RNA–Protein interactions for RNA: ENST00000520561.1

CSMD1-208, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-208ENST00000520561 TXNDC17Q9BRA2 123 aa6.79□□□□□ -1.32
CSMD1-208ENST00000520561 SLC50A1Q9BRV3 221 aa6.79□□□□□ -1.32
CSMD1-208ENST00000520561 NKX6-2Q9C056 277 aaPredicted RBP6.79□□□□□ -1.32
CSMD1-208ENST00000520561 AAMDCQ9H7C9 122 aa6.79□□□□□ -1.32
CSMD1-208ENST00000520561 NRN1Q9NPD7 142 aa6.79□□□□□ -1.32
CSMD1-208ENST00000520561 ZNF586Q9NXT0 402 aa6.79□□□□□ -1.32
CSMD1-208ENST00000520561 SIGLEC8Q9NYZ4 499 aa6.79□□□□□ -1.32
CSMD1-208ENST00000520561 IGKV3-7A0A075B6H7 116 aa6.78□□□□□ -1.32
CSMD1-208ENST00000520561 C11orf94C9JXX5 98 aa6.78□□□□□ -1.32
CSMD1-208ENST00000520561 SAP30O75446 220 aa6.78□□□□□ -1.32
CSMD1-208ENST00000520561 ATP5G3P48201 142 aa6.78□□□□□ -1.32
CSMD1-208ENST00000520561 RIPPLY3P57055 190 aa6.78□□□□□ -1.32
CSMD1-208ENST00000520561 RANP62826 216 aaKnown RBP6.78□□□□□ -1.32
CSMD1-208ENST00000520561 UQCC3Q6UW78 93 aa6.78□□□□□ -1.32
CSMD1-208ENST00000520561 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.78□□□□□ -1.32
CSMD1-208ENST00000520561 RBPMS2Q6ZRY4 209 aaKnown RBP6.78□□□□□ -1.32
CSMD1-208ENST00000520561 LYPD1Q8N2G4 141 aa6.78□□□□□ -1.32
CSMD1-208ENST00000520561 RXFP4Q8TDU9 374 aa6.78□□□□□ -1.32
CSMD1-208ENST00000520561 C16orf92Q96LL3 132 aa6.78□□□□□ -1.32
CSMD1-208ENST00000520561 TCEAL7Q9BRU2 100 aa6.78□□□□□ -1.32
CSMD1-208ENST00000520561 Q9H3A6 140 aa6.78□□□□□ -1.32
CSMD1-208ENST00000520561 TREM1Q9NP99 234 aa6.78□□□□□ -1.32
CSMD1-208ENST00000520561 OTORQ9NRC9 128 aa6.78□□□□□ -1.32
CSMD1-208ENST00000520561 MLXQ9UH92 298 aa6.78□□□□□ -1.32
CSMD1-208ENST00000520561 YTHDF2Q9Y5A9 579 aaKnown RBP6.78□□□□□ -1.32
CSMD1-208ENST00000520561 SMAD5-AS1Q9Y6J3 95 aa6.78□□□□□ -1.32
CSMD1-208ENST00000520561 GGTLC3B5MD39 225 aa6.77□□□□□ -1.33
CSMD1-208ENST00000520561 F6UZH7 168 aa6.77□□□□□ -1.33
CSMD1-208ENST00000520561 DNASE2O00115 360 aaPredicted RBP6.77□□□□□ -1.33
CSMD1-208ENST00000520561 SLC17A3O00476 420 aa6.77□□□□□ -1.33
CSMD1-208ENST00000520561 PDE6DO43924 150 aa6.77□□□□□ -1.33
CSMD1-208ENST00000520561 CD33P20138 364 aa6.77□□□□□ -1.33
CSMD1-208ENST00000520561 PAFAH1B2P68402 229 aa6.77□□□□□ -1.33
CSMD1-208ENST00000520561 ICAM4Q14773 271 aa6.77□□□□□ -1.33
CSMD1-208ENST00000520561 FAM90A2PQ658T7 463 aa6.77□□□□□ -1.33
CSMD1-208ENST00000520561 ADAMTSL5Q6ZMM2 481 aa6.77□□□□□ -1.33
CSMD1-208ENST00000520561 CMTM2Q8TAZ6 248 aa6.77□□□□□ -1.33
CSMD1-208ENST00000520561 RARRES2Q99969 163 aa6.77□□□□□ -1.33
CSMD1-208ENST00000520561 SMDT1Q9H4I9 107 aa6.77□□□□□ -1.33
CSMD1-208ENST00000520561 CLEC5AQ9NY25 188 aa6.77□□□□□ -1.33
CSMD1-208ENST00000520561 SETD2Q9BYW2 2564 aaPredicted RBP6.76□□□□□ -1.33
CSMD1-208ENST00000520561 TRAV25A0A0B4J276 109 aa6.76□□□□□ -1.33
CSMD1-208ENST00000520561 PGPA6NDG6 321 aa6.76□□□□□ -1.33
CSMD1-208ENST00000520561 TSPAN4O14817 238 aa6.76□□□□□ -1.33
CSMD1-208ENST00000520561 NDUFS6O75380 124 aaKnown RBP6.76□□□□□ -1.33
CSMD1-208ENST00000520561 NDUFB4O95168 129 aa6.76□□□□□ -1.33
CSMD1-208ENST00000520561 SLC25A5P05141 298 aaKnown RBP6.76□□□□□ -1.33
CSMD1-208ENST00000520561 ID1P41134 155 aa6.76□□□□□ -1.33
CSMD1-208ENST00000520561 CSN1S1P47710 185 aa6.76□□□□□ -1.33
CSMD1-208ENST00000520561 SUMO1P63165 101 aaKnown RBP6.76□□□□□ -1.33
CSMD1-208ENST00000520561 DEFB114Q30KQ6 69 aa6.76□□□□□ -1.33
CSMD1-208ENST00000520561 C9orf66Q5T8R8 295 aa6.76□□□□□ -1.33
CSMD1-208ENST00000520561 TMEM61Q8N0U2 210 aa6.76□□□□□ -1.33
CSMD1-208ENST00000520561 EIF4E3Q8N5X7 224 aaKnown RBP6.76□□□□□ -1.33
CSMD1-208ENST00000520561 C5orf17Q8NAS9 161 aa6.76□□□□□ -1.33
CSMD1-208ENST00000520561 OR2K2Q8NGT1 345 aa6.76□□□□□ -1.33
CSMD1-208ENST00000520561 C17orf77Q96MU5 243 aa6.76□□□□□ -1.33
CSMD1-208ENST00000520561 MCRIP2Q9BUT9 160 aaKnown RBP6.76□□□□□ -1.33
CSMD1-208ENST00000520561 ZNF331Q9NQX6 463 aaPredicted RBP6.76□□□□□ -1.33
CSMD1-208ENST00000520561 RPH3ALQ9UNE2 315 aa6.76□□□□□ -1.33
CSMD1-208ENST00000520561 PRELID1Q9Y255 219 aa6.76□□□□□ -1.33
CSMD1-208ENST00000520561 SELENOKQ9Y6D0 94 aa6.76□□□□□ -1.33
CSMD1-208ENST00000520561 TRAV2A0A0B4J234 112 aa6.75□□□□□ -1.33
CSMD1-208ENST00000520561 SCO2A0A1W2PP80 73 aa6.75□□□□□ -1.33
CSMD1-208ENST00000520561 OR4C46A6NHA9 309 aa6.75□□□□□ -1.33
CSMD1-208ENST00000520561 ISLRO14498 428 aa6.75□□□□□ -1.33
CSMD1-208ENST00000520561 SOCS3O14543 225 aa6.75□□□□□ -1.33
CSMD1-208ENST00000520561 AKR1C3P42330 323 aa6.75□□□□□ -1.33
CSMD1-208ENST00000520561 TFPI2P48307 235 aa6.75□□□□□ -1.33
CSMD1-208ENST00000520561 INSL3P51460 131 aa6.75□□□□□ -1.33
CSMD1-208ENST00000520561 CEBPGP53567 150 aa6.75□□□□□ -1.33
CSMD1-208ENST00000520561 CD81P60033 236 aa6.75□□□□□ -1.33
CSMD1-208ENST00000520561 SNRPD3P62318 126 aaKnown RBP6.75□□□□□ -1.33
CSMD1-208ENST00000520561 CD300EQ496F6 205 aaPredicted RBP6.75□□□□□ -1.33
CSMD1-208ENST00000520561 LCN12Q6JVE5 192 aa6.75□□□□□ -1.33
CSMD1-208ENST00000520561 WFDC3Q8IUB2 231 aa6.75□□□□□ -1.33
CSMD1-208ENST00000520561 EXOC3-AS1Q8N2X6 119 aa6.75□□□□□ -1.33
CSMD1-208ENST00000520561 GBGT1Q8N5D6 347 aa6.75□□□□□ -1.33
CSMD1-208ENST00000520561 HIST1H2BAQ96A08 127 aa6.75□□□□□ -1.33
CSMD1-208ENST00000520561 MRPL53Q96EL3 112 aaKnown RBP6.75□□□□□ -1.33
CSMD1-208ENST00000520561 CITED4Q96RK1 184 aa6.75□□□□□ -1.33
CSMD1-208ENST00000520561 SPAG8Q99932 426 aaPredicted RBP6.75□□□□□ -1.33
CSMD1-208ENST00000520561 MS4A6AQ9H2W1 248 aa6.75□□□□□ -1.33
CSMD1-208ENST00000520561 SERTM2A0A1B0GWG4 89 aa6.74□□□□□ -1.33
CSMD1-208ENST00000520561 TMEM250H0YL14 139 aa6.74□□□□□ -1.33
CSMD1-208ENST00000520561 K7EQM0 130 aa6.74□□□□□ -1.33
CSMD1-208ENST00000520561 PEX7O00628 323 aa6.74□□□□□ -1.33
CSMD1-208ENST00000520561 IGLV1-51P01701 117 aa6.74□□□□□ -1.33
CSMD1-208ENST00000520561 SRP19P09132 144 aaKnown RBP6.74□□□□□ -1.33
CSMD1-208ENST00000520561 CNN1P51911 297 aaKnown RBP6.74□□□□□ -1.33
CSMD1-208ENST00000520561 GNG5P63218 68 aa6.74□□□□□ -1.33
CSMD1-208ENST00000520561 SRSF3P84103 164 aaKnown RBP6.74□□□□□ -1.33
CSMD1-208ENST00000520561 GUCA2BQ16661 112 aa6.74□□□□□ -1.33
CSMD1-208ENST00000520561 CCDC28AQ8IWP9 274 aa6.74□□□□□ -1.33
CSMD1-208ENST00000520561 SLC7A5P1Q8MH63 180 aa6.74□□□□□ -1.33
CSMD1-208ENST00000520561 RNF182Q8N6D2 247 aa6.74□□□□□ -1.33
CSMD1-208ENST00000520561 ZNF738Q8NE65 137 aa6.74□□□□□ -1.33
CSMD1-208ENST00000520561 C11orf52Q96A22 123 aa6.74□□□□□ -1.33
CSMD1-208ENST00000520561 RPUSD4Q96CM3 377 aaKnown RBP6.74□□□□□ -1.33
CSMD1-208ENST00000520561 ATG101Q9BSB4 218 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms