RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 SUN5Q8TC36 379 aa7.95□□□□□ -1.14
NEDD8-205ENST00000527046 RAB24Q969Q5 203 aa7.95□□□□□ -1.14
NEDD8-205ENST00000527046 ZNF471Q9BX82 626 aaPredicted RBP7.95□□□□□ -1.14
NEDD8-205ENST00000527046 MRPL32Q9BYC8 188 aaKnown RBP7.95□□□□□ -1.14
NEDD8-205ENST00000527046 ZNF331Q9NQX6 463 aaPredicted RBP7.95□□□□□ -1.14
NEDD8-205ENST00000527046 TRBV19A0A075B6N1 114 aa7.94□□□□□ -1.14
NEDD8-205ENST00000527046 HMGB3O15347 200 aaKnown RBP7.94□□□□□ -1.14
NEDD8-205ENST00000527046 STAG3L2P0CL84 134 aa7.94□□□□□ -1.14
NEDD8-205ENST00000527046 STAG3L3P0CL85 134 aa7.94□□□□□ -1.14
NEDD8-205ENST00000527046 PRB4P10163 310 aaPredicted RBP7.94□□□□□ -1.14
NEDD8-205ENST00000527046 HIST1H1EP10412 219 aaKnown RBP7.94□□□□□ -1.14
NEDD8-205ENST00000527046 RHOBP62745 196 aa7.94□□□□□ -1.14
NEDD8-205ENST00000527046 TMEM41BQ5BJD5 291 aa7.94□□□□□ -1.14
NEDD8-205ENST00000527046 FAM122CQ6P4D5 195 aa7.94□□□□□ -1.14
NEDD8-205ENST00000527046 GTSCR1Q86UQ5 136 aa7.94□□□□□ -1.14
NEDD8-205ENST00000527046 RNF182Q8N6D2 247 aa7.94□□□□□ -1.14
NEDD8-205ENST00000527046 MRAPQ8TCY5 172 aa7.94□□□□□ -1.14
NEDD8-205ENST00000527046 RNF141Q8WVD5 230 aa7.94□□□□□ -1.14
NEDD8-205ENST00000527046 OR51M1Q9H341 326 aa7.94□□□□□ -1.14
NEDD8-205ENST00000527046 KNCNA6PVL3 124 aa7.93□□□□□ -1.14
NEDD8-205ENST00000527046 PRAC2D3DTV9 90 aa7.93□□□□□ -1.14
NEDD8-205ENST00000527046 F6UB75 175 aa7.93□□□□□ -1.14
NEDD8-205ENST00000527046 BOLA2-SMG1P6H3BVE0 249 aa7.93□□□□□ -1.14
NEDD8-205ENST00000527046 ISLRO14498 428 aa7.93□□□□□ -1.14
NEDD8-205ENST00000527046 GIG44P09565 113 aaPredicted RBP7.93□□□□□ -1.14
NEDD8-205ENST00000527046 NBEAP1P0C6P0 100 aa7.93□□□□□ -1.14
NEDD8-205ENST00000527046 FRMD6-AS1P0C7T7 363 aa7.93□□□□□ -1.14
NEDD8-205ENST00000527046 S100A7P31151 101 aa7.93□□□□□ -1.14
NEDD8-205ENST00000527046 PSMB3P49720 205 aa7.93□□□□□ -1.14
NEDD8-205ENST00000527046 DEFB121Q5J5C9 76 aa7.93□□□□□ -1.14
NEDD8-205ENST00000527046 PSMG4Q5JS54 123 aa7.93□□□□□ -1.14
NEDD8-205ENST00000527046 SBSPONQ8IVN8 264 aa7.93□□□□□ -1.14
NEDD8-205ENST00000527046 TMED6Q8WW62 240 aa7.93□□□□□ -1.14
NEDD8-205ENST00000527046 SRD5A3Q9H8P0 318 aa7.93□□□□□ -1.14
NEDD8-205ENST00000527046 A8MTW9 85 aa7.92□□□□□ -1.14
NEDD8-205ENST00000527046 ZNF705FA8MVS1 300 aaPredicted RBP7.92□□□□□ -1.14
NEDD8-205ENST00000527046 PFDN1O60925 122 aa7.92□□□□□ -1.14
NEDD8-205ENST00000527046 ZNF253O75346 499 aa7.92□□□□□ -1.14
NEDD8-205ENST00000527046 MBP02144 154 aa7.92□□□□□ -1.14
NEDD8-205ENST00000527046 OR10J4P0C629 311 aa7.92□□□□□ -1.14
NEDD8-205ENST00000527046 ATF4P18848 351 aaPredicted RBP7.92□□□□□ -1.14
NEDD8-205ENST00000527046 MEOX2P50222 304 aa7.92□□□□□ -1.14
NEDD8-205ENST00000527046 CMC4P56277 68 aaPredicted RBP7.92□□□□□ -1.14
NEDD8-205ENST00000527046 PSG3Q16557 428 aa7.92□□□□□ -1.14
NEDD8-205ENST00000527046 S100A7AQ86SG5 101 aa7.92□□□□□ -1.14
NEDD8-205ENST00000527046 SLC51BQ86UW2 128 aa7.92□□□□□ -1.14
NEDD8-205ENST00000527046 MBD3L1Q8WWY6 194 aa7.92□□□□□ -1.14
NEDD8-205ENST00000527046 PAXXQ9BUH6 204 aa7.92□□□□□ -1.14
NEDD8-205ENST00000527046 A0A1W2PPV4 95 aa7.91□□□□□ -1.14
NEDD8-205ENST00000527046 H3BMM0 161 aa7.91□□□□□ -1.14
NEDD8-205ENST00000527046 ARL14EPLP0DKL9 152 aa7.91□□□□□ -1.14
NEDD8-205ENST00000527046 TPT1P13693 172 aaKnown RBP7.91□□□□□ -1.14
NEDD8-205ENST00000527046 CDC34P49427 236 aaPredicted RBP7.91□□□□□ -1.14
NEDD8-205ENST00000527046 GUK1Q16774 197 aa7.91□□□□□ -1.14
NEDD8-205ENST00000527046 HAGHQ16775 308 aa7.91□□□□□ -1.14
NEDD8-205ENST00000527046 LCN15Q6UWW0 184 aa7.91□□□□□ -1.14
NEDD8-205ENST00000527046 TRPT1Q86TN4 253 aaKnown RBP7.91□□□□□ -1.14
NEDD8-205ENST00000527046 EXOC3-AS1Q8N2X6 119 aa7.91□□□□□ -1.14
NEDD8-205ENST00000527046 PHYHIPLQ96FC7 376 aa7.91□□□□□ -1.14
NEDD8-205ENST00000527046 C16orf92Q96LL3 132 aa7.91□□□□□ -1.14
NEDD8-205ENST00000527046 LINC00052Q96N35 136 aa7.91□□□□□ -1.14
NEDD8-205ENST00000527046 ACTR3CQ9C0K3 210 aaPredicted RBP7.91□□□□□ -1.14
NEDD8-205ENST00000527046 TMPRSS5Q9H3S3 457 aa7.91□□□□□ -1.14
NEDD8-205ENST00000527046 SAV1Q9H4B6 383 aaPredicted RBP7.91□□□□□ -1.14
NEDD8-205ENST00000527046 RNF24Q9Y225 148 aa7.91□□□□□ -1.14
NEDD8-205ENST00000527046 DNAH9Q9NYC9 4486 aa7.9□□□□□ -1.14
NEDD8-205ENST00000527046 A0A0J9YX75 114 aa7.9□□□□□ -1.14
NEDD8-205ENST00000527046 CTXND1A0A1B0GTU2 59 aa7.9□□□□□ -1.14
NEDD8-205ENST00000527046 M0R3E3 92 aa7.9□□□□□ -1.14
NEDD8-205ENST00000527046 ZNF705DP0CH99 300 aaPredicted RBP7.9□□□□□ -1.14
NEDD8-205ENST00000527046 ZNF705BP0CI00 300 aaPredicted RBP7.9□□□□□ -1.14
NEDD8-205ENST00000527046 GCHFRP30047 84 aa7.9□□□□□ -1.14
NEDD8-205ENST00000527046 ID1P41134 155 aa7.9□□□□□ -1.14
NEDD8-205ENST00000527046 KHDC3LQ587J8 217 aa7.9□□□□□ -1.14
NEDD8-205ENST00000527046 AMTNQ6UX39 209 aa7.9□□□□□ -1.14
NEDD8-205ENST00000527046 PQLC2Q6ZP29 291 aa7.9□□□□□ -1.14
NEDD8-205ENST00000527046 BLNKQ8WV28 456 aa7.9□□□□□ -1.14
NEDD8-205ENST00000527046 B9D2Q9BPU9 175 aa7.9□□□□□ -1.14
NEDD8-205ENST00000527046 UMAD1C9J7I0 102 aa7.89□□□□□ -1.15
NEDD8-205ENST00000527046 OR7C2O60412 319 aa7.89□□□□□ -1.15
NEDD8-205ENST00000527046 HLA-DRB4P13762 266 aa7.89□□□□□ -1.15
NEDD8-205ENST00000527046 SULT1A2P50226 295 aa7.89□□□□□ -1.15
NEDD8-205ENST00000527046 FGF8P55075 233 aaPredicted RBP7.89□□□□□ -1.15
NEDD8-205ENST00000527046 TAS2R45P59539 299 aa7.89□□□□□ -1.15
NEDD8-205ENST00000527046 SNRPD3P62318 126 aaKnown RBP7.89□□□□□ -1.15
NEDD8-205ENST00000527046 EIF5AP63241 154 aaKnown RBP7.89□□□□□ -1.15
NEDD8-205ENST00000527046 CCL20P78556 96 aa7.89□□□□□ -1.15
NEDD8-205ENST00000527046 PDE6HQ13956 83 aa7.89□□□□□ -1.15
NEDD8-205ENST00000527046 ACTL10Q5JWF8 245 aa7.89□□□□□ -1.15
NEDD8-205ENST00000527046 FAM74A1Q5RGS3 127 aa7.89□□□□□ -1.15
NEDD8-205ENST00000527046 AKR1C8PQ5T2L2 129 aa7.89□□□□□ -1.15
NEDD8-205ENST00000527046 DMRTA1Q5VZB9 504 aa7.89□□□□□ -1.15
NEDD8-205ENST00000527046 CLUHP3Q96NS8 147 aa7.89□□□□□ -1.15
NEDD8-205ENST00000527046 ASCL2Q99929 193 aa7.89□□□□□ -1.15
NEDD8-205ENST00000527046 SLC50A1Q9BRV3 221 aa7.89□□□□□ -1.15
NEDD8-205ENST00000527046 HLA-DRB4X5D2U9 266 aa7.89□□□□□ -1.15
NEDD8-205ENST00000527046 LOC102724200A0A096LPH7 203 aaPredicted RBP7.88□□□□□ -1.15
NEDD8-205ENST00000527046 RPL35AP18077 110 aaKnown RBP7.88□□□□□ -1.15
NEDD8-205ENST00000527046 RANP62826 216 aaKnown RBP7.88□□□□□ -1.15
NEDD8-205ENST00000527046 UBE2L3P68036 154 aaKnown RBP7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms