RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 FAM74A7A6NL05 159 aa16.2■□□□□ 0.18
R3HCC1-208ENST00000522012 CSN3P07498 182 aa16.2■□□□□ 0.18
R3HCC1-208ENST00000522012 RANP62826 216 aaKnown RBP16.2■□□□□ 0.18
R3HCC1-208ENST00000522012 ATRQ13535 2644 aa16.2■□□□□ 0.18
R3HCC1-208ENST00000522012 ZNF506Q5JVG8 444 aa16.2■□□□□ 0.18
R3HCC1-208ENST00000522012 ADAMTSL5Q6ZMM2 481 aa16.2■□□□□ 0.18
R3HCC1-208ENST00000522012 HELTA6NFD8 242 aa16.19■□□□□ 0.18
R3HCC1-208ENST00000522012 TAGLN2P37802 199 aaKnown RBP16.19■□□□□ 0.18
R3HCC1-208ENST00000522012 ICAM4Q14773 271 aa16.19■□□□□ 0.18
R3HCC1-208ENST00000522012 PEA15Q15121 130 aa16.19■□□□□ 0.18
R3HCC1-208ENST00000522012 TCF24Q7RTU0 167 aa16.19■□□□□ 0.18
R3HCC1-208ENST00000522012 CITED4Q96RK1 184 aa16.19■□□□□ 0.18
R3HCC1-208ENST00000522012 TREM1Q9NP99 234 aa16.19■□□□□ 0.18
R3HCC1-208ENST00000522012 MLXQ9UH92 298 aa16.19■□□□□ 0.18
R3HCC1-208ENST00000522012 IGKV3-7A0A075B6H7 116 aa16.18■□□□□ 0.18
R3HCC1-208ENST00000522012 A0A087X0K7 114 aa16.18■□□□□ 0.18
R3HCC1-208ENST00000522012 A0A1W2PRE2 83 aa16.18■□□□□ 0.18
R3HCC1-208ENST00000522012 C11orf94C9JXX5 98 aa16.18■□□□□ 0.18
R3HCC1-208ENST00000522012 ATP5G3P48201 142 aa16.18■□□□□ 0.18
R3HCC1-208ENST00000522012 DYNLRB2Q8TF09 96 aa16.18■□□□□ 0.18
R3HCC1-208ENST00000522012 SLC17A3O00476 420 aa16.17■□□□□ 0.18
R3HCC1-208ENST00000522012 NDUFB4O95168 129 aa16.17■□□□□ 0.18
R3HCC1-208ENST00000522012 SUMO1P63165 101 aaKnown RBP16.17■□□□□ 0.18
R3HCC1-208ENST00000522012 MEF2BQ02080 365 aaPredicted RBP16.17■□□□□ 0.18
R3HCC1-208ENST00000522012 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.17■□□□□ 0.18
R3HCC1-208ENST00000522012 ARL2-SNX15V9GYD0 113 aa16.17■□□□□ 0.18
R3HCC1-208ENST00000522012 CD5P06127 495 aa16.16■□□□□ 0.18
R3HCC1-208ENST00000522012 UQCC3Q6UW78 93 aa16.16■□□□□ 0.18
R3HCC1-208ENST00000522012 SHISA2Q6UWI4 295 aa16.16■□□□□ 0.18
R3HCC1-208ENST00000522012 EIF4E3Q8N5X7 224 aaKnown RBP16.16■□□□□ 0.18
R3HCC1-208ENST00000522012 LINC00482Q8N8I6 264 aa16.16■□□□□ 0.18
R3HCC1-208ENST00000522012 Q9H3A6 140 aa16.16■□□□□ 0.18
R3HCC1-208ENST00000522012 PGPA6NDG6 321 aa16.15■□□□□ 0.18
R3HCC1-208ENST00000522012 GGTLC3B5MD39 225 aa16.15■□□□□ 0.18
R3HCC1-208ENST00000522012 C9JQL5 133 aa16.15■□□□□ 0.18
R3HCC1-208ENST00000522012 MEOX2P50222 304 aa16.15■□□□□ 0.18
R3HCC1-208ENST00000522012 CD81P60033 236 aa16.15■□□□□ 0.18
R3HCC1-208ENST00000522012 PDE6HQ13956 83 aa16.15■□□□□ 0.18
R3HCC1-208ENST00000522012 FAM90A2PQ658T7 463 aa16.15■□□□□ 0.18
R3HCC1-208ENST00000522012 EXOC3-AS1Q8N2X6 119 aa16.15■□□□□ 0.18
R3HCC1-208ENST00000522012 PSG9Q00887 426 aa16.14■□□□□ 0.18
R3HCC1-208ENST00000522012 GBGT1Q8N5D6 347 aa16.14■□□□□ 0.18
R3HCC1-208ENST00000522012 NKX6-2Q9C056 277 aaPredicted RBP16.14■□□□□ 0.18
R3HCC1-208ENST00000522012 NRN1Q9NPD7 142 aa16.14■□□□□ 0.18
R3HCC1-208ENST00000522012 OTORQ9NRC9 128 aa16.14■□□□□ 0.18
R3HCC1-208ENST00000522012 LYPD1Q8N2G4 141 aa16.14■□□□□ 0.17
R3HCC1-208ENST00000522012 TXNDC17Q9BRA2 123 aa16.14■□□□□ 0.17
R3HCC1-208ENST00000522012 SMDT1Q9H4I9 107 aa16.14■□□□□ 0.17
R3HCC1-208ENST00000522012 AAMDCQ9H7C9 122 aa16.14■□□□□ 0.17
R3HCC1-208ENST00000522012 STAB1Q9NY15 2570 aa16.13■□□□□ 0.17
R3HCC1-208ENST00000522012 ZNF253O75346 499 aa16.13■□□□□ 0.17
R3HCC1-208ENST00000522012 SAP30O75446 220 aa16.13■□□□□ 0.17
R3HCC1-208ENST00000522012 CEBPGP53567 150 aa16.13■□□□□ 0.17
R3HCC1-208ENST00000522012 DEFB114Q30KQ6 69 aa16.13■□□□□ 0.17
R3HCC1-208ENST00000522012 IGFL4Q6B9Z1 124 aa16.13■□□□□ 0.17
R3HCC1-208ENST00000522012 WFDC3Q8IUB2 231 aa16.13■□□□□ 0.17
R3HCC1-208ENST00000522012 C16orf92Q96LL3 132 aa16.13■□□□□ 0.17
R3HCC1-208ENST00000522012 ZNF331Q9NQX6 463 aaPredicted RBP16.13■□□□□ 0.17
R3HCC1-208ENST00000522012 SIGLEC8Q9NYZ4 499 aa16.13■□□□□ 0.17
R3HCC1-208ENST00000522012 PDE6DO43924 150 aa16.12■□□□□ 0.17
R3HCC1-208ENST00000522012 SLC25A5P05141 298 aaKnown RBP16.12■□□□□ 0.17
R3HCC1-208ENST00000522012 SRP19P09132 144 aaKnown RBP16.12■□□□□ 0.17
R3HCC1-208ENST00000522012 RBPMS2Q6ZRY4 209 aaKnown RBP16.12■□□□□ 0.17
R3HCC1-208ENST00000522012 CCDC28AQ8IWP9 274 aa16.12■□□□□ 0.17
R3HCC1-208ENST00000522012 SLC50A1Q9BRV3 221 aa16.12■□□□□ 0.17
R3HCC1-208ENST00000522012 DNASE2O00115 360 aaPredicted RBP16.11■□□□□ 0.17
R3HCC1-208ENST00000522012 TFPI2P48307 235 aa16.11■□□□□ 0.17
R3HCC1-208ENST00000522012 SLC35B3Q9H1N7 401 aa16.11■□□□□ 0.17
R3HCC1-208ENST00000522012 MS4A6AQ9H2W1 248 aa16.11■□□□□ 0.17
R3HCC1-208ENST00000522012 F6UZH7 168 aa16.1■□□□□ 0.17
R3HCC1-208ENST00000522012 CMTM2Q8TAZ6 248 aa16.1■□□□□ 0.17
R3HCC1-208ENST00000522012 RPH3ALQ9UNE2 315 aa16.1■□□□□ 0.17
R3HCC1-208ENST00000522012 TRAV8-2A0A0B4J237 113 aa16.09■□□□□ 0.17
R3HCC1-208ENST00000522012 SCO2A0A1W2PP80 73 aa16.09■□□□□ 0.17
R3HCC1-208ENST00000522012 SFTA3P0C7M3 94 aa16.09■□□□□ 0.17
R3HCC1-208ENST00000522012 HLA-DMBP28068 263 aa16.09■□□□□ 0.17
R3HCC1-208ENST00000522012 GNG5P63218 68 aa16.09■□□□□ 0.17
R3HCC1-208ENST00000522012 PAFAH1B2P68402 229 aa16.09■□□□□ 0.17
R3HCC1-208ENST00000522012 CD300EQ496F6 205 aaPredicted RBP16.09■□□□□ 0.17
R3HCC1-208ENST00000522012 TMEM61Q8N0U2 210 aa16.09■□□□□ 0.17
R3HCC1-208ENST00000522012 RNF182Q8N6D2 247 aa16.09■□□□□ 0.17
R3HCC1-208ENST00000522012 CYB561D1Q8N8Q1 229 aa16.09■□□□□ 0.17
R3HCC1-208ENST00000522012 C5orf17Q8NAS9 161 aa16.09■□□□□ 0.17
R3HCC1-208ENST00000522012 EPDR1Q9UM22 224 aa16.09■□□□□ 0.17
R3HCC1-208ENST00000522012 TMEM218A2RU14 115 aa16.08■□□□□ 0.16
R3HCC1-208ENST00000522012 M0R3E3 92 aa16.08■□□□□ 0.16
R3HCC1-208ENST00000522012 SOCS3O14543 225 aa16.08■□□□□ 0.16
R3HCC1-208ENST00000522012 PRB4P10163 310 aaPredicted RBP16.08■□□□□ 0.16
R3HCC1-208ENST00000522012 DCANP1Q8TF63 244 aa16.08■□□□□ 0.16
R3HCC1-208ENST00000522012 TMEM250H0YL14 139 aa16.07■□□□□ 0.16
R3HCC1-208ENST00000522012 ID1P41134 155 aa16.07■□□□□ 0.16
R3HCC1-208ENST00000522012 CSN1S1P47710 185 aa16.07■□□□□ 0.16
R3HCC1-208ENST00000522012 LINC00052Q96N35 136 aa16.07■□□□□ 0.16
R3HCC1-208ENST00000522012 PEX7O00628 323 aa16.06■□□□□ 0.16
R3HCC1-208ENST00000522012 ISLRO14498 428 aa16.06■□□□□ 0.16
R3HCC1-208ENST00000522012 TSPAN4O14817 238 aa16.06■□□□□ 0.16
R3HCC1-208ENST00000522012 NDUFS6O75380 124 aaKnown RBP16.06■□□□□ 0.16
R3HCC1-208ENST00000522012 CD33P20138 364 aa16.06■□□□□ 0.16
R3HCC1-208ENST00000522012 SAMD13Q5VXD3 122 aa16.06■□□□□ 0.16
R3HCC1-208ENST00000522012 RPUSD4Q96CM3 377 aaKnown RBP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 158 ms