RNA–Protein interactions for RNA: ENST00000520700.1

TRAM1-203, Transcript of translocation associated membrane protein 1, humanhuman

TSL 5

Gene TRAM1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-203ENST00000520700 LCN15Q6UWW0 184 aa12.94□□□□□ -0.34
TRAM1-203ENST00000520700 PQLC2Q6ZP29 291 aa12.94□□□□□ -0.34
TRAM1-203ENST00000520700 FAM24BQ8N5W8 94 aa12.94□□□□□ -0.34
TRAM1-203ENST00000520700 ZNF503Q96F45 646 aa12.94□□□□□ -0.34
TRAM1-203ENST00000520700 SLC50A1Q9BRV3 221 aa12.94□□□□□ -0.34
TRAM1-203ENST00000520700 TRBV19A0A075B6N1 114 aa12.93□□□□□ -0.34
TRAM1-203ENST00000520700 STAG3L2P0CL84 134 aa12.93□□□□□ -0.34
TRAM1-203ENST00000520700 STAG3L3P0CL85 134 aa12.93□□□□□ -0.34
TRAM1-203ENST00000520700 FAM122CQ6P4D5 195 aa12.93□□□□□ -0.34
TRAM1-203ENST00000520700 RAB24Q969Q5 203 aa12.93□□□□□ -0.34
TRAM1-203ENST00000520700 C16orf92Q96LL3 132 aa12.93□□□□□ -0.34
TRAM1-203ENST00000520700 PAXXQ9BUH6 204 aa12.93□□□□□ -0.34
TRAM1-203ENST00000520700 ZNF586Q9NXT0 402 aa12.93□□□□□ -0.34
TRAM1-203ENST00000520700 PLA2G2EQ9NZK7 142 aa12.93□□□□□ -0.34
TRAM1-203ENST00000520700 TRAV8-2A0A0B4J237 113 aa12.92□□□□□ -0.34
TRAM1-203ENST00000520700 ZNF688P0C7X2 276 aa12.92□□□□□ -0.34
TRAM1-203ENST00000520700 NKX2-5P52952 324 aaPredicted RBP12.92□□□□□ -0.34
TRAM1-203ENST00000520700 DEFB131AP59861 70 aa12.92□□□□□ -0.34
TRAM1-203ENST00000520700 DPPA3Q6W0C5 159 aa12.92□□□□□ -0.34
TRAM1-203ENST00000520700 LINC00322Q6ZN03 302 aaPredicted RBP12.92□□□□□ -0.34
TRAM1-203ENST00000520700 DEFB125Q8N687 156 aa12.92□□□□□ -0.34
TRAM1-203ENST00000520700 SUN5Q8TC36 379 aa12.92□□□□□ -0.34
TRAM1-203ENST00000520700 RNF141Q8WVD5 230 aa12.92□□□□□ -0.34
TRAM1-203ENST00000520700 FXYD5Q96DB9 178 aa12.92□□□□□ -0.34
TRAM1-203ENST00000520700 ZNF331Q9NQX6 463 aaPredicted RBP12.92□□□□□ -0.34
TRAM1-203ENST00000520700 CTXND1A0A1B0GTU2 59 aa12.91□□□□□ -0.34
TRAM1-203ENST00000520700 NBEAP1P0C6P0 100 aa12.91□□□□□ -0.34
TRAM1-203ENST00000520700 IGHV4-30-4P0DP06 118 aa12.91□□□□□ -0.34
TRAM1-203ENST00000520700 PYYP10082 97 aa12.91□□□□□ -0.34
TRAM1-203ENST00000520700 RAB5CP51148 216 aa12.91□□□□□ -0.34
TRAM1-203ENST00000520700 TMED6Q8WW62 240 aa12.91□□□□□ -0.34
TRAM1-203ENST00000520700 UBQLN2Q9UHD9 624 aa12.91□□□□□ -0.34
TRAM1-203ENST00000520700 OR7C2O60412 319 aa12.9□□□□□ -0.34
TRAM1-203ENST00000520700 NDUFB4O95168 129 aa12.9□□□□□ -0.34
TRAM1-203ENST00000520700 ZNF726P1Q15940 193 aa12.9□□□□□ -0.34
TRAM1-203ENST00000520700 PSMG4Q5JS54 123 aa12.9□□□□□ -0.34
TRAM1-203ENST00000520700 LYPD1Q8N2G4 141 aa12.9□□□□□ -0.34
TRAM1-203ENST00000520700 LRRC20Q8TCA0 184 aa12.9□□□□□ -0.34
TRAM1-203ENST00000520700 MRAPQ8TCY5 172 aa12.9□□□□□ -0.34
TRAM1-203ENST00000520700 PHYHIPLQ96FC7 376 aa12.9□□□□□ -0.34
TRAM1-203ENST00000520700 CITED4Q96RK1 184 aa12.9□□□□□ -0.34
TRAM1-203ENST00000520700 CXorf1O96002 111 aa12.89□□□□□ -0.35
TRAM1-203ENST00000520700 PSG9Q00887 426 aa12.89□□□□□ -0.35
TRAM1-203ENST00000520700 PSG3Q16557 428 aa12.89□□□□□ -0.35
TRAM1-203ENST00000520700 APRG1Q8IVJ8 170 aa12.89□□□□□ -0.35
TRAM1-203ENST00000520700 MBD3L1Q8WWY6 194 aa12.89□□□□□ -0.35
TRAM1-203ENST00000520700 WFDC10AQ9H1F0 79 aa12.89□□□□□ -0.35
TRAM1-203ENST00000520700 TUBA4BQ9H853 241 aa12.89□□□□□ -0.35
TRAM1-203ENST00000520700 SRD5A3Q9H8P0 318 aa12.89□□□□□ -0.35
TRAM1-203ENST00000520700 DEFB121Q5J5C9 76 aa12.88□□□□□ -0.35
TRAM1-203ENST00000520700 MRPL53Q96EL3 112 aaKnown RBP12.88□□□□□ -0.35
TRAM1-203ENST00000520700 C20orf173Q96LM9 149 aa12.88□□□□□ -0.35
TRAM1-203ENST00000520700 LINC00052Q96N35 136 aa12.88□□□□□ -0.35
TRAM1-203ENST00000520700 CLUHP3Q96NS8 147 aa12.88□□□□□ -0.35
TRAM1-203ENST00000520700 PRELID1Q9Y255 219 aa12.88□□□□□ -0.35
TRAM1-203ENST00000520700 SLC17A3O00476 420 aa12.87□□□□□ -0.35
TRAM1-203ENST00000520700 OR10J4P0C629 311 aa12.87□□□□□ -0.35
TRAM1-203ENST00000520700 ARL14EPLP0DKL9 152 aa12.87□□□□□ -0.35
TRAM1-203ENST00000520700 SULT1A2P50226 295 aa12.87□□□□□ -0.35
TRAM1-203ENST00000520700 UBE2L3P68036 154 aaKnown RBP12.87□□□□□ -0.35
TRAM1-203ENST00000520700 FOXI2Q6ZQN5 318 aa12.87□□□□□ -0.35
TRAM1-203ENST00000520700 SSX7Q7RTT5 188 aa12.87□□□□□ -0.35
TRAM1-203ENST00000520700 TMEM167BQ9NRX6 74 aa12.87□□□□□ -0.35
TRAM1-203ENST00000520700 BOLA1Q9Y3E2 137 aa12.87□□□□□ -0.35
TRAM1-203ENST00000520700 RBMY1BA6NDE4 496 aaKnown RBP12.86□□□□□ -0.35
TRAM1-203ENST00000520700 RBMY1EA6NEQ0 496 aaKnown RBP12.86□□□□□ -0.35
TRAM1-203ENST00000520700 SNRPCP09234 159 aaKnown RBP12.86□□□□□ -0.35
TRAM1-203ENST00000520700 RBMY1DP0C7P1 496 aaKnown RBP12.86□□□□□ -0.35
TRAM1-203ENST00000520700 FRMD6-AS1P0C7T7 363 aa12.86□□□□□ -0.35
TRAM1-203ENST00000520700 GCHFRP30047 84 aa12.86□□□□□ -0.35
TRAM1-203ENST00000520700 SAV1Q9H4B6 383 aaPredicted RBP12.86□□□□□ -0.35
TRAM1-203ENST00000520700 LOC102724200A0A096LPH7 203 aaPredicted RBP12.85□□□□□ -0.35
TRAM1-203ENST00000520700 KIR2DL5BA0A0G2JN68 375 aa12.85□□□□□ -0.35
TRAM1-203ENST00000520700 KIR2DL5BA0A0G2JPC4 375 aa12.85□□□□□ -0.35
TRAM1-203ENST00000520700 A8MTW9 85 aa12.85□□□□□ -0.35
TRAM1-203ENST00000520700 H3BMM0 161 aa12.85□□□□□ -0.35
TRAM1-203ENST00000520700 H3BTX0 84 aa12.85□□□□□ -0.35
TRAM1-203ENST00000520700 BOLA2-SMG1P6H3BVE0 249 aa12.85□□□□□ -0.35
TRAM1-203ENST00000520700 HMGB3O15347 200 aaKnown RBP12.85□□□□□ -0.35
TRAM1-203ENST00000520700 EIF3GO75821 320 aaKnown RBP eCLIP12.85□□□□□ -0.35
TRAM1-203ENST00000520700 HLA-DRB4P13762 266 aa12.85□□□□□ -0.35
TRAM1-203ENST00000520700 FHITP49789 147 aa12.85□□□□□ -0.35
TRAM1-203ENST00000520700 ZNF124Q15973 351 aa12.85□□□□□ -0.35
TRAM1-203ENST00000520700 IGFL4Q6B9Z1 124 aa12.85□□□□□ -0.35
TRAM1-203ENST00000520700 KIR2DL5AQ8N109 375 aa12.85□□□□□ -0.35
TRAM1-203ENST00000520700 ARL6IP6Q8N6S5 226 aa12.85□□□□□ -0.35
TRAM1-203ENST00000520700 KIR2DL5BQ8NHK3 375 aa12.85□□□□□ -0.35
TRAM1-203ENST00000520700 BLNKQ8WV28 456 aa12.85□□□□□ -0.35
TRAM1-203ENST00000520700 HLA-DRB4X5D2U9 266 aa12.85□□□□□ -0.35
TRAM1-203ENST00000520700 TRAV1-1A0A0B4J248 108 aa12.84□□□□□ -0.35
TRAM1-203ENST00000520700 A0A0J9YX75 114 aa12.84□□□□□ -0.35
TRAM1-203ENST00000520700 MAP1LC3B2A6NCE7 125 aa12.84□□□□□ -0.35
TRAM1-203ENST00000520700 HLA-DMBP28068 263 aa12.84□□□□□ -0.35
TRAM1-203ENST00000520700 EBLN2Q6P2I7 272 aa12.84□□□□□ -0.35
TRAM1-203ENST00000520700 TRPT1Q86TN4 253 aaKnown RBP12.84□□□□□ -0.35
TRAM1-203ENST00000520700 RNF182Q8N6D2 247 aa12.84□□□□□ -0.35
TRAM1-203ENST00000520700 FAM213BQ8TBF2 198 aa12.84□□□□□ -0.35
TRAM1-203ENST00000520700 B9D2Q9BPU9 175 aa12.84□□□□□ -0.35
TRAM1-203ENST00000520700 MAP1LC3BQ9GZQ8 125 aa12.84□□□□□ -0.35
TRAM1-203ENST00000520700 AAMDCQ9H7C9 122 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms