RNA–Protein interactions for RNA: ENST00000526066.5

CCS-204, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 872 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-204ENST00000526066 DNAH7Q8WXX0 4024 aa12.9□□□□□ -0.34
CCS-204ENST00000526066 A0A087X0K7 114 aa12.9□□□□□ -0.34
CCS-204ENST00000526066 TRAV2A0A0B4J234 112 aa12.9□□□□□ -0.34
CCS-204ENST00000526066 IGLC2P0DOY2 106 aa12.9□□□□□ -0.34
CCS-204ENST00000526066 IGHV4-30-4P0DP06 118 aa12.9□□□□□ -0.34
CCS-204ENST00000526066 MEOX2P50222 304 aa12.9□□□□□ -0.34
CCS-204ENST00000526066 TEX261Q6UWH6 196 aa12.9□□□□□ -0.34
CCS-204ENST00000526066 SPAG8Q99932 426 aaPredicted RBP12.9□□□□□ -0.34
CCS-204ENST00000526066 SPATA25Q9BR10 227 aa12.9□□□□□ -0.34
CCS-204ENST00000526066 OR51M1Q9H341 326 aa12.9□□□□□ -0.34
CCS-204ENST00000526066 IZUMO1RA6ND01 250 aa12.89□□□□□ -0.35
CCS-204ENST00000526066 OR7C2O60412 319 aa12.89□□□□□ -0.35
CCS-204ENST00000526066 ATF4P18848 351 aaPredicted RBP12.89□□□□□ -0.35
CCS-204ENST00000526066 FHITP49789 147 aa12.89□□□□□ -0.35
CCS-204ENST00000526066 RPL11P62913 178 aaKnown RBP12.89□□□□□ -0.35
CCS-204ENST00000526066 PAFAH1B2P68402 229 aa12.89□□□□□ -0.35
CCS-204ENST00000526066 FAM74A1Q5RGS3 127 aa12.89□□□□□ -0.35
CCS-204ENST00000526066 SAMD13Q5VXD3 122 aa12.89□□□□□ -0.35
CCS-204ENST00000526066 SSX7Q7RTT5 188 aa12.89□□□□□ -0.35
CCS-204ENST00000526066 RNF141Q8WVD5 230 aa12.89□□□□□ -0.35
CCS-204ENST00000526066 MBD3L1Q8WWY6 194 aa12.89□□□□□ -0.35
CCS-204ENST00000526066 ZNF503Q96F45 646 aa12.89□□□□□ -0.35
CCS-204ENST00000526066 PAXXQ9BUH6 204 aa12.89□□□□□ -0.35
CCS-204ENST00000526066 HRH4Q9H3N8 390 aa12.89□□□□□ -0.35
CCS-204ENST00000526066 NRN1Q9NPD7 142 aa12.89□□□□□ -0.35
CCS-204ENST00000526066 ZNF785A8K8V0 405 aa12.88□□□□□ -0.35
CCS-204ENST00000526066 CXorf1O96002 111 aa12.88□□□□□ -0.35
CCS-204ENST00000526066 IFNA7P01567 189 aa12.88□□□□□ -0.35
CCS-204ENST00000526066 HIST1H1EP10412 219 aaKnown RBP12.88□□□□□ -0.35
CCS-204ENST00000526066 GUK1Q16774 197 aa12.88□□□□□ -0.35
CCS-204ENST00000526066 ZNF680Q8NEM1 530 aa12.88□□□□□ -0.35
CCS-204ENST00000526066 C17orf77Q96MU5 243 aa12.88□□□□□ -0.35
CCS-204ENST00000526066 MS4A6AQ9H2W1 248 aa12.88□□□□□ -0.35
CCS-204ENST00000526066 EDA2RQ9HAV5 297 aa12.88□□□□□ -0.35
CCS-204ENST00000526066 SELENOKQ9Y6D0 94 aa12.88□□□□□ -0.35
CCS-204ENST00000526066 HUWE1Q7Z6Z7 4374 aaKnown RBP12.87□□□□□ -0.35
CCS-204ENST00000526066 MAP1LC3B2A6NCE7 125 aa12.87□□□□□ -0.35
CCS-204ENST00000526066 OR4C46A6NHA9 309 aa12.87□□□□□ -0.35
CCS-204ENST00000526066 HMGB3O15347 200 aaKnown RBP12.87□□□□□ -0.35
CCS-204ENST00000526066 EIF3GO75821 320 aaKnown RBP eCLIP12.87□□□□□ -0.35
CCS-204ENST00000526066 ARL14EPLP0DKL9 152 aa12.87□□□□□ -0.35
CCS-204ENST00000526066 PYYP10082 97 aa12.87□□□□□ -0.35
CCS-204ENST00000526066 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.87□□□□□ -0.35
CCS-204ENST00000526066 IL17DQ8TAD2 202 aa12.87□□□□□ -0.35
CCS-204ENST00000526066 LRRC20Q8TCA0 184 aa12.87□□□□□ -0.35
CCS-204ENST00000526066 DCANP1Q8TF63 244 aa12.87□□□□□ -0.35
CCS-204ENST00000526066 FXYD5Q96DB9 178 aa12.87□□□□□ -0.35
CCS-204ENST00000526066 MAP1LC3BQ9GZQ8 125 aa12.87□□□□□ -0.35
CCS-204ENST00000526066 LYSTQ99698 3801 aa12.87□□□□□ -0.35
CCS-204ENST00000526066 IGKV3-7A0A075B6H7 116 aa12.86□□□□□ -0.35
CCS-204ENST00000526066 TRAV1-1A0A0B4J248 108 aa12.86□□□□□ -0.35
CCS-204ENST00000526066 H3BQ15 152 aa12.86□□□□□ -0.35
CCS-204ENST00000526066 K7EQG2 157 aa12.86□□□□□ -0.35
CCS-204ENST00000526066 DNASE2O00115 360 aaPredicted RBP12.86□□□□□ -0.35
CCS-204ENST00000526066 ZNF253O75346 499 aa12.86□□□□□ -0.35
CCS-204ENST00000526066 H2AFB1P0C5Y9 115 aa12.86□□□□□ -0.35
CCS-204ENST00000526066 UBE2L3P68036 154 aaKnown RBP12.86□□□□□ -0.35
CCS-204ENST00000526066 PDE6HQ13956 83 aa12.86□□□□□ -0.35
CCS-204ENST00000526066 LCN15Q6UWW0 184 aa12.86□□□□□ -0.35
CCS-204ENST00000526066 SUN5Q8TC36 379 aa12.86□□□□□ -0.35
CCS-204ENST00000526066 SFT2D1Q8WV19 159 aa12.86□□□□□ -0.35
CCS-204ENST00000526066 SAT2Q96F10 170 aaPredicted RBP12.86□□□□□ -0.35
CCS-204ENST00000526066 ZNF586Q9NXT0 402 aa12.86□□□□□ -0.35
CCS-204ENST00000526066 SACSQ9NZJ4 4579 aa12.86□□□□□ -0.35
CCS-204ENST00000526066 ZNF705EA8MWA4 302 aaPredicted RBP12.85□□□□□ -0.35
CCS-204ENST00000526066 A8MZ25 164 aa12.85□□□□□ -0.35
CCS-204ENST00000526066 SOCS3O14543 225 aa12.85□□□□□ -0.35
CCS-204ENST00000526066 OR10J4P0C629 311 aa12.85□□□□□ -0.35
CCS-204ENST00000526066 NBEAP1P0C6P0 100 aa12.85□□□□□ -0.35
CCS-204ENST00000526066 GCHFRP30047 84 aa12.85□□□□□ -0.35
CCS-204ENST00000526066 GUCA2BQ16661 112 aa12.85□□□□□ -0.35
CCS-204ENST00000526066 GTSCR1Q86UQ5 136 aa12.85□□□□□ -0.35
CCS-204ENST00000526066 GBGT1Q8N5D6 347 aa12.85□□□□□ -0.35
CCS-204ENST00000526066 SLC50A1Q9BRV3 221 aa12.85□□□□□ -0.35
CCS-204ENST00000526066 TUBA4BQ9H853 241 aa12.85□□□□□ -0.35
CCS-204ENST00000526066 TMEM167BQ9NRX6 74 aa12.85□□□□□ -0.35
CCS-204ENST00000526066 UBQLN2Q9UHD9 624 aa12.85□□□□□ -0.35
CCS-204ENST00000526066 DNAH1Q9P2D7 4330 aa12.85□□□□□ -0.35
CCS-204ENST00000526066 TRBV19A0A075B6N1 114 aa12.84□□□□□ -0.35
CCS-204ENST00000526066 TEX46H3BTG2 121 aa12.84□□□□□ -0.35
CCS-204ENST00000526066 ISLRO14498 428 aa12.84□□□□□ -0.35
CCS-204ENST00000526066 HBE1P02100 147 aa12.84□□□□□ -0.35
CCS-204ENST00000526066 BLOC1S1P78537 153 aa12.84□□□□□ -0.35
CCS-204ENST00000526066 C19orf73Q9NVV2 129 aa12.84□□□□□ -0.35
CCS-204ENST00000526066 ID1P41134 155 aa12.83□□□□□ -0.36
CCS-204ENST00000526066 PSMB3P49720 205 aa12.83□□□□□ -0.36
CCS-204ENST00000526066 FGF8P55075 233 aaPredicted RBP12.83□□□□□ -0.36
CCS-204ENST00000526066 Q8N1Y9 231 aa12.83□□□□□ -0.36
CCS-204ENST00000526066 ZNF331Q9NQX6 463 aaPredicted RBP12.83□□□□□ -0.36
CCS-204ENST00000526066 CLEC5AQ9NY25 188 aa12.83□□□□□ -0.36
CCS-204ENST00000526066 NDUFB4O95168 129 aa12.82□□□□□ -0.36
CCS-204ENST00000526066 TFPI2P48307 235 aa12.82□□□□□ -0.36
CCS-204ENST00000526066 CMC4P56277 68 aaPredicted RBP12.82□□□□□ -0.36
CCS-204ENST00000526066 IFITM2Q01629 132 aa12.82□□□□□ -0.36
CCS-204ENST00000526066 ZNF767PQ75MW2 155 aa12.82□□□□□ -0.36
CCS-204ENST00000526066 WFDC3Q8IUB2 231 aa12.82□□□□□ -0.36
CCS-204ENST00000526066 LYPD1Q8N2G4 141 aa12.82□□□□□ -0.36
CCS-204ENST00000526066 C16orf92Q96LL3 132 aa12.82□□□□□ -0.36
CCS-204ENST00000526066 FAM110AQ9BQ89 295 aa12.82□□□□□ -0.36
CCS-204ENST00000526066 H3BTX0 84 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms