RNA–Protein interactions for RNA: ENST00000522504.5

TRAPPC9-213, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 665 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-213ENST00000522504 NAP1L6A6NFF2 107 aa10.58□□□□□ -0.72
TRAPPC9-213ENST00000522504 H3BP45 60 aa10.58□□□□□ -0.72
TRAPPC9-213ENST00000522504 RHOBP62745 196 aa10.58□□□□□ -0.72
TRAPPC9-213ENST00000522504 ACOT7LQ6ZUV0 252 aa10.58□□□□□ -0.72
TRAPPC9-213ENST00000522504 TMED4Q7Z7H5 227 aa10.58□□□□□ -0.72
TRAPPC9-213ENST00000522504 RNASE8Q8TDE3 154 aaKnown RBP10.58□□□□□ -0.72
TRAPPC9-213ENST00000522504 DEDD2Q8WXF8 326 aa10.58□□□□□ -0.72
TRAPPC9-213ENST00000522504 TIMM8BQ9Y5J9 83 aaPredicted RBP10.58□□□□□ -0.72
TRAPPC9-213ENST00000522504 TRAV26-1A0A087WT03 109 aa10.57□□□□□ -0.72
TRAPPC9-213ENST00000522504 DUXBA0A1W2PPF3 345 aa10.57□□□□□ -0.72
TRAPPC9-213ENST00000522504 PLA2G10O15496 165 aa10.57□□□□□ -0.72
TRAPPC9-213ENST00000522504 LYRM1O43325 122 aa10.57□□□□□ -0.72
TRAPPC9-213ENST00000522504 SYNGR2O43760 224 aa10.57□□□□□ -0.72
TRAPPC9-213ENST00000522504 SLC25A6P12236 298 aa10.57□□□□□ -0.72
TRAPPC9-213ENST00000522504 HOXA5P20719 270 aa10.57□□□□□ -0.72
TRAPPC9-213ENST00000522504 AKR1C1Q04828 323 aa10.57□□□□□ -0.72
TRAPPC9-213ENST00000522504 ASAH1Q13510 395 aa10.57□□□□□ -0.72
TRAPPC9-213ENST00000522504 ESRGQ1W209 222 aa10.57□□□□□ -0.72
TRAPPC9-213ENST00000522504 SPANXN5Q5MJ07 72 aa10.57□□□□□ -0.72
TRAPPC9-213ENST00000522504 TMEM256Q8N2U0 113 aa10.57□□□□□ -0.72
TRAPPC9-213ENST00000522504 LRTM2Q8N967 370 aa10.57□□□□□ -0.72
TRAPPC9-213ENST00000522504 C16orf74Q96GX8 76 aa10.57□□□□□ -0.72
TRAPPC9-213ENST00000522504 Q9H3A6 140 aa10.57□□□□□ -0.72
TRAPPC9-213ENST00000522504 DMBT1Q9UGM3 2413 aaPredicted RBP10.56□□□□□ -0.72
TRAPPC9-213ENST00000522504 A0A0J9YY99 117 aa10.56□□□□□ -0.72
TRAPPC9-213ENST00000522504 DEFA1P59665 94 aa10.56□□□□□ -0.72
TRAPPC9-213ENST00000522504 DEFA3P59666 94 aa10.56□□□□□ -0.72
TRAPPC9-213ENST00000522504 DLK1P80370 383 aa10.56□□□□□ -0.72
TRAPPC9-213ENST00000522504 OR5I1Q13606 314 aa10.56□□□□□ -0.72
TRAPPC9-213ENST00000522504 PSG3Q16557 428 aa10.56□□□□□ -0.72
TRAPPC9-213ENST00000522504 TMEM128Q5BJH2 165 aa10.56□□□□□ -0.72
TRAPPC9-213ENST00000522504 CYP2G1PQ6ZSU1 146 aa10.56□□□□□ -0.72
TRAPPC9-213ENST00000522504 TMEM144Q7Z5S9 345 aa10.56□□□□□ -0.72
TRAPPC9-213ENST00000522504 LINC00612Q8N6U2 182 aa10.56□□□□□ -0.72
TRAPPC9-213ENST00000522504 CIB3Q96Q77 187 aaPredicted RBP10.56□□□□□ -0.72
TRAPPC9-213ENST00000522504 PARD6GQ9BYG4 376 aaPredicted RBP10.56□□□□□ -0.72
TRAPPC9-213ENST00000522504 HIGD1AQ9Y241 93 aa10.56□□□□□ -0.72
TRAPPC9-213ENST00000522504 A0A087X0K7 114 aa10.55□□□□□ -0.72
TRAPPC9-213ENST00000522504 MRPS12O15235 138 aaKnown RBP10.55□□□□□ -0.72
TRAPPC9-213ENST00000522504 MED6O75586 246 aa10.55□□□□□ -0.72
TRAPPC9-213ENST00000522504 SNRPCP09234 159 aaKnown RBP10.55□□□□□ -0.72
TRAPPC9-213ENST00000522504 RPL7P18124 248 aaKnown RBP10.55□□□□□ -0.72
TRAPPC9-213ENST00000522504 VAMP1P23763 118 aa10.55□□□□□ -0.72
TRAPPC9-213ENST00000522504 RPP30P78346 268 aaKnown RBP10.55□□□□□ -0.72
TRAPPC9-213ENST00000522504 MZT2BQ6NZ67 158 aa10.55□□□□□ -0.72
TRAPPC9-213ENST00000522504 PATE2Q6UY27 113 aa10.55□□□□□ -0.72
TRAPPC9-213ENST00000522504 RXFP4Q8TDU9 374 aa10.55□□□□□ -0.72
TRAPPC9-213ENST00000522504 TMEM263Q8WUH6 116 aaKnown RBP10.55□□□□□ -0.72
TRAPPC9-213ENST00000522504 GNPNAT1Q96EK6 184 aaPredicted RBP10.55□□□□□ -0.72
TRAPPC9-213ENST00000522504 SMCO3A2RU48 225 aa10.54□□□□□ -0.72
TRAPPC9-213ENST00000522504 HYPMO75409 117 aa10.54□□□□□ -0.72
TRAPPC9-213ENST00000522504 IL5P05113 134 aa10.54□□□□□ -0.72
TRAPPC9-213ENST00000522504 HOXB5P09067 269 aa10.54□□□□□ -0.72
TRAPPC9-213ENST00000522504 LINC00869P0C866 280 aa10.54□□□□□ -0.72
TRAPPC9-213ENST00000522504 BTF3P20290 206 aaKnown RBP10.54□□□□□ -0.72
TRAPPC9-213ENST00000522504 M6PRP20645 277 aa10.54□□□□□ -0.72
TRAPPC9-213ENST00000522504 BTCP35070 178 aa10.54□□□□□ -0.72
TRAPPC9-213ENST00000522504 FUSP35637 526 aaKnown RBP eCLIP10.54□□□□□ -0.72
TRAPPC9-213ENST00000522504 CDKN1BP46527 198 aa10.54□□□□□ -0.72
TRAPPC9-213ENST00000522504 PLP1P60201 277 aa10.54□□□□□ -0.72
TRAPPC9-213ENST00000522504 PPP1R1AQ13522 171 aa10.54□□□□□ -0.72
TRAPPC9-213ENST00000522504 ZNF493Q6ZR52 646 aa10.54□□□□□ -0.72
TRAPPC9-213ENST00000522504 RPUSD4Q96CM3 377 aaKnown RBP10.54□□□□□ -0.72
TRAPPC9-213ENST00000522504 UPK3BQ9BT76 320 aa10.54□□□□□ -0.72
TRAPPC9-213ENST00000522504 PPP1R14DQ9NXH3 145 aa10.54□□□□□ -0.72
TRAPPC9-213ENST00000522504 PMS2P5A8MQ11 134 aa10.53□□□□□ -0.72
TRAPPC9-213ENST00000522504 PRAC2D3DTV9 90 aa10.53□□□□□ -0.72
TRAPPC9-213ENST00000522504 CCNKO75909 580 aa10.53□□□□□ -0.72
TRAPPC9-213ENST00000522504 SFT2D2O95562 160 aa10.53□□□□□ -0.72
TRAPPC9-213ENST00000522504 OR5G3P0C626 314 aa10.53□□□□□ -0.72
TRAPPC9-213ENST00000522504 RAP2BP61225 183 aa10.53□□□□□ -0.72
TRAPPC9-213ENST00000522504 TTC32Q5I0X7 151 aa10.53□□□□□ -0.72
TRAPPC9-213ENST00000522504 ENKURQ8TC29 256 aa10.53□□□□□ -0.72
TRAPPC9-213ENST00000522504 ZNF503Q96F45 646 aa10.53□□□□□ -0.72
TRAPPC9-213ENST00000522504 ZNF586Q9NXT0 402 aa10.53□□□□□ -0.72
TRAPPC9-213ENST00000522504 STRAPQ9Y3F4 350 aaKnown RBP10.53□□□□□ -0.72
TRAPPC9-213ENST00000522504 FAM240BA0A1B0GVZ2 78 aa10.52□□□□□ -0.73
TRAPPC9-213ENST00000522504 GAGE12BA1L429 117 aa10.52□□□□□ -0.73
TRAPPC9-213ENST00000522504 H7BYZ3 331 aa10.52□□□□□ -0.73
TRAPPC9-213ENST00000522504 GAGE7O76087 117 aa10.52□□□□□ -0.73
TRAPPC9-213ENST00000522504 GAGE12FP0CL80 117 aa10.52□□□□□ -0.73
TRAPPC9-213ENST00000522504 GAGE12GP0CL81 117 aa10.52□□□□□ -0.73
TRAPPC9-213ENST00000522504 GAGE12IP0CL82 117 aa10.52□□□□□ -0.73
TRAPPC9-213ENST00000522504 S100A7P31151 101 aa10.52□□□□□ -0.73
TRAPPC9-213ENST00000522504 POLR2GP62487 172 aaKnown RBP eCLIP10.52□□□□□ -0.73
TRAPPC9-213ENST00000522504 GFI1BQ5VTD9 330 aa10.52□□□□□ -0.73
TRAPPC9-213ENST00000522504 Q6ZRN7 208 aaPredicted RBP10.52□□□□□ -0.73
TRAPPC9-213ENST00000522504 OR10J6PQ8NGY7 276 aa10.52□□□□□ -0.73
TRAPPC9-213ENST00000522504 MRPS16Q9Y3D3 137 aaKnown RBP10.52□□□□□ -0.73
TRAPPC9-213ENST00000522504 SRRM2Q9UQ35 2752 aaKnown RBP10.52□□□□□ -0.73
TRAPPC9-213ENST00000522504 PIGBOS1A0A0B4J2F0 54 aa10.51□□□□□ -0.73
TRAPPC9-213ENST00000522504 ADAP1O75689 374 aa10.51□□□□□ -0.73
TRAPPC9-213ENST00000522504 RRAS2P62070 204 aaPredicted RBP10.51□□□□□ -0.73
TRAPPC9-213ENST00000522504 ID3Q02535 119 aa10.51□□□□□ -0.73
TRAPPC9-213ENST00000522504 ZBTB8BQ8NAP8 495 aaPredicted RBP10.51□□□□□ -0.73
TRAPPC9-213ENST00000522504 LRRC20Q8TCA0 184 aa10.51□□□□□ -0.73
TRAPPC9-213ENST00000522504 SLC25A21Q9BQT8 299 aaPredicted RBP10.51□□□□□ -0.73
TRAPPC9-213ENST00000522504 ARL6Q9H0F7 186 aa10.51□□□□□ -0.73
TRAPPC9-213ENST00000522504 ZNF331Q9NQX6 463 aaPredicted RBP10.51□□□□□ -0.73
TRAPPC9-213ENST00000522504 A0A1W2PPQ1 181 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms