□□□□□ -0.7
UBXN1-209ENST00000528907 WFDC3Q8IUB2 231 aa10.7□□□□□ -0.7
UBXN1-209ENST00000528907 FAM24BQ8N5W8 94 aa10.7□□□□□ -0.7
UBXN1-209ENST00000528907 SUN5Q8TC36 379 aa10.7□□□□□ -0.7
UBXN1-209ENST00000528907 RAB24Q969Q5 203 aa10.7□□□□□ -0.7
UBXN1-209ENST00000528907 PHYHIPLQ96FC7 376 aa10.7□□□□□ -0.7
UBXN1-209ENST00000528907 ZNF331Q9NQX6 463 aaPredicted RBP10.7□□□□□ -0.7
UBXN1-209ENST00000528907 ZNF586Q9NXT0 402 aa10.7□□□□□ -0.7
UBXN1-209ENST00000528907 PLA2G2EQ9NZK7 142 aa10.7□□□□□ -0.7
UBXN1-209ENST00000528907 TRBV19A0A075B6N1 114 aa10.69□□□□□ -0.7
UBXN1-209ENST00000528907 TRAV8-2A0A0B4J237 113 aa10.69□□□□□ -0.7
UBXN1-209ENST00000528907 CTXND1A0A1B0GTU2 59 aa10.69□□□□□ -0.7
UBXN1-209ENST00000528907 RAB5CP51148 216 aa10.69□□□□□ -0.7
UBXN1-209ENST00000528907 NKX2-5P52952 324 aaPredicted RBP10.69□□□□□ -0.7
UBXN1-209ENST00000528907 RNF141Q8WVD5 230 aa10.69□□□□□ -0.7
UBXN1-209ENST00000528907 FXYD5Q96DB9 178 aa10.69□□□□□ -0.7
UBXN1-209ENST00000528907 C16orf92Q96LL3 132 aa10.69□□□□□ -0.7
UBXN1-209ENST00000528907 PAXXQ9BUH6 204 aa10.69□□□□□ -0.7
UBXN1-209ENST00000528907 PRB2P02812 416 aaPredicted RBP10.68□□□□□ -0.7
UBXN1-209ENST00000528907 NBEAP1P0C6P0 100 aa10.68□□□□□ -0.7
UBXN1-209ENST00000528907 ZNF688P0C7X2 276 aa10.68□□□□□ -0.7
UBXN1-209ENST00000528907 PYYP10082 97 aa10.68□□□□□ -0.7
UBXN1-209ENST00000528907 DEFB131AP59861 70 aa10.68□□□□□ -0.7
UBXN1-209ENST00000528907 ZNF726P1Q15940 193 aa10.68□□□□□ -0.7
UBXN1-209ENST00000528907 LINC00322Q6ZN03 302 aaPredicted RBP10.68□□□□□ -0.7
UBXN1-209ENST00000528907 TMED6Q8WW62 240 aa10.68□□□□□ -0.7
UBXN1-209ENST00000528907 KMT2CQ8NEZ4 4911 aaKnown RBP10.67□□□□□ -0.7
UBXN1-209ENST00000528907 OR7C2O60412 319 aa10.67□□□□□ -0.7
UBXN1-209ENST00000528907 NDUFB4O95168 129 aa10.67□□□□□ -0.7
UBXN1-209ENST00000528907 CXorf1O96002 111 aa10.67□□□□□ -0.7
UBXN1-209ENST00000528907 IGHV4-30-4P0DP06 118 aa10.67□□□□□ -0.7
UBXN1-209ENST00000528907 PSG9Q00887 426 aa10.67□□□□□ -0.7
UBXN1-209ENST00000528907 LYPD1Q8N2G4 141 aa10.67□□□□□ -0.7
UBXN1-209ENST00000528907 MBD3L1Q8WWY6 194 aa10.67□□□□□ -0.7
UBXN1-209ENST00000528907 UBQLN2Q9UHD9 624 aa10.67□□□□□ -0.7
UBXN1-209ENST00000528907 SULT1A2P50226 295 aa10.66□□□□□ -0.7
UBXN1-209ENST00000528907 UBE2L3P68036 154 aaKnown RBP10.66□□□□□ -0.7
UBXN1-209ENST00000528907 PSMG4Q5JS54 123 aa10.66□□□□□ -0.7
UBXN1-209ENST00000528907 SSX7Q7RTT5 188 aa10.66□□□□□ -0.7
UBXN1-209ENST00000528907 DEFB125Q8N687 156 aa10.66□□□□□ -0.7
UBXN1-209ENST00000528907 MRPL53Q96EL3 112 aaKnown RBP10.66□□□□□ -0.7
UBXN1-209ENST00000528907 CLUHP3Q96NS8 147 aa10.66□□□□□ -0.7
UBXN1-209ENST00000528907 CITED4Q96RK1 184 aa10.66□□□□□ -0.7
UBXN1-209ENST00000528907 PRELID1Q9Y255 219 aa10.66□□□□□ -0.7
UBXN1-209ENST00000528907 BOLA2-SMG1P6H3BVE0 249 aa10.65□□□□□ -0.7
UBXN1-209ENST00000528907 SLC17A3O00476 420 aa10.65□□□□□ -0.7
UBXN1-209ENST00000528907 OR10J4P0C629 311 aa10.65□□□□□ -0.7
UBXN1-209ENST00000528907 ARL14EPLP0DKL9 152 aa10.65□□□□□ -0.7
UBXN1-209ENST00000528907 PSG3Q16557 428 aa10.65□□□□□ -0.7
UBXN1-209ENST00000528907 FOXI2Q6ZQN5 318 aa10.65□□□□□ -0.7
UBXN1-209ENST00000528907 ARL6IP6Q8N6S5 226 aa10.65□□□□□ -0.7
UBXN1-209ENST00000528907 LRRC20Q8TCA0 184 aa10.65□□□□□ -0.7
UBXN1-209ENST00000528907 MRAPQ8TCY5 172 aa10.65□□□□□ -0.7
UBXN1-209ENST00000528907 C20orf173Q96LM9 149 aa10.65□□□□□ -0.7
UBXN1-209ENST00000528907 WFDC10AQ9H1F0 79 aa10.65□□□□□ -0.7
UBXN1-209ENST00000528907 SAV1Q9H4B6 383 aaPredicted RBP10.65□□□□□ -0.7
UBXN1-209ENST00000528907 SRD5A3Q9H8P0 318 aa10.65□□□□□ -0.7
UBXN1-209ENST00000528907 TMEM167BQ9NRX6 74 aa10.65□□□□□ -0.7
UBXN1-209ENST00000528907 A8MTW9 85 aa10.64□□□□□ -0.71
UBXN1-209ENST00000528907 GCHFRP30047 84 aa10.64□□□□□ -0.71
UBXN1-209ENST00000528907 APRG1Q8IVJ8 170 aa10.64□□□□□ -0.71
UBXN1-209ENST00000528907 LINC00052Q96N35 136 aa10.64□□□□□ -0.71
UBXN1-209ENST00000528907 BOLA1Q9Y3E2 137 aa10.64□□□□□ -0.71
UBXN1-209ENST00000528907 MAP1LC3B2A6NCE7 125 aa10.63□□□□□ -0.71
UBXN1-209ENST00000528907 HMGB3O15347 200 aaKnown RBP10.63□□□□□ -0.71
UBXN1-209ENST00000528907 EIF3GO75821 320 aaKnown RBP eCLIP10.63□□□□□ -0.71
UBXN1-209ENST00000528907 HLA-DRB4P13762 266 aa10.63□□□□□ -0.71
UBXN1-209ENST00000528907 FHITP49789 147 aa10.63□□□□□ -0.71
UBXN1-209ENST00000528907 MAP1LC3BQ9GZQ8 125 aa10.63□□□□□ -0.71
UBXN1-209ENST00000528907 AAMDCQ9H7C9 122 aa10.63□□□□□ -0.71
UBXN1-209ENST00000528907 TUBA4BQ9H853 241 aa10.63□□□□□ -0.71
UBXN1-209ENST00000528907 HLA-DRB4X5D2U9 266 aa10.63□□□□□ -0.71
UBXN1-209ENST00000528907 RYR3Q15413 4870 aa10.62□□□□□ -0.71
UBXN1-209ENST00000528907 LOC102724200A0A096LPH7 203 aaPredicted RBP10.62□□□□□ -0.71
UBXN1-209ENST00000528907 TRAV1-1A0A0B4J248 108 aa10.62□□□□□ -0.71
UBXN1-209ENST00000528907 KIR2DL5BA0A0G2JN68 375 aa10.62□□□□□ -0.71
UBXN1-209ENST00000528907 KIR2DL5BA0A0G2JPC4 375 aa10.62□□□□□ -0.71
UBXN1-209ENST00000528907 A0A0J9YX75 114 aa10.62□□□□□ -0.71
UBXN1-209ENST00000528907 RBMY1BA6NDE4 496 aaKnown RBP10.62□□□□□ -0.71
UBXN1-209ENST00000528907 RBMY1EA6NEQ0 496 aaKnown RBP10.62□□□□□ -0.71
UBXN1-209ENST00000528907 H3BMM0 161 aa10.62□□□□□ -0.71
UBXN1-209ENST00000528907 H3BTX0 84 aa10.62□□□□□ -0.71
UBXN1-209ENST00000528907 SNRPCP09234 159 aaKnown RBP10.62□□□□□ -0.71
UBXN1-209ENST00000528907 RBMY1DP0C7P1 496 aaKnown RBP10.62□□□□□ -0.71
UBXN1-209ENST00000528907 FRMD6-AS1P0C7T7 363 aa10.62□□□□□ -0.71
UBXN1-209ENST00000528907 ZNF124Q15973 351 aa10.62□□□□□ -0.71
UBXN1-209ENST00000528907 DEFB121Q5J5C9 76 aa10.62□□□□□ -0.71
UBXN1-209ENST00000528907 IGFL4Q6B9Z1 124 aa10.62□□□□□ -0.71
UBXN1-209ENST00000528907 TRPT1Q86TN4 253 aaKnown RBP10.62□□□□□ -0.71
UBXN1-209ENST00000528907 KIR2DL5AQ8N109 375 aa10.62□□□□□ -0.71
UBXN1-209ENST00000528907 RNF182Q8N6D2 247 aa10.62□□□□□ -0.71
UBXN1-209ENST00000528907 KIR2DL5BQ8NHK3 375 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms