RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 RNF24Q9Y225 148 aa11.19□□□□□ -0.62
CAPN1-213ENST00000527897 WDR83OSQ9Y284 106 aa11.19□□□□□ -0.62
CAPN1-213ENST00000527897 A0A087X0K7 114 aa11.18□□□□□ -0.62
CAPN1-213ENST00000527897 ZNF705FA8MVS1 300 aaPredicted RBP11.18□□□□□ -0.62
CAPN1-213ENST00000527897 M0R2Z0 102 aa11.18□□□□□ -0.62
CAPN1-213ENST00000527897 PRAF2O60831 178 aa11.18□□□□□ -0.62
CAPN1-213ENST00000527897 RLN2P04090 185 aa11.18□□□□□ -0.62
CAPN1-213ENST00000527897 CXCL3P19876 107 aa11.18□□□□□ -0.62
CAPN1-213ENST00000527897 RHOBP62745 196 aa11.18□□□□□ -0.62
CAPN1-213ENST00000527897 HIST1H1AQ02539 215 aaPredicted RBP11.18□□□□□ -0.62
CAPN1-213ENST00000527897 MORN5Q5VZ52 161 aa11.18□□□□□ -0.62
CAPN1-213ENST00000527897 BPIFA4PQ86YQ2 179 aa11.18□□□□□ -0.62
CAPN1-213ENST00000527897 TMEM37Q8WXS4 190 aa11.18□□□□□ -0.62
CAPN1-213ENST00000527897 PPP1R14DQ9NXH3 145 aa11.18□□□□□ -0.62
CAPN1-213ENST00000527897 TRAV10A0A0B4J240 114 aa11.17□□□□□ -0.62
CAPN1-213ENST00000527897 HBE1P02100 147 aa11.17□□□□□ -0.62
CAPN1-213ENST00000527897 OPCMLQ14982 345 aa11.17□□□□□ -0.62
CAPN1-213ENST00000527897 PSG3Q16557 428 aa11.17□□□□□ -0.62
CAPN1-213ENST00000527897 C12orf74Q32Q52 190 aa11.17□□□□□ -0.62
CAPN1-213ENST00000527897 C1orf158Q8N1D5 194 aa11.17□□□□□ -0.62
CAPN1-213ENST00000527897 OR11H7Q8NGC8 314 aa11.17□□□□□ -0.62
CAPN1-213ENST00000527897 NEU1Q99519 415 aa11.17□□□□□ -0.62
CAPN1-213ENST00000527897 DNAJC4Q9NNZ3 241 aa11.17□□□□□ -0.62
CAPN1-213ENST00000527897 BATF3Q9NR55 127 aa11.17□□□□□ -0.62
CAPN1-213ENST00000527897 RFNGQ9Y644 331 aa11.17□□□□□ -0.62
CAPN1-213ENST00000527897 TRAV5A0A0B4J249 113 aa11.16□□□□□ -0.62
CAPN1-213ENST00000527897 SMIM9A6NGZ8 99 aa11.16□□□□□ -0.62
CAPN1-213ENST00000527897 MRPS12O15235 138 aaKnown RBP11.16□□□□□ -0.62
CAPN1-213ENST00000527897 SSNA1O43805 119 aa11.16□□□□□ -0.62
CAPN1-213ENST00000527897 B2MP61769 119 aa11.16□□□□□ -0.62
CAPN1-213ENST00000527897 NHLH2Q02577 135 aa11.16□□□□□ -0.62
CAPN1-213ENST00000527897 LCN15Q6UWW0 184 aa11.16□□□□□ -0.62
CAPN1-213ENST00000527897 AMTNQ6UX39 209 aa11.16□□□□□ -0.62
CAPN1-213ENST00000527897 OR1L4Q8NGR5 311 aa11.16□□□□□ -0.62
CAPN1-213ENST00000527897 RPUSD4Q96CM3 377 aaKnown RBP11.16□□□□□ -0.62
CAPN1-213ENST00000527897 OR5AC2Q9NZP5 309 aa11.16□□□□□ -0.62
CAPN1-213ENST00000527897 EPPK1P58107 5090 aaKnown RBP11.15□□□□□ -0.62
CAPN1-213ENST00000527897 TRAV12-2A0A075B6T6 113 aa11.15□□□□□ -0.62
CAPN1-213ENST00000527897 DEFB131BA0A096LNP1 70 aa11.15□□□□□ -0.62
CAPN1-213ENST00000527897 LOC102723971A0A1B0GUV8 181 aa11.15□□□□□ -0.62
CAPN1-213ENST00000527897 TMEM189A5PLL7 270 aa11.15□□□□□ -0.62
CAPN1-213ENST00000527897 INSP01308 110 aa11.15□□□□□ -0.62
CAPN1-213ENST00000527897 SPART-AS1P0CW21 52 aa11.15□□□□□ -0.62
CAPN1-213ENST00000527897 ATP6V1FQ16864 119 aa11.15□□□□□ -0.62
CAPN1-213ENST00000527897 RRN3P1Q2M238 152 aa11.15□□□□□ -0.62
CAPN1-213ENST00000527897 VWC2Q2TAL6 325 aa11.15□□□□□ -0.62
CAPN1-213ENST00000527897 BAP18Q8IXM2 172 aa11.15□□□□□ -0.62
CAPN1-213ENST00000527897 OR8A1Q8NGG7 326 aa11.15□□□□□ -0.62
CAPN1-213ENST00000527897 THAP6Q8TBB0 222 aa11.15□□□□□ -0.62
CAPN1-213ENST00000527897 IGF2BP2-AS1Q96M15 143 aa11.15□□□□□ -0.62
CAPN1-213ENST00000527897 PFDN5Q99471 154 aa11.15□□□□□ -0.62
CAPN1-213ENST00000527897 NMES1Q9C002 83 aa11.15□□□□□ -0.62
CAPN1-213ENST00000527897 SLC25A31Q9H0C2 315 aa11.15□□□□□ -0.62
CAPN1-213ENST00000527897 SLC39A9Q9NUM3 307 aa11.15□□□□□ -0.62
CAPN1-213ENST00000527897 PXMP4Q9Y6I8 212 aa11.15□□□□□ -0.62
CAPN1-213ENST00000527897 A8MTW9 85 aa11.14□□□□□ -0.63
CAPN1-213ENST00000527897 E5RGE8 158 aa11.14□□□□□ -0.63
CAPN1-213ENST00000527897 BOLA2-SMG1P6H3BVE0 249 aa11.14□□□□□ -0.63
CAPN1-213ENST00000527897 SLC17A3O00476 420 aa11.14□□□□□ -0.63
CAPN1-213ENST00000527897 AMBPP02760 352 aa11.14□□□□□ -0.63
CAPN1-213ENST00000527897 CXCL2P19875 107 aa11.14□□□□□ -0.63
CAPN1-213ENST00000527897 RPL29P47914 159 aaKnown RBP11.14□□□□□ -0.63
CAPN1-213ENST00000527897 PRR20EP86478 221 aa11.14□□□□□ -0.63
CAPN1-213ENST00000527897 PRR20CP86479 221 aa11.14□□□□□ -0.63
CAPN1-213ENST00000527897 PRR20DP86480 221 aa11.14□□□□□ -0.63
CAPN1-213ENST00000527897 PRR20BP86481 221 aa11.14□□□□□ -0.63
CAPN1-213ENST00000527897 PRR20AP86496 221 aa11.14□□□□□ -0.63
CAPN1-213ENST00000527897 CLINT1Q14677 625 aa11.14□□□□□ -0.63
CAPN1-213ENST00000527897 LGALS9CQ6DKI2 356 aa11.14□□□□□ -0.63
CAPN1-213ENST00000527897 RPP25LQ8N5L8 163 aaKnown RBP11.14□□□□□ -0.63
CAPN1-213ENST00000527897 OR5C1Q8NGR4 320 aa11.14□□□□□ -0.63
CAPN1-213ENST00000527897 SLC50A1Q9BRV3 221 aa11.14□□□□□ -0.63
CAPN1-213ENST00000527897 MARVELD1Q9BSK0 173 aa11.14□□□□□ -0.63
CAPN1-213ENST00000527897 ZNF331Q9NQX6 463 aaPredicted RBP11.14□□□□□ -0.63
CAPN1-213ENST00000527897 IGHV4-4A0A075B6R2 117 aa11.13□□□□□ -0.63
CAPN1-213ENST00000527897 ZNF705GA8MUZ8 300 aaPredicted RBP11.13□□□□□ -0.63
CAPN1-213ENST00000527897 PRM2P04554 102 aa11.13□□□□□ -0.63
CAPN1-213ENST00000527897 CYCSP99999 105 aaKnown RBP11.13□□□□□ -0.63
CAPN1-213ENST00000527897 FAM222AQ5U5X8 452 aa11.13□□□□□ -0.63
CAPN1-213ENST00000527897 PLA2G2EQ9NZK7 142 aa11.13□□□□□ -0.63
CAPN1-213ENST00000527897 APLNQ9ULZ1 77 aa11.13□□□□□ -0.63
CAPN1-213ENST00000527897 H0YIZ8 118 aa11.12□□□□□ -0.63
CAPN1-213ENST00000527897 H3BQ15 152 aa11.12□□□□□ -0.63
CAPN1-213ENST00000527897 IGLC2P0DOY2 106 aa11.12□□□□□ -0.63
CAPN1-213ENST00000527897 HTN3P15516 51 aa11.12□□□□□ -0.63
CAPN1-213ENST00000527897 H2BFSP57053 126 aa11.12□□□□□ -0.63
CAPN1-213ENST00000527897 TCTAP57738 103 aa11.12□□□□□ -0.63
CAPN1-213ENST00000527897 PPP1R1CQ8WVI7 109 aa11.12□□□□□ -0.63
CAPN1-213ENST00000527897 NPCDR1Q9BY65 106 aa11.12□□□□□ -0.63
CAPN1-213ENST00000527897 YTHDF2Q9Y5A9 579 aaKnown RBP11.12□□□□□ -0.63
CAPN1-213ENST00000527897 KMT2AQ03164 3969 aa11.12□□□□□ -0.63
CAPN1-213ENST00000527897 CRXO43186 299 aaPredicted RBP11.11□□□□□ -0.63
CAPN1-213ENST00000527897 MPDU1O75352 247 aa11.11□□□□□ -0.63
CAPN1-213ENST00000527897 HTN1P15515 57 aa11.11□□□□□ -0.63
CAPN1-213ENST00000527897 GCSAMLQ5JQS6 135 aa11.11□□□□□ -0.63
CAPN1-213ENST00000527897 OR10J6PQ8NGY7 276 aa11.11□□□□□ -0.63
CAPN1-213ENST00000527897 NIPSNAP3BQ9BS92 247 aa11.11□□□□□ -0.63
CAPN1-213ENST00000527897 DKK2Q9UBU2 259 aa11.11□□□□□ -0.63
CAPN1-213ENST00000527897 VPS13DQ5THJ4 4388 aa11.1□□□□□ -0.63
CAPN1-213ENST00000527897 PRAC2D3DTV9 90 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms