RNA–Protein interactions for RNA: ENST00000522963.5

PVT1-215, Transcript of Pvt1 oncogene, humanhuman

TSL 4

Gene PVT1, Length 568 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-215ENST00000522963 IFITM2Q01629 132 aa8.93□□□□□ -0.98
PVT1-215ENST00000522963 GUCA2BQ16661 112 aa8.93□□□□□ -0.98
PVT1-215ENST00000522963 LCN12Q6JVE5 192 aa8.93□□□□□ -0.98
PVT1-215ENST00000522963 PQLC2Q6ZP29 291 aa8.93□□□□□ -0.98
PVT1-215ENST00000522963 WFDC3Q8IUB2 231 aa8.93□□□□□ -0.98
PVT1-215ENST00000522963 STXBP6Q8NFX7 210 aa8.93□□□□□ -0.98
PVT1-215ENST00000522963 RNF141Q8WVD5 230 aa8.93□□□□□ -0.98
PVT1-215ENST00000522963 MBD3L1Q8WWY6 194 aa8.93□□□□□ -0.98
PVT1-215ENST00000522963 FXYD5Q96DB9 178 aa8.93□□□□□ -0.98
PVT1-215ENST00000522963 MAP1LC3BQ9GZQ8 125 aa8.93□□□□□ -0.98
PVT1-215ENST00000522963 NRN1Q9NPD7 142 aa8.93□□□□□ -0.98
PVT1-215ENST00000522963 ZNF586Q9NXT0 402 aa8.93□□□□□ -0.98
PVT1-215ENST00000522963 ZNF705EA8MWA4 302 aaPredicted RBP8.92□□□□□ -0.98
PVT1-215ENST00000522963 CXorf1O96002 111 aa8.92□□□□□ -0.98
PVT1-215ENST00000522963 IFNA7P01567 189 aa8.92□□□□□ -0.98
PVT1-215ENST00000522963 H2AFB1P0C5Y9 115 aa8.92□□□□□ -0.98
PVT1-215ENST00000522963 GCHFRP30047 84 aa8.92□□□□□ -0.98
PVT1-215ENST00000522963 DCANP1Q8TF63 244 aa8.92□□□□□ -0.98
PVT1-215ENST00000522963 SFT2D1Q8WV19 159 aa8.92□□□□□ -0.98
PVT1-215ENST00000522963 SPAG8Q99932 426 aaPredicted RBP8.92□□□□□ -0.98
PVT1-215ENST00000522963 HRH4Q9H3N8 390 aa8.92□□□□□ -0.98
PVT1-215ENST00000522963 TRBV19A0A075B6N1 114 aa8.91□□□□□ -0.98
PVT1-215ENST00000522963 TRAV2A0A0B4J234 112 aa8.91□□□□□ -0.98
PVT1-215ENST00000522963 A0A1B0GV50 99 aa8.91□□□□□ -0.98
PVT1-215ENST00000522963 K7EQG2 157 aa8.91□□□□□ -0.98
PVT1-215ENST00000522963 DNASE2O00115 360 aaPredicted RBP8.91□□□□□ -0.98
PVT1-215ENST00000522963 SLC17A3O00476 420 aa8.91□□□□□ -0.98
PVT1-215ENST00000522963 SOCS3O14543 225 aa8.91□□□□□ -0.98
PVT1-215ENST00000522963 NBEAP1P0C6P0 100 aa8.91□□□□□ -0.98
PVT1-215ENST00000522963 UBE2L3P68036 154 aaKnown RBP8.91□□□□□ -0.98
PVT1-215ENST00000522963 PAFAH1B2P68402 229 aa8.91□□□□□ -0.98
PVT1-215ENST00000522963 IQCF2Q8IXL9 164 aa8.91□□□□□ -0.98
PVT1-215ENST00000522963 FAM24BQ8N5W8 94 aa8.91□□□□□ -0.98
PVT1-215ENST00000522963 BLNKQ8WV28 456 aa8.91□□□□□ -0.98
PVT1-215ENST00000522963 SAT2Q96F10 170 aaPredicted RBP8.91□□□□□ -0.98
PVT1-215ENST00000522963 TMPRSS5Q9H3S3 457 aa8.91□□□□□ -0.98
PVT1-215ENST00000522963 UBQLN2Q9UHD9 624 aa8.91□□□□□ -0.98
PVT1-215ENST00000522963 TRAV8-2A0A0B4J237 113 aa8.9□□□□□ -0.98
PVT1-215ENST00000522963 TRAV1-1A0A0B4J248 108 aa8.9□□□□□ -0.98
PVT1-215ENST00000522963 NDUFB4O95168 129 aa8.9□□□□□ -0.98
PVT1-215ENST00000522963 MEOX2P50222 304 aa8.9□□□□□ -0.98
PVT1-215ENST00000522963 GUK1Q16774 197 aa8.9□□□□□ -0.98
PVT1-215ENST00000522963 IGFL4Q6B9Z1 124 aa8.9□□□□□ -0.98
PVT1-215ENST00000522963 SUN5Q8TC36 379 aa8.9□□□□□ -0.98
PVT1-215ENST00000522963 PCNPQ8WW12 178 aaKnown RBP8.9□□□□□ -0.98
PVT1-215ENST00000522963 ASCL2Q99929 193 aa8.9□□□□□ -0.98
PVT1-215ENST00000522963 OR4C46A6NHA9 309 aa8.89□□□□□ -0.99
PVT1-215ENST00000522963 HLA-DMBP28068 263 aa8.89□□□□□ -0.99
PVT1-215ENST00000522963 BLOC1S1P78537 153 aa8.89□□□□□ -0.99
PVT1-215ENST00000522963 CCL20P78556 96 aa8.89□□□□□ -0.99
PVT1-215ENST00000522963 GTSCR1Q86UQ5 136 aa8.89□□□□□ -0.99
PVT1-215ENST00000522963 C16orf92Q96LL3 132 aa8.89□□□□□ -0.99
PVT1-215ENST00000522963 ZNF331Q9NQX6 463 aaPredicted RBP8.89□□□□□ -0.99
PVT1-215ENST00000522963 TMEM167BQ9NRX6 74 aa8.89□□□□□ -0.99
PVT1-215ENST00000522963 DNAH3Q8TD57 4116 aa8.88□□□□□ -0.99
PVT1-215ENST00000522963 TGP01266 2768 aa8.88□□□□□ -0.99
PVT1-215ENST00000522963 ZNF253O75346 499 aa8.88□□□□□ -0.99
PVT1-215ENST00000522963 HBE1P02100 147 aa8.88□□□□□ -0.99
PVT1-215ENST00000522963 CD7P09564 240 aa8.88□□□□□ -0.99
PVT1-215ENST00000522963 ZNF688P0C7X2 276 aa8.88□□□□□ -0.99
PVT1-215ENST00000522963 CD81P60033 236 aa8.88□□□□□ -0.99
PVT1-215ENST00000522963 PDE6HQ13956 83 aa8.88□□□□□ -0.99
PVT1-215ENST00000522963 ZNF767PQ75MW2 155 aa8.88□□□□□ -0.99
PVT1-215ENST00000522963 LRRC20Q8TCA0 184 aa8.88□□□□□ -0.99
PVT1-215ENST00000522963 C20orf173Q96LM9 149 aa8.88□□□□□ -0.99
PVT1-215ENST00000522963 SLC50A1Q9BRV3 221 aa8.88□□□□□ -0.99
PVT1-215ENST00000522963 ISLRO14498 428 aa8.87□□□□□ -0.99
PVT1-215ENST00000522963 NMBP08949 121 aa8.87□□□□□ -0.99
PVT1-215ENST00000522963 ID1P41134 155 aa8.87□□□□□ -0.99
PVT1-215ENST00000522963 PSMB3P49720 205 aa8.87□□□□□ -0.99
PVT1-215ENST00000522963 RANP62826 216 aaKnown RBP8.87□□□□□ -0.99
PVT1-215ENST00000522963 ODF3L2Q3SX64 289 aa8.87□□□□□ -0.99
PVT1-215ENST00000522963 SAMD13Q5VXD3 122 aa8.87□□□□□ -0.99
PVT1-215ENST00000522963 EXOC3-AS1Q8N2X6 119 aa8.87□□□□□ -0.99
PVT1-215ENST00000522963 RNF182Q8N6D2 247 aa8.87□□□□□ -0.99
PVT1-215ENST00000522963 LYPD6BQ8NI32 183 aa8.87□□□□□ -0.99
PVT1-215ENST00000522963 B9D2Q9BPU9 175 aa8.87□□□□□ -0.99
PVT1-215ENST00000522963 Q9H3A6 140 aa8.87□□□□□ -0.99
PVT1-215ENST00000522963 YTHDF2Q9Y5A9 579 aaKnown RBP8.87□□□□□ -0.99
PVT1-215ENST00000522963 TEX46H3BTG2 121 aa8.86□□□□□ -0.99
PVT1-215ENST00000522963 PRB4P10163 310 aaPredicted RBP8.86□□□□□ -0.99
PVT1-215ENST00000522963 DEFB131AP59861 70 aa8.86□□□□□ -0.99
PVT1-215ENST00000522963 UBE2G2P60604 165 aa8.86□□□□□ -0.99
PVT1-215ENST00000522963 SNRPD3P62318 126 aaKnown RBP8.86□□□□□ -0.99
PVT1-215ENST00000522963 PSG9Q00887 426 aa8.86□□□□□ -0.99
PVT1-215ENST00000522963 PSMG4Q5JS54 123 aa8.86□□□□□ -0.99
PVT1-215ENST00000522963 Q8N1Y9 231 aa8.86□□□□□ -0.99
PVT1-215ENST00000522963 LYPD1Q8N2G4 141 aa8.86□□□□□ -0.99
PVT1-215ENST00000522963 LINC00052Q96N35 136 aa8.86□□□□□ -0.99
PVT1-215ENST00000522963 TUBA4BQ9H853 241 aa8.86□□□□□ -0.99
PVT1-215ENST00000522963 MAP6D1Q9H9H5 199 aa8.86□□□□□ -0.99
PVT1-215ENST00000522963 C19orf73Q9NVV2 129 aa8.86□□□□□ -0.99
PVT1-215ENST00000522963 PRKDCP78527 4128 aaKnown RBP8.86□□□□□ -0.99
PVT1-215ENST00000522963 A0A1W2PRE2 83 aa8.85□□□□□ -0.99
PVT1-215ENST00000522963 PGPA6NDG6 321 aa8.85□□□□□ -0.99
PVT1-215ENST00000522963 FAM74A7A6NL05 159 aa8.85□□□□□ -0.99
PVT1-215ENST00000522963 M0R3E3 92 aa8.85□□□□□ -0.99
PVT1-215ENST00000522963 FRMD6-AS1P0C7T7 363 aa8.85□□□□□ -0.99
PVT1-215ENST00000522963 IGHV4-30-4P0DP06 118 aa8.85□□□□□ -0.99
PVT1-215ENST00000522963 DEFB1P60022 68 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms