RNA–Protein interactions for RNA: ENST00000526821.5

ATPAF1-208, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 3

Gene ATPAF1, Length 1,222 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-208ENST00000526821 ORM2P19652 201 aa4.71□□□□□ -1.66
ATPAF1-208ENST00000526821 GPR183P32249 361 aa4.71□□□□□ -1.66
ATPAF1-208ENST00000526821 RAB9AP51151 201 aa4.71□□□□□ -1.66
ATPAF1-208ENST00000526821 TPPP2P59282 170 aa4.71□□□□□ -1.66
ATPAF1-208ENST00000526821 LYZP61626 148 aa4.71□□□□□ -1.66
ATPAF1-208ENST00000526821 SCGB2A2Q13296 93 aa4.71□□□□□ -1.66
ATPAF1-208ENST00000526821 USF2Q15853 346 aaPredicted RBP4.71□□□□□ -1.66
ATPAF1-208ENST00000526821 FAM90A2PQ658T7 463 aa4.71□□□□□ -1.66
ATPAF1-208ENST00000526821 ZNF343Q6P1L6 599 aa4.71□□□□□ -1.66
ATPAF1-208ENST00000526821 ZNF600Q6ZNG1 722 aa4.71□□□□□ -1.66
ATPAF1-208ENST00000526821 LINC00518Q8N0U6 118 aa4.71□□□□□ -1.66
ATPAF1-208ENST00000526821 CYB561D1Q8N8Q1 229 aa4.71□□□□□ -1.66
ATPAF1-208ENST00000526821 STXBP6Q8NFX7 210 aa4.71□□□□□ -1.66
ATPAF1-208ENST00000526821 OR5AU1Q8NGC0 362 aa4.71□□□□□ -1.66
ATPAF1-208ENST00000526821 OR1B1Q8NGR6 318 aa4.71□□□□□ -1.66
ATPAF1-208ENST00000526821 RXFP4Q8TDU9 374 aa4.71□□□□□ -1.66
ATPAF1-208ENST00000526821 Q8WTZ3 238 aa4.71□□□□□ -1.66
ATPAF1-208ENST00000526821 FXYD5Q96DB9 178 aa4.71□□□□□ -1.66
ATPAF1-208ENST00000526821 NARS2Q96I59 477 aaKnown RBP4.71□□□□□ -1.66
ATPAF1-208ENST00000526821 UHRF2Q96PU4 802 aa4.71□□□□□ -1.66
ATPAF1-208ENST00000526821 TXNDC17Q9BRA2 123 aa4.71□□□□□ -1.66
ATPAF1-208ENST00000526821 SHANK2-AS3Q9BTD1 123 aa4.71□□□□□ -1.66
ATPAF1-208ENST00000526821 SLC25A39Q9BZJ4 359 aaPredicted RBP4.71□□□□□ -1.66
ATPAF1-208ENST00000526821 TMEM167BQ9NRX6 74 aa4.71□□□□□ -1.66
ATPAF1-208ENST00000526821 TMEM14CQ9P0S9 112 aa4.71□□□□□ -1.66
ATPAF1-208ENST00000526821 HIGD1AQ9Y241 93 aa4.71□□□□□ -1.66
ATPAF1-208ENST00000526821 A0A0G2JLM5 398 aa4.7□□□□□ -1.66
ATPAF1-208ENST00000526821 A0A1W2PRE2 83 aa4.7□□□□□ -1.66
ATPAF1-208ENST00000526821 CLPSL1A2RUU4 121 aa4.7□□□□□ -1.66
ATPAF1-208ENST00000526821 F8W036 122 aa4.7□□□□□ -1.66
ATPAF1-208ENST00000526821 MRPS12O15235 138 aaKnown RBP4.7□□□□□ -1.66
ATPAF1-208ENST00000526821 NUPL2O15504 423 aaKnown RBP4.7□□□□□ -1.66
ATPAF1-208ENST00000526821 OR7C2O60412 319 aa4.7□□□□□ -1.66
ATPAF1-208ENST00000526821 APOC3P02656 99 aa4.7□□□□□ -1.66
ATPAF1-208ENST00000526821 IL4P05112 153 aa4.7□□□□□ -1.66
ATPAF1-208ENST00000526821 NPPCP23582 126 aa4.7□□□□□ -1.66
ATPAF1-208ENST00000526821 MYCNOSP40205 109 aa4.7□□□□□ -1.66
ATPAF1-208ENST00000526821 HILS1P60008 231 aa4.7□□□□□ -1.66
ATPAF1-208ENST00000526821 RPL15P61313 204 aaKnown RBP4.7□□□□□ -1.66
ATPAF1-208ENST00000526821 GUCA2BQ16661 112 aa4.7□□□□□ -1.66
ATPAF1-208ENST00000526821 C10orf99Q6UWK7 81 aa4.7□□□□□ -1.66
ATPAF1-208ENST00000526821 TOMM20LQ6UXN7 152 aa4.7□□□□□ -1.66
ATPAF1-208ENST00000526821 CLEC19AQ6UXS0 136 aa4.7□□□□□ -1.66
ATPAF1-208ENST00000526821 Q6ZSV7 163 aa4.7□□□□□ -1.66
ATPAF1-208ENST00000526821 ZNF329Q86UD4 541 aa4.7□□□□□ -1.66
ATPAF1-208ENST00000526821 LINC00469Q8N7U9 141 aa4.7□□□□□ -1.66
ATPAF1-208ENST00000526821 WIPF2Q8TF74 440 aaPredicted RBP4.7□□□□□ -1.66
ATPAF1-208ENST00000526821 DUX5Q96PT3 197 aa4.7□□□□□ -1.66
ATPAF1-208ENST00000526821 PAXXQ9BUH6 204 aa4.7□□□□□ -1.66
ATPAF1-208ENST00000526821 OR51M1Q9H341 326 aa4.7□□□□□ -1.66
ATPAF1-208ENST00000526821 YTHDF2Q9Y5A9 579 aaKnown RBP4.7□□□□□ -1.66
ATPAF1-208ENST00000526821 PUS1Q9Y606 427 aaKnown RBP eCLIP4.7□□□□□ -1.66
ATPAF1-208ENST00000526821 BAHCC1Q9P281 2608 aa4.7□□□□□ -1.66
ATPAF1-208ENST00000526821 ZNF98A6NK75 572 aa4.69□□□□□ -1.66
ATPAF1-208ENST00000526821 GGTLC3B5MD39 225 aa4.69□□□□□ -1.66
ATPAF1-208ENST00000526821 C11orf94C9JXX5 98 aa4.69□□□□□ -1.66
ATPAF1-208ENST00000526821 PPP5D1E7EU14 171 aa4.69□□□□□ -1.66
ATPAF1-208ENST00000526821 PDE6DO43924 150 aa4.69□□□□□ -1.66
ATPAF1-208ENST00000526821 TRBV12-3P01733 135 aa4.69□□□□□ -1.66
ATPAF1-208ENST00000526821 OR10J4P0C629 311 aa4.69□□□□□ -1.66
ATPAF1-208ENST00000526821 IGLC2P0DOY2 106 aa4.69□□□□□ -1.66
ATPAF1-208ENST00000526821 PYYP10082 97 aa4.69□□□□□ -1.66
ATPAF1-208ENST00000526821 CD99P14209 185 aa4.69□□□□□ -1.66
ATPAF1-208ENST00000526821 SRD5A1P18405 259 aa4.69□□□□□ -1.66
ATPAF1-208ENST00000526821 ATP5G3P48201 142 aa4.69□□□□□ -1.66
ATPAF1-208ENST00000526821 UBE2G2P60604 165 aa4.69□□□□□ -1.66
ATPAF1-208ENST00000526821 UBE2L3P68036 154 aaKnown RBP4.69□□□□□ -1.66
ATPAF1-208ENST00000526821 RELQ04864 619 aaPredicted RBP4.69□□□□□ -1.66
ATPAF1-208ENST00000526821 ANXA2RQ3ZCQ2 193 aa4.69□□□□□ -1.66
ATPAF1-208ENST00000526821 SOHLH1Q5JUK2 328 aa4.69□□□□□ -1.66
ATPAF1-208ENST00000526821 FAM209BQ5JX69 171 aa4.69□□□□□ -1.66
ATPAF1-208ENST00000526821 LEMD1Q68G75 181 aa4.69□□□□□ -1.66
ATPAF1-208ENST00000526821 TEX38Q6PEX7 206 aa4.69□□□□□ -1.66
ATPAF1-208ENST00000526821 ATRAIDQ6UW56 229 aa4.69□□□□□ -1.66
ATPAF1-208ENST00000526821 SVBPQ8N300 66 aa4.69□□□□□ -1.66
ATPAF1-208ENST00000526821 GLMPQ8WWB7 406 aa4.69□□□□□ -1.66
ATPAF1-208ENST00000526821 C11orf52Q96A22 123 aa4.69□□□□□ -1.66
ATPAF1-208ENST00000526821 C16orf95Q9H693 158 aa4.69□□□□□ -1.66
ATPAF1-208ENST00000526821 NF1P21359 2839 aa4.69□□□□□ -1.66
ATPAF1-208ENST00000526821 FN1P02751 2386 aaKnown RBP4.68□□□□□ -1.66
ATPAF1-208ENST00000526821 SETXQ7Z333 2677 aaKnown RBP4.68□□□□□ -1.66
ATPAF1-208ENST00000526821 F6UZH7 168 aa4.68□□□□□ -1.66
ATPAF1-208ENST00000526821 H3BQ15 152 aa4.68□□□□□ -1.66
ATPAF1-208ENST00000526821 BMPR1BO00238 502 aa4.68□□□□□ -1.66
ATPAF1-208ENST00000526821 NDUFA4O00483 81 aa4.68□□□□□ -1.66
ATPAF1-208ENST00000526821 PRYO14603 147 aa4.68□□□□□ -1.66
ATPAF1-208ENST00000526821 BUB3O43684 328 aa4.68□□□□□ -1.66
ATPAF1-208ENST00000526821 SCO1O75880 301 aa4.68□□□□□ -1.66
ATPAF1-208ENST00000526821 IGHV3-11P01762 117 aa4.68□□□□□ -1.66
ATPAF1-208ENST00000526821 NBEAP1P0C6P0 100 aa4.68□□□□□ -1.66
ATPAF1-208ENST00000526821 HIST1H1EP10412 219 aaKnown RBP4.68□□□□□ -1.66
ATPAF1-208ENST00000526821 CRYBB3P26998 211 aa4.68□□□□□ -1.66
ATPAF1-208ENST00000526821 ARL3P36405 182 aa4.68□□□□□ -1.66
ATPAF1-208ENST00000526821 SLC35B1P78383 322 aa4.68□□□□□ -1.66
ATPAF1-208ENST00000526821 FLI1Q01543 452 aaPredicted RBP4.68□□□□□ -1.66
ATPAF1-208ENST00000526821 CST9LP1Q5W188 147 aa4.68□□□□□ -1.66
ATPAF1-208ENST00000526821 C9orf47Q6ZRZ4 202 aa4.68□□□□□ -1.66
ATPAF1-208ENST00000526821 S100A7AQ86SG5 101 aa4.68□□□□□ -1.66
ATPAF1-208ENST00000526821 BPIFA4PQ86YQ2 179 aa4.68□□□□□ -1.66
ATPAF1-208ENST00000526821 OR4X2Q8NGF9 303 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms