RNA–Protein interactions for RNA: ENST00000522792.1

CTNNA1-236, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 2,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-236ENST00000522792 U3KQE9 123 aa11.82□□□□□ -0.52
CTNNA1-236ENST00000522792 DNASE2O00115 360 aaPredicted RBP11.81□□□□□ -0.52
CTNNA1-236ENST00000522792 PNRC1Q12796 327 aaPredicted RBP11.81□□□□□ -0.52
CTNNA1-236ENST00000522792 RHEBQ15382 184 aa11.81□□□□□ -0.52
CTNNA1-236ENST00000522792 DEFB136Q30KP8 78 aa11.81□□□□□ -0.52
CTNNA1-236ENST00000522792 TM4SF20Q53R12 229 aa11.81□□□□□ -0.52
CTNNA1-236ENST00000522792 SIGLEC15Q6ZMC9 328 aa11.81□□□□□ -0.52
CTNNA1-236ENST00000522792 LINC01006Q8NI28 216 aa11.81□□□□□ -0.52
CTNNA1-236ENST00000522792 EPDR1Q9UM22 224 aa11.81□□□□□ -0.52
CTNNA1-236ENST00000522792 HELTA6NFD8 242 aa11.81□□□□□ -0.52
CTNNA1-236ENST00000522792 ZNF785A8K8V0 405 aa11.81□□□□□ -0.52
CTNNA1-236ENST00000522792 CYSRT1A8MQ03 144 aa11.81□□□□□ -0.52
CTNNA1-236ENST00000522792 EDN2P20800 178 aa11.81□□□□□ -0.52
CTNNA1-236ENST00000522792 FAM106AQ4KMX7 169 aa11.81□□□□□ -0.52
CTNNA1-236ENST00000522792 C16orf95Q9H693 158 aa11.81□□□□□ -0.52
CTNNA1-236ENST00000522792 TRAV34A0A0B4J273 112 aa11.8□□□□□ -0.52
CTNNA1-236ENST00000522792 CENPWQ5EE01 88 aa11.8□□□□□ -0.52
CTNNA1-236ENST00000522792 C1orf194Q5T5A4 169 aa11.8□□□□□ -0.52
CTNNA1-236ENST00000522792 C5orf17Q8NAS9 161 aa11.8□□□□□ -0.52
CTNNA1-236ENST00000522792 SELENOKQ9Y6D0 94 aa11.8□□□□□ -0.52
CTNNA1-236ENST00000522792 GALR1P47211 349 aa11.79□□□□□ -0.52
CTNNA1-236ENST00000522792 IGFL4Q6B9Z1 124 aa11.79□□□□□ -0.52
CTNNA1-236ENST00000522792 C16orf54Q6UWD8 224 aa11.79□□□□□ -0.52
CTNNA1-236ENST00000522792 GPHB5Q86YW7 130 aa11.79□□□□□ -0.52
CTNNA1-236ENST00000522792 CMTM2Q8TAZ6 248 aa11.79□□□□□ -0.52
CTNNA1-236ENST00000522792 SGK494Q96LW2 274 aa11.79□□□□□ -0.52
CTNNA1-236ENST00000522792 BAHCC1Q9P281 2608 aa11.79□□□□□ -0.52
CTNNA1-236ENST00000522792 TCF21O43680 179 aa11.79□□□□□ -0.52
CTNNA1-236ENST00000522792 CDX1P47902 265 aaPredicted RBP11.79□□□□□ -0.52
CTNNA1-236ENST00000522792 CNN1P51911 297 aaKnown RBP11.79□□□□□ -0.52
CTNNA1-236ENST00000522792 PDE6HQ13956 83 aa11.79□□□□□ -0.52
CTNNA1-236ENST00000522792 LINC01551Q86U37 167 aa11.79□□□□□ -0.52
CTNNA1-236ENST00000522792 WIPF2Q8TF74 440 aaPredicted RBP11.79□□□□□ -0.52
CTNNA1-236ENST00000522792 HIST1H2BAQ96A08 127 aa11.79□□□□□ -0.52
CTNNA1-236ENST00000522792 GPR82Q96P67 336 aa11.79□□□□□ -0.52
CTNNA1-236ENST00000522792 DUX3Q96PT4 197 aa11.79□□□□□ -0.52
CTNNA1-236ENST00000522792 DAZ1Q9NQZ3 744 aaKnown RBP11.79□□□□□ -0.52
CTNNA1-236ENST00000522792 IGHV7-4-1A0A0J9YVY3 117 aa11.78□□□□□ -0.52
CTNNA1-236ENST00000522792 M0R3E3 92 aa11.78□□□□□ -0.52
CTNNA1-236ENST00000522792 CRLF1O75462 422 aa11.78□□□□□ -0.52
CTNNA1-236ENST00000522792 TCRAP04437 139 aa11.78□□□□□ -0.52
CTNNA1-236ENST00000522792 CD28P10747 220 aa11.78□□□□□ -0.52
CTNNA1-236ENST00000522792 HOXD3P31249 432 aaPredicted RBP11.78□□□□□ -0.52
CTNNA1-236ENST00000522792 GNG4P50150 75 aa11.78□□□□□ -0.52
CTNNA1-236ENST00000522792 SYNJ2BPP57105 145 aa11.78□□□□□ -0.52
CTNNA1-236ENST00000522792 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.78□□□□□ -0.52
CTNNA1-236ENST00000522792 KLHL30-AS1Q8NEE0 82 aa11.78□□□□□ -0.52
CTNNA1-236ENST00000522792 OCC1Q8TAD7 63 aa11.78□□□□□ -0.52
CTNNA1-236ENST00000522792 GLMPQ8WWB7 406 aa11.78□□□□□ -0.52
CTNNA1-236ENST00000522792 TCEAL7Q9BRU2 100 aa11.78□□□□□ -0.52
CTNNA1-236ENST00000522792 ATG101Q9BSB4 218 aa11.78□□□□□ -0.52
CTNNA1-236ENST00000522792 AAMDCQ9H7C9 122 aa11.78□□□□□ -0.52
CTNNA1-236ENST00000522792 NF1P21359 2839 aa11.78□□□□□ -0.52
CTNNA1-236ENST00000522792 ISLRO14498 428 aa11.77□□□□□ -0.52
CTNNA1-236ENST00000522792 HLA-DMBP28068 263 aa11.77□□□□□ -0.52
CTNNA1-236ENST00000522792 LYPD1Q8N2G4 141 aa11.77□□□□□ -0.52
CTNNA1-236ENST00000522792 C4orf3Q8WVX3 66 aa11.77□□□□□ -0.52
CTNNA1-236ENST00000522792 A0A087X0K7 114 aa11.77□□□□□ -0.53
CTNNA1-236ENST00000522792 A0A1W2PRX2 142 aa11.77□□□□□ -0.53
CTNNA1-236ENST00000522792 C9JCJ5 164 aa11.77□□□□□ -0.53
CTNNA1-236ENST00000522792 SLURP1P55000 103 aa11.77□□□□□ -0.53
CTNNA1-236ENST00000522792 PSG9Q00887 426 aa11.77□□□□□ -0.53
CTNNA1-236ENST00000522792 RNF212Q495C1 297 aa11.77□□□□□ -0.53
CTNNA1-236ENST00000522792 GOLT1AQ6ZVE7 132 aa11.77□□□□□ -0.53
CTNNA1-236ENST00000522792 NHLRC2Q8NBF2 726 aa11.77□□□□□ -0.53
CTNNA1-236ENST00000522792 GRAMD2BQ96HH9 432 aa11.77□□□□□ -0.53
CTNNA1-236ENST00000522792 IGF2BP2-AS1Q96M15 143 aa11.77□□□□□ -0.53
CTNNA1-236ENST00000522792 RHPN1-AS1Q9BWJ2 59 aa11.77□□□□□ -0.53
CTNNA1-236ENST00000522792 UFC1Q9Y3C8 167 aa11.77□□□□□ -0.53
CTNNA1-236ENST00000522792 B4DEV8 164 aa11.76□□□□□ -0.53
CTNNA1-236ENST00000522792 NDUFA7O95182 113 aa11.76□□□□□ -0.53
CTNNA1-236ENST00000522792 UBE2G1P62253 170 aa11.76□□□□□ -0.53
CTNNA1-236ENST00000522792 OR11H1Q8NG94 326 aa11.76□□□□□ -0.53
CTNNA1-236ENST00000522792 ISOC2Q96AB3 205 aa11.76□□□□□ -0.53
CTNNA1-236ENST00000522792 SMCO4Q9NRQ5 59 aa11.76□□□□□ -0.53
CTNNA1-236ENST00000522792 A0A1W2PS18 150 aa11.76□□□□□ -0.53
CTNNA1-236ENST00000522792 K7EMT4 169 aa11.76□□□□□ -0.53
CTNNA1-236ENST00000522792 K7EN84 100 aa11.76□□□□□ -0.53
CTNNA1-236ENST00000522792 CHEK1O14757 476 aa11.76□□□□□ -0.53
CTNNA1-236ENST00000522792 C8orf86Q6ZUL3 223 aa11.76□□□□□ -0.53
CTNNA1-236ENST00000522792 ZNF331Q9NQX6 463 aaPredicted RBP11.76□□□□□ -0.53
CTNNA1-236ENST00000522792 SMPXQ9UHP9 88 aa11.76□□□□□ -0.53
CTNNA1-236ENST00000522792 RNF114Q9Y508 228 aa11.76□□□□□ -0.53
CTNNA1-236ENST00000522792 NSD1Q96L73 2696 aaPredicted RBP11.76□□□□□ -0.53
CTNNA1-236ENST00000522792 FN1P02751 2386 aaKnown RBP11.75□□□□□ -0.53
CTNNA1-236ENST00000522792 TRAV8-1A0A0A6YYK1 113 aa11.75□□□□□ -0.53
CTNNA1-236ENST00000522792 TMEM213A2RRL7 107 aa11.75□□□□□ -0.53
CTNNA1-236ENST00000522792 TAS2R60P59551 318 aa11.75□□□□□ -0.53
CTNNA1-236ENST00000522792 TMEM183BQ1AE95 376 aa11.75□□□□□ -0.53
CTNNA1-236ENST00000522792 RNF182Q8N6D2 247 aa11.75□□□□□ -0.53
CTNNA1-236ENST00000522792 IGKV3-7A0A075B6H7 116 aa11.74□□□□□ -0.53
CTNNA1-236ENST00000522792 A0A087WWC5 75 aa11.74□□□□□ -0.53
CTNNA1-236ENST00000522792 LINC01619G3V211 115 aa11.74□□□□□ -0.53
CTNNA1-236ENST00000522792 RPL11P62913 178 aaKnown RBP11.74□□□□□ -0.53
CTNNA1-236ENST00000522792 OR5I1Q13606 314 aa11.74□□□□□ -0.53
CTNNA1-236ENST00000522792 REC114Q7Z4M0 266 aa11.74□□□□□ -0.53
CTNNA1-236ENST00000522792 OR1N2Q8NGR9 330 aa11.74□□□□□ -0.53
CTNNA1-236ENST00000522792 DPF1Q92782 380 aa11.74□□□□□ -0.53
CTNNA1-236ENST00000522792 CITED2Q99967 270 aaPredicted RBP11.74□□□□□ -0.53
CTNNA1-236ENST00000522792 DIRC3C9JPN6 131 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms