RNA–Protein interactions for RNA: ENST00000524773.5

CAPN1-202, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-202ENST00000524773 CD5LO43866 347 aa10.44□□□□□ -0.74
CAPN1-202ENST00000524773 GAS8-AS1O95177 125 aa10.44□□□□□ -0.74
CAPN1-202ENST00000524773 COX8AP10176 69 aa10.44□□□□□ -0.74
CAPN1-202ENST00000524773 RPL27AP46776 148 aaKnown RBP10.44□□□□□ -0.74
CAPN1-202ENST00000524773 VMA21Q3ZAQ7 101 aa10.44□□□□□ -0.74
CAPN1-202ENST00000524773 ZNF207O43670 478 aaKnown RBP10.43□□□□□ -0.74
CAPN1-202ENST00000524773 C8orf46Q8TAG6 207 aa10.43□□□□□ -0.74
CAPN1-202ENST00000524773 IGF2-ASQ6U949 168 aa10.43□□□□□ -0.74
CAPN1-202ENST00000524773 VSTM2AQ8TAG5 236 aa10.43□□□□□ -0.74
CAPN1-202ENST00000524773 LINC00574Q9H8X3 128 aa10.43□□□□□ -0.74
CAPN1-202ENST00000524773 IGHV3-35A0A0C4DH35 117 aa10.42□□□□□ -0.74
CAPN1-202ENST00000524773 HAX1O00165 279 aa10.42□□□□□ -0.74
CAPN1-202ENST00000524773 IGHV3-23P01764 117 aa10.42□□□□□ -0.74
CAPN1-202ENST00000524773 PPBPP02775 128 aa10.42□□□□□ -0.74
CAPN1-202ENST00000524773 IGLC1P0CG04 106 aa10.42□□□□□ -0.74
CAPN1-202ENST00000524773 SIGLEC8Q9NYZ4 499 aa10.42□□□□□ -0.74
CAPN1-202ENST00000524773 C1RLQ9NZP8 487 aa10.42□□□□□ -0.74
CAPN1-202ENST00000524773 FBLL1A6NHQ2 334 aaKnown RBP10.42□□□□□ -0.74
CAPN1-202ENST00000524773 C3orf36Q3SXR2 165 aa10.42□□□□□ -0.74
CAPN1-202ENST00000524773 STXBP6Q8NFX7 210 aa10.42□□□□□ -0.74
CAPN1-202ENST00000524773 FGF6P10767 208 aa10.41□□□□□ -0.74
CAPN1-202ENST00000524773 LYZL1Q6UWQ5 148 aa10.41□□□□□ -0.74
CAPN1-202ENST00000524773 IGFL2Q6UWQ7 119 aa10.41□□□□□ -0.74
CAPN1-202ENST00000524773 TMEM75Q8N9X5 138 aa10.41□□□□□ -0.74
CAPN1-202ENST00000524773 ZNF492Q9P255 531 aa10.41□□□□□ -0.74
CAPN1-202ENST00000524773 DKK2Q9UBU2 259 aa10.41□□□□□ -0.74
CAPN1-202ENST00000524773 PEF1Q9UBV8 284 aaKnown RBP10.41□□□□□ -0.74
CAPN1-202ENST00000524773 PPIAL4EA0A075B759 164 aa10.41□□□□□ -0.74
CAPN1-202ENST00000524773 PPIAL4FP0DN26 164 aa10.41□□□□□ -0.74
CAPN1-202ENST00000524773 PLGLAQ15195 96 aa10.41□□□□□ -0.74
CAPN1-202ENST00000524773 ADIPOQQ15848 244 aa10.41□□□□□ -0.74
CAPN1-202ENST00000524773 TEX36Q5VZQ5 186 aa10.41□□□□□ -0.74
CAPN1-202ENST00000524773 C16orf54Q6UWD8 224 aa10.41□□□□□ -0.74
CAPN1-202ENST00000524773 Q8TAT8 98 aa10.41□□□□□ -0.74
CAPN1-202ENST00000524773 TRGV9Q99603 122 aa10.41□□□□□ -0.74
CAPN1-202ENST00000524773 CSTL1Q9H114 145 aa10.41□□□□□ -0.74
CAPN1-202ENST00000524773 MBD3L4A6NDZ8 208 aaPredicted RBP10.41□□□□□ -0.74
CAPN1-202ENST00000524773 MBD3L3A6NE82 208 aaPredicted RBP10.41□□□□□ -0.74
CAPN1-202ENST00000524773 MBD3L5A6NJ08 208 aaPredicted RBP10.41□□□□□ -0.74
CAPN1-202ENST00000524773 NPIPB6E9PJ23 425 aa10.41□□□□□ -0.74
CAPN1-202ENST00000524773 NDUFB3O43676 98 aa10.41□□□□□ -0.74
CAPN1-202ENST00000524773 CRYGCP07315 174 aa10.41□□□□□ -0.74
CAPN1-202ENST00000524773 LOXP28300 417 aaPredicted RBP10.41□□□□□ -0.74
CAPN1-202ENST00000524773 FCGR2BP31994 310 aaPredicted RBP10.41□□□□□ -0.74
CAPN1-202ENST00000524773 KIR3DS1Q14943 382 aa10.41□□□□□ -0.74
CAPN1-202ENST00000524773 MBD3L2Q8NHZ7 208 aaPredicted RBP10.41□□□□□ -0.74
CAPN1-202ENST00000524773 PSG8Q9UQ74 426 aa10.41□□□□□ -0.74
CAPN1-202ENST00000524773 BSPH1Q075Z2 132 aa10.4□□□□□ -0.74
CAPN1-202ENST00000524773 OR10AG1Q8NH19 301 aa10.4□□□□□ -0.74
CAPN1-202ENST00000524773 RASL11BQ9BPW5 248 aa10.4□□□□□ -0.74
CAPN1-202ENST00000524773 MSRB1Q9NZV6 116 aa10.4□□□□□ -0.74
CAPN1-202ENST00000524773 MAP1AP78559 2803 aaPredicted RBP10.4□□□□□ -0.74
CAPN1-202ENST00000524773 IGKV2-40A0A087WW87 121 aaPredicted RBP10.4□□□□□ -0.75
CAPN1-202ENST00000524773 C17orf100A8MU93 164 aa10.4□□□□□ -0.75
CAPN1-202ENST00000524773 K7ERJ3 54 aa10.4□□□□□ -0.75
CAPN1-202ENST00000524773 IGKV1-17P01599 117 aa10.4□□□□□ -0.75
CAPN1-202ENST00000524773 IGKV2D-40P01614 121 aaPredicted RBP10.4□□□□□ -0.75
CAPN1-202ENST00000524773 PPIFP30405 207 aaKnown RBP10.4□□□□□ -0.75
CAPN1-202ENST00000524773 CT83Q5H943 113 aa10.4□□□□□ -0.75
CAPN1-202ENST00000524773 FAM162BQ5T6X4 162 aa10.4□□□□□ -0.75
CAPN1-202ENST00000524773 FER1L6-AS1Q8NA97 138 aa10.4□□□□□ -0.75
CAPN1-202ENST00000524773 AP1S3Q96PC3 154 aa10.4□□□□□ -0.75
CAPN1-202ENST00000524773 OTORQ9NRC9 128 aa10.4□□□□□ -0.75
CAPN1-202ENST00000524773 TMEM186Q96B77 213 aa10.39□□□□□ -0.75
CAPN1-202ENST00000524773 SIGLEC9Q9Y336 463 aa10.39□□□□□ -0.75
CAPN1-202ENST00000524773 COL12A1Q99715 3063 aa10.39□□□□□ -0.75
CAPN1-202ENST00000524773 IL4P05112 153 aa10.39□□□□□ -0.75
CAPN1-202ENST00000524773 HLA-DMBP28068 263 aa10.39□□□□□ -0.75
CAPN1-202ENST00000524773 FAM71F2Q6NXP2 309 aa10.39□□□□□ -0.75
CAPN1-202ENST00000524773 SMIM15Q7Z3B0 74 aa10.39□□□□□ -0.75
CAPN1-202ENST00000524773 COL25A1Q9BXS0 654 aaPredicted RBP10.39□□□□□ -0.75
CAPN1-202ENST00000524773 GFRA4Q9GZZ7 299 aa10.39□□□□□ -0.75
CAPN1-202ENST00000524773 TEX22C9J3V5 150 aa10.38□□□□□ -0.75
CAPN1-202ENST00000524773 TMEM178BH3BS89 294 aa10.38□□□□□ -0.75
CAPN1-202ENST00000524773 IGHV1-8P0DP01 117 aa10.38□□□□□ -0.75
CAPN1-202ENST00000524773 CSN1S1P47710 185 aa10.38□□□□□ -0.75
CAPN1-202ENST00000524773 RIGQ13278 110 aa10.38□□□□□ -0.75
CAPN1-202ENST00000524773 PRELID3AQ96N28 172 aa10.38□□□□□ -0.75
CAPN1-202ENST00000524773 MS4A6AQ9H2W1 248 aa10.38□□□□□ -0.75
CAPN1-202ENST00000524773 CNIH1O95406 144 aa10.38□□□□□ -0.75
CAPN1-202ENST00000524773 NGBQ9NPG2 151 aa10.38□□□□□ -0.75
CAPN1-202ENST00000524773 INSIG2Q9Y5U4 225 aa10.38□□□□□ -0.75
CAPN1-202ENST00000524773 SOX21Q9Y651 276 aaPredicted RBP10.38□□□□□ -0.75
CAPN1-202ENST00000524773 TRBV19A0A075B6N1 114 aa10.38□□□□□ -0.75
CAPN1-202ENST00000524773 A0A0G2JLM5 398 aa10.38□□□□□ -0.75
CAPN1-202ENST00000524773 INS-IGF2F8WCM5 200 aa10.38□□□□□ -0.75
CAPN1-202ENST00000524773 K7ERU9 68 aa10.38□□□□□ -0.75
CAPN1-202ENST00000524773 EVI2AP22794 236 aa10.38□□□□□ -0.75
CAPN1-202ENST00000524773 PPP1R27Q86WC6 154 aa10.38□□□□□ -0.75
CAPN1-202ENST00000524773 SPTA1P02549 2419 aa10.37□□□□□ -0.75
CAPN1-202ENST00000524773 NPYP01303 97 aa10.37□□□□□ -0.75
CAPN1-202ENST00000524773 GATA1P15976 413 aaPredicted RBP10.37□□□□□ -0.75
CAPN1-202ENST00000524773 MEF2CQ06413 473 aaPredicted RBP10.37□□□□□ -0.75
CAPN1-202ENST00000524773 SIGLEC15Q6ZMC9 328 aa10.37□□□□□ -0.75
CAPN1-202ENST00000524773 ASCL5Q7RTU5 278 aa10.37□□□□□ -0.75
CAPN1-202ENST00000524773 OR4A5Q8NH83 315 aa10.37□□□□□ -0.75
CAPN1-202ENST00000524773 IGKV2D-26A0A0A0MRZ7 120 aa10.37□□□□□ -0.75
CAPN1-202ENST00000524773 NPIPB5A8MRT5 1133 aa10.37□□□□□ -0.75
CAPN1-202ENST00000524773 MRPL51Q4U2R6 128 aaKnown RBP10.36□□□□□ -0.75
CAPN1-202ENST00000524773 MTURNQ8N3F0 131 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms