RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 CCL24O00175 119 aa2.16□□□□□ -2.06
CSDE1-208ENST00000524652 TSC22D2O75157 780 aa2.16□□□□□ -2.06
CSDE1-208ENST00000524652 CLN5O75503 358 aa2.16□□□□□ -2.06
CSDE1-208ENST00000524652 MED6O75586 246 aa2.16□□□□□ -2.06
CSDE1-208ENST00000524652 IGKV1-17P01599 117 aa2.16□□□□□ -2.06
CSDE1-208ENST00000524652 HSPB1P04792 205 aaKnown RBP2.16□□□□□ -2.06
CSDE1-208ENST00000524652 GIPP09681 153 aaPredicted RBP2.16□□□□□ -2.06
CSDE1-208ENST00000524652 OR8U8P0C7N1 319 aa2.16□□□□□ -2.06
CSDE1-208ENST00000524652 FOLR2P14207 255 aa2.16□□□□□ -2.06
CSDE1-208ENST00000524652 IGLL1P15814 213 aa2.16□□□□□ -2.06
CSDE1-208ENST00000524652 HIST1H1BP16401 226 aaKnown RBP2.16□□□□□ -2.06
CSDE1-208ENST00000524652 CXCL2P19875 107 aa2.16□□□□□ -2.06
CSDE1-208ENST00000524652 FCGR2BP31994 310 aaPredicted RBP2.16□□□□□ -2.06
CSDE1-208ENST00000524652 SNCAP37840 140 aa2.16□□□□□ -2.06
CSDE1-208ENST00000524652 OPRK1P41145 380 aa2.16□□□□□ -2.06
CSDE1-208ENST00000524652 BCAP31P51572 246 aa2.16□□□□□ -2.06
CSDE1-208ENST00000524652 RND2P52198 227 aa2.16□□□□□ -2.06
CSDE1-208ENST00000524652 SYNJ2BPP57105 145 aa2.16□□□□□ -2.06
CSDE1-208ENST00000524652 TAS2R30P59541 319 aa2.16□□□□□ -2.06
CSDE1-208ENST00000524652 EWSR1Q01844 656 aaKnown RBP eCLIP2.16□□□□□ -2.06
CSDE1-208ENST00000524652 ATP5G2Q06055 141 aa2.16□□□□□ -2.06
CSDE1-208ENST00000524652 KLF5Q13887 457 aaPredicted RBP2.16□□□□□ -2.06
CSDE1-208ENST00000524652 USF2Q15853 346 aaPredicted RBP2.16□□□□□ -2.06
CSDE1-208ENST00000524652 TIGITQ495A1 244 aa2.16□□□□□ -2.06
CSDE1-208ENST00000524652 OR8G2PQ6IF36 304 aa2.16□□□□□ -2.06
CSDE1-208ENST00000524652 ACOT7LQ6ZUV0 252 aa2.16□□□□□ -2.06
CSDE1-208ENST00000524652 SLC16A13Q7RTY0 426 aa2.16□□□□□ -2.06
CSDE1-208ENST00000524652 UBAC2Q8NBM4 344 aa2.16□□□□□ -2.06
CSDE1-208ENST00000524652 NECAP1Q8NC96 275 aa2.16□□□□□ -2.06
CSDE1-208ENST00000524652 OR1N2Q8NGR9 330 aa2.16□□□□□ -2.06
CSDE1-208ENST00000524652 OR4X1Q8NH49 305 aa2.16□□□□□ -2.06
CSDE1-208ENST00000524652 RNASEH2CQ8TDP1 164 aaKnown RBP2.16□□□□□ -2.06
CSDE1-208ENST00000524652 VN1R17PQ8TDU5 208 aa2.16□□□□□ -2.06
CSDE1-208ENST00000524652 EEF1AKMT3Q96AZ1 226 aa2.16□□□□□ -2.06
CSDE1-208ENST00000524652 USMG5Q96IX5 58 aa2.16□□□□□ -2.06
CSDE1-208ENST00000524652 CIB3Q96Q77 187 aaPredicted RBP2.16□□□□□ -2.06
CSDE1-208ENST00000524652 RAB40CQ96S21 281 aa2.16□□□□□ -2.06
CSDE1-208ENST00000524652 ENY2Q9NPA8 101 aa2.16□□□□□ -2.06
CSDE1-208ENST00000524652 C21orf62Q9NYP8 219 aa2.16□□□□□ -2.06
CSDE1-208ENST00000524652 PEF1Q9UBV8 284 aaKnown RBP2.16□□□□□ -2.06
CSDE1-208ENST00000524652 PAIP2BQ9ULR5 123 aaKnown RBP2.16□□□□□ -2.06
CSDE1-208ENST00000524652 STRAPQ9Y3F4 350 aaKnown RBP2.16□□□□□ -2.06
CSDE1-208ENST00000524652 U3KQ87 197 aa2.16□□□□□ -2.06
CSDE1-208ENST00000524652 IGHV3OR16-13A0A075B7E8 117 aa2.15□□□□□ -2.07
CSDE1-208ENST00000524652 TRBV7-1A0A0A6YYK4 115 aa2.15□□□□□ -2.07
CSDE1-208ENST00000524652 IGHV3-74A0A0B4J1X5 117 aa2.15□□□□□ -2.07
CSDE1-208ENST00000524652 IGHV3-66A0A0C4DH42 116 aa2.15□□□□□ -2.07
CSDE1-208ENST00000524652 A0A0G2JLM5 398 aa2.15□□□□□ -2.07
CSDE1-208ENST00000524652 UBE2L5PA0A1B0GUS4 154 aa2.15□□□□□ -2.07
CSDE1-208ENST00000524652 WI2-2373I1.2A0A1W2PRP0 233 aa2.15□□□□□ -2.07
CSDE1-208ENST00000524652 TMEM213A2RRL7 107 aa2.15□□□□□ -2.07
CSDE1-208ENST00000524652 A8MWP6 167 aa2.15□□□□□ -2.07
CSDE1-208ENST00000524652 E5RGE8 158 aa2.15□□□□□ -2.07
CSDE1-208ENST00000524652 L7N2F9 121 aa2.15□□□□□ -2.07
CSDE1-208ENST00000524652 NDUFA4O00483 81 aa2.15□□□□□ -2.07
CSDE1-208ENST00000524652 OVOL1O14753 267 aa2.15□□□□□ -2.07
CSDE1-208ENST00000524652 AGPAT2O15120 278 aa2.15□□□□□ -2.07
CSDE1-208ENST00000524652 ZNF207O43670 478 aaKnown RBP2.15□□□□□ -2.07
CSDE1-208ENST00000524652 GNG7O60262 68 aa2.15□□□□□ -2.07
CSDE1-208ENST00000524652 EIF3GO75821 320 aaKnown RBP eCLIP2.15□□□□□ -2.07
CSDE1-208ENST00000524652 IFNA4P05014 189 aa2.15□□□□□ -2.07
CSDE1-208ENST00000524652 CSN3P07498 182 aa2.15□□□□□ -2.07
CSDE1-208ENST00000524652 LINC00869P0C866 280 aa2.15□□□□□ -2.07
CSDE1-208ENST00000524652 SLC25A4P12235 298 aa2.15□□□□□ -2.07
CSDE1-208ENST00000524652 RPL12P30050 165 aaKnown RBP2.15□□□□□ -2.07
CSDE1-208ENST00000524652 OR10J1P30954 320 aa2.15□□□□□ -2.07
CSDE1-208ENST00000524652 MYCNOSP40205 109 aa2.15□□□□□ -2.07
CSDE1-208ENST00000524652 P2RY1P47900 373 aa2.15□□□□□ -2.07
CSDE1-208ENST00000524652 SULT1A1P50225 295 aa2.15□□□□□ -2.07
CSDE1-208ENST00000524652 CAV2P51636 162 aa2.15□□□□□ -2.07
CSDE1-208ENST00000524652 SUB1P53999 127 aaKnown RBP eCLIP2.15□□□□□ -2.074e-8■■■□□ 15.4
CSDE1-208ENST00000524652 MFAP4P55083 255 aa2.15□□□□□ -2.07
CSDE1-208ENST00000524652 RAB11AP62491 216 aa2.15□□□□□ -2.07
CSDE1-208ENST00000524652 DLK1P80370 383 aa2.15□□□□□ -2.07
CSDE1-208ENST00000524652 SLC38A11Q08AI6 406 aa2.15□□□□□ -2.07
CSDE1-208ENST00000524652 ZNF616Q08AN1 781 aa2.15□□□□□ -2.07
CSDE1-208ENST00000524652 VWC2Q2TAL6 325 aa2.15□□□□□ -2.07
CSDE1-208ENST00000524652 LGALSLQ3ZCW2 172 aaPredicted RBP2.15□□□□□ -2.07
CSDE1-208ENST00000524652 Q56UQ5 140 aa2.15□□□□□ -2.07
CSDE1-208ENST00000524652 GCSAMLQ5JQS6 135 aa2.15□□□□□ -2.07
CSDE1-208ENST00000524652 LAMTOR1Q6IAA8 161 aa2.15□□□□□ -2.07
CSDE1-208ENST00000524652 TOMM20LQ6UXN7 152 aa2.15□□□□□ -2.07
CSDE1-208ENST00000524652 PATE2Q6UY27 113 aa2.15□□□□□ -2.07
CSDE1-208ENST00000524652 SSX7Q7RTT5 188 aa2.15□□□□□ -2.07
CSDE1-208ENST00000524652 GPHB5Q86YW7 130 aa2.15□□□□□ -2.07
CSDE1-208ENST00000524652 TCTE3Q8IZS6 198 aa2.15□□□□□ -2.07
CSDE1-208ENST00000524652 THAP8Q8NA92 274 aa2.15□□□□□ -2.07
CSDE1-208ENST00000524652 WFDC9Q8NEX5 89 aa2.15□□□□□ -2.07
CSDE1-208ENST00000524652 OR10P1Q8NGE3 313 aa2.15□□□□□ -2.07
CSDE1-208ENST00000524652 OR9G4Q8NGQ1 327 aa2.15□□□□□ -2.07
CSDE1-208ENST00000524652 OR1L6Q8NGR2 347 aa2.15□□□□□ -2.07
CSDE1-208ENST00000524652 OR5C1Q8NGR4 320 aa2.15□□□□□ -2.07
CSDE1-208ENST00000524652 OR2T35Q8NGX2 323 aa2.15□□□□□ -2.07
CSDE1-208ENST00000524652 ACY3Q96HD9 319 aa2.15□□□□□ -2.07
CSDE1-208ENST00000524652 CXorf58Q96LI9 332 aa2.15□□□□□ -2.07
CSDE1-208ENST00000524652 AQP10Q96PS8 301 aa2.15□□□□□ -2.07
CSDE1-208ENST00000524652 MGST2Q99735 147 aa2.15□□□□□ -2.07
CSDE1-208ENST00000524652 GGTLC1Q9BX51 225 aa2.15□□□□□ -2.07
CSDE1-208ENST00000524652 SMIM3Q9BZL3 60 aa2.15□□□□□ -2.07
CSDE1-208ENST00000524652 VSIRQ9H7M9 311 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms