RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 WT1P19544 449 aaPredicted RBP13.16□□□□□ -0.3
USP42-207ENST00000521713 IGHV4-39P01824 125 aa13.16□□□□□ -0.3
USP42-207ENST00000521713 SIGLEC15Q6ZMC9 328 aa13.16□□□□□ -0.3
USP42-207ENST00000521713 IGLV3-9A0A075B6K5 115 aa13.15□□□□□ -0.3
USP42-207ENST00000521713 A0A087X0K7 114 aa13.15□□□□□ -0.3
USP42-207ENST00000521713 MUC21A0A0G2JKD1 596 aa13.15□□□□□ -0.3
USP42-207ENST00000521713 MUC21A0A140T8X8 626 aa13.15□□□□□ -0.3
USP42-207ENST00000521713 LAGE3Q14657 143 aa13.15□□□□□ -0.3
USP42-207ENST00000521713 MUC21Q5SSG8 566 aa13.15□□□□□ -0.3
USP42-207ENST00000521713 RNF144BQ7Z419 303 aa13.15□□□□□ -0.3
USP42-207ENST00000521713 KLF2Q9Y5W3 355 aaPredicted RBP13.15□□□□□ -0.3
USP42-207ENST00000521713 SAP30O75446 220 aa13.15□□□□□ -0.3
USP42-207ENST00000521713 IGKV1-5P01602 117 aa13.15□□□□□ -0.3
USP42-207ENST00000521713 PLXNA2O75051 1894 aa13.15□□□□□ -0.3
USP42-207ENST00000521713 FNDC10F2Z333 226 aa13.15□□□□□ -0.3
USP42-207ENST00000521713 TRGV9Q99603 122 aa13.15□□□□□ -0.3
USP42-207ENST00000521713 PRO3102Q9H379 93 aa13.15□□□□□ -0.3
USP42-207ENST00000521713 hDV102S1A0JD36 115 aa13.15□□□□□ -0.31
USP42-207ENST00000521713 J3QLI3 93 aa13.14□□□□□ -0.31
USP42-207ENST00000521713 LCN12Q6JVE5 192 aa13.14□□□□□ -0.31
USP42-207ENST00000521713 Q6ZR03 302 aa13.14□□□□□ -0.31
USP42-207ENST00000521713 PIP4P2Q8N4L2 257 aa13.14□□□□□ -0.31
USP42-207ENST00000521713 FAM223BA6NKX1 122 aa13.14□□□□□ -0.31
USP42-207ENST00000521713 CFHR2P36980 270 aa13.14□□□□□ -0.31
USP42-207ENST00000521713 FAM223AQ8IWN6 122 aa13.14□□□□□ -0.31
USP42-207ENST00000521713 Q96MF0 132 aa13.14□□□□□ -0.31
USP42-207ENST00000521713 LINC00473A8K010 186 aa13.14□□□□□ -0.31
USP42-207ENST00000521713 SPINK8P0C7L1 97 aa13.14□□□□□ -0.31
USP42-207ENST00000521713 SLC25A39Q9BZJ4 359 aaPredicted RBP13.14□□□□□ -0.31
USP42-207ENST00000521713 NUP35Q8NFH5 326 aa13.13□□□□□ -0.31
USP42-207ENST00000521713 GFRA4Q9GZZ7 299 aa13.13□□□□□ -0.31
USP42-207ENST00000521713 CADP27708 2225 aa13.13□□□□□ -0.31
USP42-207ENST00000521713 CD7P09564 240 aa13.13□□□□□ -0.31
USP42-207ENST00000521713 IGHV1-69DA0A0B4J2H0 117 aa13.13□□□□□ -0.31
USP42-207ENST00000521713 IGHV1-69P01742 117 aa13.13□□□□□ -0.31
USP42-207ENST00000521713 HTN3P15516 51 aa13.13□□□□□ -0.31
USP42-207ENST00000521713 IGHV2-70DA0A0C4DH43 119 aa13.12□□□□□ -0.31
USP42-207ENST00000521713 TRGV11A0A075B6L2 103 aa13.12□□□□□ -0.31
USP42-207ENST00000521713 TRAV2A0A0B4J234 112 aa13.12□□□□□ -0.31
USP42-207ENST00000521713 C9JQL5 133 aa13.12□□□□□ -0.31
USP42-207ENST00000521713 GLMPQ8WWB7 406 aa13.12□□□□□ -0.31
USP42-207ENST00000521713 IGLC2P0DOY2 106 aa13.12□□□□□ -0.31
USP42-207ENST00000521713 IGLC3P0DOY3 106 aa13.12□□□□□ -0.31
USP42-207ENST00000521713 ADAMTSL5Q6ZMM2 481 aa13.12□□□□□ -0.31
USP42-207ENST00000521713 PLEKHB2Q96CS7 222 aa13.12□□□□□ -0.31
USP42-207ENST00000521713 M0R2P5 195 aa13.12□□□□□ -0.31
USP42-207ENST00000521713 SFTA2Q6UW10 78 aa13.11□□□□□ -0.31
USP42-207ENST00000521713 ZNF562Q6V9R5 426 aa13.11□□□□□ -0.31
USP42-207ENST00000521713 IGKV3OR2-268A0A0C4DH90 116 aa13.11□□□□□ -0.31
USP42-207ENST00000521713 WISP1O95388 367 aa13.11□□□□□ -0.31
USP42-207ENST00000521713 TEX36Q5VZQ5 186 aa13.11□□□□□ -0.31
USP42-207ENST00000521713 SPAG8Q99932 426 aaPredicted RBP13.11□□□□□ -0.31
USP42-207ENST00000521713 PTPRQQ9UMZ3 2332 aa13.11□□□□□ -0.31
USP42-207ENST00000521713 PSG3Q16557 428 aa13.11□□□□□ -0.31
USP42-207ENST00000521713 S100A7L2Q5SY68 101 aa13.11□□□□□ -0.31
USP42-207ENST00000521713 RNF166Q96A37 237 aaPredicted RBP13.11□□□□□ -0.31
USP42-207ENST00000521713 TRAV3A0A0B4J244 114 aa13.11□□□□□ -0.31
USP42-207ENST00000521713 C9orf139Q6ZV77 190 aa13.11□□□□□ -0.31
USP42-207ENST00000521713 C3orf56Q8N813 242 aa13.11□□□□□ -0.31
USP42-207ENST00000521713 KLHL30-AS1Q8NEE0 82 aa13.11□□□□□ -0.31
USP42-207ENST00000521713 D6R8Y8 96 aa13.1□□□□□ -0.31
USP42-207ENST00000521713 TCRAP04437 139 aa13.1□□□□□ -0.31
USP42-207ENST00000521713 FAM231BA6NCW3 169 aa13.1□□□□□ -0.31
USP42-207ENST00000521713 YPEL3P61236 119 aaPredicted RBP13.1□□□□□ -0.31
USP42-207ENST00000521713 KIAA2026Q5HYC2 2103 aa13.1□□□□□ -0.31
USP42-207ENST00000521713 ZNF524Q96C55 264 aa13.1□□□□□ -0.31
USP42-207ENST00000521713 CR1LQ2VPA4 569 aa13.1□□□□□ -0.31
USP42-207ENST00000521713 NPSP0C0P6 89 aa13.1□□□□□ -0.31
USP42-207ENST00000521713 GGTLC3B5MD39 225 aa13.09□□□□□ -0.31
USP42-207ENST00000521713 ZNF329Q86UD4 541 aa13.09□□□□□ -0.31
USP42-207ENST00000521713 ZGRF1Q86YA3 2104 aa13.09□□□□□ -0.31
USP42-207ENST00000521713 LYPD1Q8N2G4 141 aa13.09□□□□□ -0.31
USP42-207ENST00000521713 MORN3Q6PF18 240 aaPredicted RBP13.09□□□□□ -0.31
USP42-207ENST00000521713 CHAC1Q9BUX1 264 aa13.09□□□□□ -0.31
USP42-207ENST00000521713 GTF3C1Q12789 2109 aa13.09□□□□□ -0.31
USP42-207ENST00000521713 C9orf118A6NHY6 69 aa13.09□□□□□ -0.31
USP42-207ENST00000521713 LCNL1Q6ZST4 164 aa13.09□□□□□ -0.31
USP42-207ENST00000521713 NAA38Q9BRA0 125 aaKnown RBP13.09□□□□□ -0.31
USP42-207ENST00000521713 OVOL2Q9BRP0 275 aa13.09□□□□□ -0.31
USP42-207ENST00000521713 SEPSECSQ9HD40 501 aaKnown RBP13.09□□□□□ -0.31
USP42-207ENST00000521713 ZNF581Q9P0T4 197 aa13.09□□□□□ -0.31
USP42-207ENST00000521713 E9PQ18 207 aa13.08□□□□□ -0.31
USP42-207ENST00000521713 LOXP28300 417 aaPredicted RBP13.08□□□□□ -0.31
USP42-207ENST00000521713 NTF4P34130 210 aa13.08□□□□□ -0.32
USP42-207ENST00000521713 RNF138Q8WVD3 245 aa13.08□□□□□ -0.32
USP42-207ENST00000521713 DPH3Q96FX2 82 aa13.08□□□□□ -0.32
USP42-207ENST00000521713 NOTCH2Q04721 2471 aa13.08□□□□□ -0.32
USP42-207ENST00000521713 TRAV8-1A0A0A6YYK1 113 aa13.08□□□□□ -0.32
USP42-207ENST00000521713 ZNF503-AS2A6NEH8 195 aa13.08□□□□□ -0.32
USP42-207ENST00000521713 K7EM74 188 aa13.08□□□□□ -0.32
USP42-207ENST00000521713 LGALS1P09382 135 aaKnown RBP13.08□□□□□ -0.32
USP42-207ENST00000521713 HS3ST6Q96QI5 342 aa13.08□□□□□ -0.32
USP42-207ENST00000521713 ANAPC10Q9UM13 185 aa13.08□□□□□ -0.32
USP42-207ENST00000521713 PMS2P5A8MQ11 134 aa13.07□□□□□ -0.32
USP42-207ENST00000521713 CT83Q5H943 113 aa13.07□□□□□ -0.32
USP42-207ENST00000521713 SPATA31B1PQ5VZV4 182 aa13.07□□□□□ -0.32
USP42-207ENST00000521713 CUL9Q8IWT3 2517 aa13.07□□□□□ -0.32
USP42-207ENST00000521713 F8W1H4 67 aa13.07□□□□□ -0.32
USP42-207ENST00000521713 MED13LQ71F56 2210 aa13.07□□□□□ -0.32
USP42-207ENST00000521713 C5orf24Q7Z6I8 188 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms