RNA–Protein interactions for RNA: ENST00000526977.5

VPS28-207, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 5

Gene VPS28, Length 2,036 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-207ENST00000526977 SLC25A5P05141 298 aaKnown RBP14.6□□□□□ -0.07
VPS28-207ENST00000526977 ADMP35318 185 aa14.6□□□□□ -0.07
VPS28-207ENST00000526977 RAB9AP51151 201 aa14.6□□□□□ -0.07
VPS28-207ENST00000526977 CNN1P51911 297 aaKnown RBP14.6□□□□□ -0.07
VPS28-207ENST00000526977 TPPP2P59282 170 aa14.6□□□□□ -0.07
VPS28-207ENST00000526977 GNG5P63218 68 aa14.6□□□□□ -0.07
VPS28-207ENST00000526977 ZNF502Q8TBZ5 544 aa14.6□□□□□ -0.07
VPS28-207ENST00000526977 TRAV34A0A0B4J273 112 aa14.59□□□□□ -0.07
VPS28-207ENST00000526977 A0A0G2JLM5 398 aa14.59□□□□□ -0.07
VPS28-207ENST00000526977 GCGP01275 180 aa14.59□□□□□ -0.07
VPS28-207ENST00000526977 PSMB8P28062 276 aa14.59□□□□□ -0.07
VPS28-207ENST00000526977 FRZBQ92765 325 aa14.59□□□□□ -0.07
VPS28-207ENST00000526977 Q9H3A6 140 aa14.59□□□□□ -0.07
VPS28-207ENST00000526977 NSD1Q96L73 2696 aaPredicted RBP14.59□□□□□ -0.07
VPS28-207ENST00000526977 ZNF98A6NK75 572 aa14.59□□□□□ -0.07
VPS28-207ENST00000526977 BPIFA4PQ86YQ2 179 aa14.59□□□□□ -0.07
VPS28-207ENST00000526977 F8P00451 2351 aa14.59□□□□□ -0.07
VPS28-207ENST00000526977 SLC17A3O00476 420 aa14.58□□□□□ -0.08
VPS28-207ENST00000526977 ISLRO14498 428 aa14.58□□□□□ -0.08
VPS28-207ENST00000526977 ELANEP08246 267 aa14.58□□□□□ -0.08
VPS28-207ENST00000526977 ERVFC1-1P60608 527 aa14.58□□□□□ -0.08
VPS28-207ENST00000526977 KLK15Q9H2R5 256 aa14.58□□□□□ -0.08
VPS28-207ENST00000526977 PPP5D1E7EU14 171 aa14.58□□□□□ -0.08
VPS28-207ENST00000526977 MRPS12O15235 138 aaKnown RBP14.58□□□□□ -0.08
VPS28-207ENST00000526977 TRGC1P0CF51 173 aa14.58□□□□□ -0.08
VPS28-207ENST00000526977 FOXE3Q13461 319 aa14.58□□□□□ -0.08
VPS28-207ENST00000526977 C16orf95Q9H693 158 aa14.58□□□□□ -0.08
VPS28-207ENST00000526977 KLF12Q9Y4X4 402 aa14.58□□□□□ -0.08
VPS28-207ENST00000526977 TYMSP04818 313 aa14.57□□□□□ -0.08
VPS28-207ENST00000526977 CLEC3BP05452 202 aa14.57□□□□□ -0.08
VPS28-207ENST00000526977 IGLC2P0DOY2 106 aa14.57□□□□□ -0.08
VPS28-207ENST00000526977 TMEM183BQ1AE95 376 aa14.57□□□□□ -0.08
VPS28-207ENST00000526977 C5orf17Q8NAS9 161 aa14.57□□□□□ -0.08
VPS28-207ENST00000526977 ZNF414Q96IQ9 312 aa14.57□□□□□ -0.08
VPS28-207ENST00000526977 C17orf77Q96MU5 243 aa14.57□□□□□ -0.08
VPS28-207ENST00000526977 V9GYV3 84 aa14.57□□□□□ -0.08
VPS28-207ENST00000526977 TRBV19A0A075B6N1 114 aa14.56□□□□□ -0.08
VPS28-207ENST00000526977 HOXA5P20719 270 aa14.56□□□□□ -0.08
VPS28-207ENST00000526977 NDUFA6P56556 154 aa14.56□□□□□ -0.08
VPS28-207ENST00000526977 S100A7AQ86SG5 101 aa14.56□□□□□ -0.08
VPS28-207ENST00000526977 BAGE2Q86Y30 109 aa14.56□□□□□ -0.08
VPS28-207ENST00000526977 RNASE7Q9H1E1 156 aaKnown RBP14.56□□□□□ -0.08
VPS28-207ENST00000526977 OTORQ9NRC9 128 aa14.56□□□□□ -0.08
VPS28-207ENST00000526977 OSTCQ9NRP0 149 aa14.56□□□□□ -0.08
VPS28-207ENST00000526977 IL36BQ9NZH7 164 aa14.56□□□□□ -0.08
VPS28-207ENST00000526977 RNF24Q9Y225 148 aa14.56□□□□□ -0.08
VPS28-207ENST00000526977 MGST1P10620 155 aaKnown RBP14.56□□□□□ -0.08
VPS28-207ENST00000526977 GPR183P32249 361 aa14.56□□□□□ -0.08
VPS28-207ENST00000526977 NHLRC2Q8NBF2 726 aa14.56□□□□□ -0.08
VPS28-207ENST00000526977 OR4F17Q8NGA8 305 aa14.56□□□□□ -0.08
VPS28-207ENST00000526977 ATG101Q9BSB4 218 aa14.56□□□□□ -0.08
VPS28-207ENST00000526977 FN1P02751 2386 aaKnown RBP14.55□□□□□ -0.08
VPS28-207ENST00000526977 FAM209BQ5JX69 171 aa14.55□□□□□ -0.08
VPS28-207ENST00000526977 EXOC3-AS1Q8N2X6 119 aa14.55□□□□□ -0.08
VPS28-207ENST00000526977 CCDC140Q96MF4 163 aa14.55□□□□□ -0.08
VPS28-207ENST00000526977 CUBNO60494 3623 aa14.55□□□□□ -0.08
VPS28-207ENST00000526977 ZNF320A2RRD8 509 aa14.54□□□□□ -0.08
VPS28-207ENST00000526977 TCRAP04437 139 aa14.54□□□□□ -0.08
VPS28-207ENST00000526977 CLEC19AQ6UXS0 136 aa14.54□□□□□ -0.08
VPS28-207ENST00000526977 RNF152Q8N8N0 203 aa14.54□□□□□ -0.08
VPS28-207ENST00000526977 SGK494Q96LW2 274 aa14.54□□□□□ -0.08
VPS28-207ENST00000526977 RPH3ALQ9UNE2 315 aa14.54□□□□□ -0.08
VPS28-207ENST00000526977 IGHV3-35A0A0C4DH35 117 aa14.54□□□□□ -0.08
VPS28-207ENST00000526977 NDUFA7O95182 113 aa14.54□□□□□ -0.08
VPS28-207ENST00000526977 C10orf99Q6UWK7 81 aa14.54□□□□□ -0.08
VPS28-207ENST00000526977 KLHDC1Q8N7A1 406 aa14.54□□□□□ -0.08
VPS28-207ENST00000526977 UBE2G1P62253 170 aa14.53□□□□□ -0.08
VPS28-207ENST00000526977 TOMM20LQ6UXN7 152 aa14.53□□□□□ -0.08
VPS28-207ENST00000526977 BTF3L4Q96K17 158 aa14.53□□□□□ -0.08
VPS28-207ENST00000526977 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.53□□□□□ -0.08
VPS28-207ENST00000526977 S100A9P06702 114 aaKnown RBP14.53□□□□□ -0.08
VPS28-207ENST00000526977 LCNL1Q6ZST4 164 aa14.53□□□□□ -0.08
VPS28-207ENST00000526977 RABAC1Q9UI14 185 aa14.53□□□□□ -0.08
VPS28-207ENST00000526977 IBA57Q5T440 356 aaKnown RBP14.52□□□□□ -0.09
VPS28-207ENST00000526977 SIGLEC15Q6ZMC9 328 aa14.52□□□□□ -0.09
VPS28-207ENST00000526977 LYPD1Q8N2G4 141 aa14.52□□□□□ -0.09
VPS28-207ENST00000526977 LINC01006Q8NI28 216 aa14.52□□□□□ -0.09
VPS28-207ENST00000526977 MYOZ3Q8TDC0 251 aa14.52□□□□□ -0.09
VPS28-207ENST00000526977 IGHV3OR16-8A0A075B7F1 116 aa14.51□□□□□ -0.09
VPS28-207ENST00000526977 IFITM10A6NMD0 228 aa14.51□□□□□ -0.09
VPS28-207ENST00000526977 S100A8P05109 93 aa14.51□□□□□ -0.09
VPS28-207ENST00000526977 CDX1P47902 265 aaPredicted RBP14.51□□□□□ -0.09
VPS28-207ENST00000526977 MEOX2P50222 304 aa14.51□□□□□ -0.09
VPS28-207ENST00000526977 RPEL1Q2QD12 228 aa14.51□□□□□ -0.09
VPS28-207ENST00000526977 OR4X2Q8NGF9 303 aa14.51□□□□□ -0.09
VPS28-207ENST00000526977 FMC1Q96HJ9 113 aa14.51□□□□□ -0.09
VPS28-207ENST00000526977 GPR82Q96P67 336 aa14.51□□□□□ -0.09
VPS28-207ENST00000526977 C12orf57Q99622 126 aa14.51□□□□□ -0.09
VPS28-207ENST00000526977 ZFAND3Q9H8U3 227 aa14.51□□□□□ -0.09
VPS28-207ENST00000526977 BMPR1BO00238 502 aa14.51□□□□□ -0.09
VPS28-207ENST00000526977 RPLP1P05386 114 aaKnown RBP14.51□□□□□ -0.09
VPS28-207ENST00000526977 ACTL10Q5JWF8 245 aa14.51□□□□□ -0.09
VPS28-207ENST00000526977 CMTM2Q8TAZ6 248 aa14.51□□□□□ -0.09
VPS28-207ENST00000526977 UBE2E2Q96LR5 201 aa14.51□□□□□ -0.09
VPS28-207ENST00000526977 MLST8Q9BVC4 326 aa14.51□□□□□ -0.09
VPS28-207ENST00000526977 TRAV9-1A0A075B6T8 112 aa14.5□□□□□ -0.09
VPS28-207ENST00000526977 IGHV3-11P01762 117 aa14.5□□□□□ -0.09
VPS28-207ENST00000526977 RELQ04864 619 aaPredicted RBP14.5□□□□□ -0.09
VPS28-207ENST00000526977 GNB4Q9HAV0 340 aa14.5□□□□□ -0.09
VPS28-207ENST00000526977 NF1P21359 2839 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms