RNA–Protein interactions for RNA: ENST00000521049.5

TRAM1-204, Transcript of translocation associated membrane protein 1, humanhuman

TSL 5

Gene TRAM1, Length 872 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-204ENST00000521049 SLC25A6P12236 298 aa11.34□□□□□ -0.59
TRAM1-204ENST00000521049 RPL7P18124 248 aaKnown RBP11.34□□□□□ -0.59
TRAM1-204ENST00000521049 CXCL3P19876 107 aa11.34□□□□□ -0.59
TRAM1-204ENST00000521049 TNFSF8P32971 234 aa11.34□□□□□ -0.59
TRAM1-204ENST00000521049 CDKN1BP46527 198 aa11.34□□□□□ -0.59
TRAM1-204ENST00000521049 DLK1P80370 383 aa11.34□□□□□ -0.59
TRAM1-204ENST00000521049 PSG3Q16557 428 aa11.34□□□□□ -0.59
TRAM1-204ENST00000521049 CIB3Q96Q77 187 aaPredicted RBP11.34□□□□□ -0.59
TRAM1-204ENST00000521049 ANKRD20A5PA0PJZ0 165 aa11.33□□□□□ -0.6
TRAM1-204ENST00000521049 H3BRN7 92 aa11.33□□□□□ -0.6
TRAM1-204ENST00000521049 LYPD1Q8N2G4 141 aa11.33□□□□□ -0.6
TRAM1-204ENST00000521049 C20orf144Q9BQM9 153 aa11.33□□□□□ -0.6
TRAM1-204ENST00000521049 SHANK2-AS3Q9BTD1 123 aa11.33□□□□□ -0.6
TRAM1-204ENST00000521049 ZNF586Q9NXT0 402 aa11.33□□□□□ -0.6
TRAM1-204ENST00000521049 A0A0J9YY99 117 aa11.32□□□□□ -0.6
TRAM1-204ENST00000521049 FABP12A6NFH5 140 aa11.32□□□□□ -0.6
TRAM1-204ENST00000521049 HOXA5P20719 270 aa11.32□□□□□ -0.6
TRAM1-204ENST00000521049 S100A5P33763 92 aa11.32□□□□□ -0.6
TRAM1-204ENST00000521049 RAP2BP61225 183 aa11.32□□□□□ -0.6
TRAM1-204ENST00000521049 SOSTQ9BQB4 213 aa11.32□□□□□ -0.6
TRAM1-204ENST00000521049 NDUFA13Q9P0J0 144 aa11.32□□□□□ -0.6
TRAM1-204ENST00000521049 A0A087X0K7 114 aa11.31□□□□□ -0.6
TRAM1-204ENST00000521049 SYNGR2O43760 224 aa11.31□□□□□ -0.6
TRAM1-204ENST00000521049 PLP1P60201 277 aa11.31□□□□□ -0.6
TRAM1-204ENST00000521049 CCDC28AQ8IWP9 274 aa11.31□□□□□ -0.6
TRAM1-204ENST00000521049 LRTM2Q8N967 370 aa11.31□□□□□ -0.6
TRAM1-204ENST00000521049 LRRC20Q8TCA0 184 aa11.31□□□□□ -0.6
TRAM1-204ENST00000521049 PTTG2Q9NZH5 202 aa11.31□□□□□ -0.6
TRAM1-204ENST00000521049 HIGD1AQ9Y241 93 aa11.31□□□□□ -0.6
TRAM1-204ENST00000521049 WRBO00258 174 aa11.3□□□□□ -0.6
TRAM1-204ENST00000521049 HYPMO75409 117 aa11.3□□□□□ -0.6
TRAM1-204ENST00000521049 IL5P05113 134 aa11.3□□□□□ -0.6
TRAM1-204ENST00000521049 XGP55808 180 aa11.3□□□□□ -0.6
TRAM1-204ENST00000521049 LINC00315P59091 139 aa11.3□□□□□ -0.6
TRAM1-204ENST00000521049 AKR1C1Q04828 323 aa11.3□□□□□ -0.6
TRAM1-204ENST00000521049 Q6ZRN7 208 aaPredicted RBP11.3□□□□□ -0.6
TRAM1-204ENST00000521049 CYP2G1PQ6ZSU1 146 aa11.3□□□□□ -0.6
TRAM1-204ENST00000521049 S100A7AQ86SG5 101 aa11.3□□□□□ -0.6
TRAM1-204ENST00000521049 RPUSD4Q96CM3 377 aaKnown RBP11.3□□□□□ -0.6
TRAM1-204ENST00000521049 MCUBQ9NWR8 336 aa11.3□□□□□ -0.6
TRAM1-204ENST00000521049 GAGE12BA1L429 117 aa11.29□□□□□ -0.6
TRAM1-204ENST00000521049 GAGE7O76087 117 aa11.29□□□□□ -0.6
TRAM1-204ENST00000521049 RLN2P04090 185 aa11.29□□□□□ -0.6
TRAM1-204ENST00000521049 GAGE12FP0CL80 117 aa11.29□□□□□ -0.6
TRAM1-204ENST00000521049 GAGE12GP0CL81 117 aa11.29□□□□□ -0.6
TRAM1-204ENST00000521049 GAGE12IP0CL82 117 aa11.29□□□□□ -0.6
TRAM1-204ENST00000521049 TMEM128Q5BJH2 165 aa11.29□□□□□ -0.6
TRAM1-204ENST00000521049 SPANXN5Q5MJ07 72 aa11.29□□□□□ -0.6
TRAM1-204ENST00000521049 CDPF1Q6NVV7 123 aa11.29□□□□□ -0.6
TRAM1-204ENST00000521049 FAT1Q14517 4588 aa11.29□□□□□ -0.6
TRAM1-204ENST00000521049 EREGO14944 169 aa11.28□□□□□ -0.6
TRAM1-204ENST00000521049 SELENOTP62341 195 aa11.28□□□□□ -0.6
TRAM1-204ENST00000521049 ACOT7LQ6ZUV0 252 aa11.28□□□□□ -0.6
TRAM1-204ENST00000521049 CCDC190Q86UF4 302 aa11.28□□□□□ -0.6
TRAM1-204ENST00000521049 RNF24Q9Y225 148 aa11.28□□□□□ -0.6
TRAM1-204ENST00000521049 STRAPQ9Y3F4 350 aaKnown RBP11.28□□□□□ -0.6
TRAM1-204ENST00000521049 V9GYH0 126 aa11.28□□□□□ -0.6
TRAM1-204ENST00000521049 DMBT1Q9UGM3 2413 aaPredicted RBP11.28□□□□□ -0.6
TRAM1-204ENST00000521049 SNURFLB1AK76 121 aa11.27□□□□□ -0.61
TRAM1-204ENST00000521049 J3QL48 77 aa11.27□□□□□ -0.61
TRAM1-204ENST00000521049 OR5G3P0C626 314 aa11.27□□□□□ -0.61
TRAM1-204ENST00000521049 CXCL2P19875 107 aa11.27□□□□□ -0.61
TRAM1-204ENST00000521049 KIR3DS1Q14943 382 aa11.27□□□□□ -0.61
TRAM1-204ENST00000521049 PYDC2Q56P42 97 aa11.27□□□□□ -0.61
TRAM1-204ENST00000521049 FRZBQ92765 325 aa11.27□□□□□ -0.61
TRAM1-204ENST00000521049 A0A096LPF7 62 aa11.26□□□□□ -0.61
TRAM1-204ENST00000521049 MRPS12O15235 138 aaKnown RBP11.26□□□□□ -0.61
TRAM1-204ENST00000521049 LINC00869P0C866 280 aa11.26□□□□□ -0.61
TRAM1-204ENST00000521049 DAZ2Q13117 558 aaKnown RBP11.26□□□□□ -0.61
TRAM1-204ENST00000521049 C4orf46Q504U0 113 aa11.26□□□□□ -0.61
TRAM1-204ENST00000521049 Q5VSD8 79 aa11.26□□□□□ -0.61
TRAM1-204ENST00000521049 ZNF331Q9NQX6 463 aaPredicted RBP11.26□□□□□ -0.61
TRAM1-204ENST00000521049 PMS2P5A8MQ11 134 aa11.25□□□□□ -0.61
TRAM1-204ENST00000521049 SIVA1O15304 175 aa11.25□□□□□ -0.61
TRAM1-204ENST00000521049 ANXA7P20073 488 aaKnown RBP11.25□□□□□ -0.61
TRAM1-204ENST00000521049 ERVFC1-1P60608 527 aa11.25□□□□□ -0.61
TRAM1-204ENST00000521049 SPANXN2Q5MJ10 180 aa11.25□□□□□ -0.61
TRAM1-204ENST00000521049 GFI1BQ5VTD9 330 aa11.25□□□□□ -0.61
TRAM1-204ENST00000521049 PATE2Q6UY27 113 aa11.25□□□□□ -0.61
TRAM1-204ENST00000521049 VSIG2Q96IQ7 327 aa11.25□□□□□ -0.61
TRAM1-204ENST00000521049 SLC50A1Q9BRV3 221 aa11.25□□□□□ -0.61
TRAM1-204ENST00000521049 SMCO3A2RU48 225 aa11.24□□□□□ -0.61
TRAM1-204ENST00000521049 H3BP45 60 aa11.24□□□□□ -0.61
TRAM1-204ENST00000521049 PRB4P10163 310 aaPredicted RBP11.24□□□□□ -0.61
TRAM1-204ENST00000521049 LCN15Q6UWW0 184 aa11.24□□□□□ -0.61
TRAM1-204ENST00000521049 TMED4Q7Z7H5 227 aa11.24□□□□□ -0.61
TRAM1-204ENST00000521049 TRIM63Q969Q1 353 aa11.24□□□□□ -0.61
TRAM1-204ENST00000521049 C18orf15Q96N68 181 aa11.24□□□□□ -0.61
TRAM1-204ENST00000521049 TMPRSS5Q9H3S3 457 aa11.24□□□□□ -0.61
TRAM1-204ENST00000521049 IFNA5P01569 189 aa11.23□□□□□ -0.61
TRAM1-204ENST00000521049 VAMP1P23763 118 aa11.23□□□□□ -0.61
TRAM1-204ENST00000521049 ID3Q02535 119 aa11.23□□□□□ -0.61
TRAM1-204ENST00000521049 PXDC1Q5TGL8 231 aa11.23□□□□□ -0.61
TRAM1-204ENST00000521049 PYGO2Q9BRQ0 406 aa11.23□□□□□ -0.61
TRAM1-204ENST00000521049 PARD6GQ9BYG4 376 aaPredicted RBP11.23□□□□□ -0.61
TRAM1-204ENST00000521049 ARL6Q9H0F7 186 aa11.23□□□□□ -0.61
TRAM1-204ENST00000521049 ARV1Q9H2C2 271 aa11.23□□□□□ -0.61
TRAM1-204ENST00000521049 NPVFQ9HCQ7 196 aa11.23□□□□□ -0.61
TRAM1-204ENST00000521049 K7EPK0 472 aa11.22□□□□□ -0.61
TRAM1-204ENST00000521049 SFT2D2O95562 160 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms