RNA–Protein interactions for RNA: ENST00000520260.5

CTNNA1-220, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-220ENST00000520260 RPP25LQ8N5L8 163 aaKnown RBP4.41□□□□□ -1.7
CTNNA1-220ENST00000520260 OR2D3Q8NGH3 330 aa4.41□□□□□ -1.7
CTNNA1-220ENST00000520260 OR1N2Q8NGR9 330 aa4.41□□□□□ -1.7
CTNNA1-220ENST00000520260 TXN2Q99757 166 aa4.41□□□□□ -1.7
CTNNA1-220ENST00000520260 VAMP8Q9BV40 100 aa4.41□□□□□ -1.7
CTNNA1-220ENST00000520260 TMEM147Q9BVK8 224 aa4.41□□□□□ -1.7
CTNNA1-220ENST00000520260 PEF1Q9UBV8 284 aaKnown RBP4.41□□□□□ -1.7
CTNNA1-220ENST00000520260 SLC45A2Q9UMX9 530 aa4.41□□□□□ -1.7
CTNNA1-220ENST00000520260 TET2Q6N021 2002 aaPredicted RBP4.41□□□□□ -1.7
CTNNA1-220ENST00000520260 INS-IGF2F8WCM5 200 aa4.4□□□□□ -1.71
CTNNA1-220ENST00000520260 NUPR1O60356 82 aa4.4□□□□□ -1.71
CTNNA1-220ENST00000520260 PROP1O75360 226 aa4.4□□□□□ -1.71
CTNNA1-220ENST00000520260 TOMM40O96008 361 aa4.4□□□□□ -1.71
CTNNA1-220ENST00000520260 IGKV1-39P01597 117 aa4.4□□□□□ -1.71
CTNNA1-220ENST00000520260 IGKV1D-39P04432 117 aa4.4□□□□□ -1.71
CTNNA1-220ENST00000520260 CRYGCP07315 174 aa4.4□□□□□ -1.71
CTNNA1-220ENST00000520260 NPPCP23582 126 aa4.4□□□□□ -1.71
CTNNA1-220ENST00000520260 PPIFP30405 207 aaKnown RBP4.4□□□□□ -1.71
CTNNA1-220ENST00000520260 CTRLP40313 264 aa4.4□□□□□ -1.71
CTNNA1-220ENST00000520260 CDKN1BP46527 198 aa4.4□□□□□ -1.71
CTNNA1-220ENST00000520260 MFAP4P55083 255 aa4.4□□□□□ -1.71
CTNNA1-220ENST00000520260 LINC00310P59036 64 aa4.4□□□□□ -1.71
CTNNA1-220ENST00000520260 RBX1P62877 108 aa4.4□□□□□ -1.71
CTNNA1-220ENST00000520260 CFHR3Q02985 330 aa4.4□□□□□ -1.71
CTNNA1-220ENST00000520260 C21orf62-AS1Q17RA5 79 aa4.4□□□□□ -1.71
CTNNA1-220ENST00000520260 C15orf32Q32M92 178 aa4.4□□□□□ -1.71
CTNNA1-220ENST00000520260 TMEM95Q3KNT9 176 aa4.4□□□□□ -1.71
CTNNA1-220ENST00000520260 COX19Q49B96 90 aa4.4□□□□□ -1.71
CTNNA1-220ENST00000520260 ACSM6Q6P461 480 aa4.4□□□□□ -1.71
CTNNA1-220ENST00000520260 TOMM20LQ6UXN7 152 aa4.4□□□□□ -1.71
CTNNA1-220ENST00000520260 Q6ZRM9 215 aa4.4□□□□□ -1.71
CTNNA1-220ENST00000520260 LCNL1Q6ZST4 164 aa4.4□□□□□ -1.71
CTNNA1-220ENST00000520260 VKORC1L1Q8N0U8 176 aa4.4□□□□□ -1.71
CTNNA1-220ENST00000520260 ZNF491Q8N8L2 437 aa4.4□□□□□ -1.71
CTNNA1-220ENST00000520260 C11orf44Q8N8P7 122 aa4.4□□□□□ -1.71
CTNNA1-220ENST00000520260 ZNF114Q8NC26 417 aa4.4□□□□□ -1.71
CTNNA1-220ENST00000520260 OR5T1Q8NG75 326 aa4.4□□□□□ -1.71
CTNNA1-220ENST00000520260 SLC35E1Q96K37 410 aa4.4□□□□□ -1.71
CTNNA1-220ENST00000520260 RNF2Q99496 336 aa4.4□□□□□ -1.71
CTNNA1-220ENST00000520260 FAM103A1Q9BTL3 118 aaKnown RBP4.4□□□□□ -1.71
CTNNA1-220ENST00000520260 DNAJC4Q9NNZ3 241 aa4.4□□□□□ -1.71
CTNNA1-220ENST00000520260 KCNIP2Q9NS61 270 aa4.4□□□□□ -1.71
CTNNA1-220ENST00000520260 UQCR10Q9UDW1 63 aa4.4□□□□□ -1.71
CTNNA1-220ENST00000520260 CACNG5Q9UF02 275 aa4.4□□□□□ -1.71
CTNNA1-220ENST00000520260 LINC00527Q9UJ94 153 aa4.4□□□□□ -1.71
CTNNA1-220ENST00000520260 FBXL7Q9UJT9 491 aa4.4□□□□□ -1.71
CTNNA1-220ENST00000520260 TP53TG3Q9ULZ0 132 aa4.4□□□□□ -1.71
CTNNA1-220ENST00000520260 UFC1Q9Y3C8 167 aa4.4□□□□□ -1.71
CTNNA1-220ENST00000520260 F11RQ9Y624 299 aaKnown RBP4.4□□□□□ -1.71
CTNNA1-220ENST00000520260 LY96Q9Y6Y9 160 aa4.4□□□□□ -1.71
CTNNA1-220ENST00000520260 TEX50A0A1B0GTY4 177 aa4.39□□□□□ -1.71
CTNNA1-220ENST00000520260 SH2D7A6NKC9 451 aaPredicted RBP4.39□□□□□ -1.71
CTNNA1-220ENST00000520260 SRRM4A7MD48 611 aaKnown RBP4.39□□□□□ -1.71
CTNNA1-220ENST00000520260 PMS2P5A8MQ11 134 aa4.39□□□□□ -1.71
CTNNA1-220ENST00000520260 C11orf94C9JXX5 98 aa4.39□□□□□ -1.71
CTNNA1-220ENST00000520260 C17orf112F2Z3M2 114 aa4.39□□□□□ -1.71
CTNNA1-220ENST00000520260 G3V318 75 aa4.39□□□□□ -1.71
CTNNA1-220ENST00000520260 H3BP45 60 aa4.39□□□□□ -1.71
CTNNA1-220ENST00000520260 FCN1O00602 326 aa4.39□□□□□ -1.71
CTNNA1-220ENST00000520260 OVOL1O14753 267 aa4.39□□□□□ -1.71
CTNNA1-220ENST00000520260 GNG7O60262 68 aa4.39□□□□□ -1.71
CTNNA1-220ENST00000520260 PAGE4O60829 102 aa4.39□□□□□ -1.71
CTNNA1-220ENST00000520260 IGKV1-5P01602 117 aa4.39□□□□□ -1.71
CTNNA1-220ENST00000520260 P0C879 139 aa4.39□□□□□ -1.71
CTNNA1-220ENST00000520260 IAPPP10997 89 aa4.39□□□□□ -1.71
CTNNA1-220ENST00000520260 CRISP2P16562 243 aa4.39□□□□□ -1.71
CTNNA1-220ENST00000520260 ADMP35318 185 aa4.39□□□□□ -1.71
CTNNA1-220ENST00000520260 ARL3P36405 182 aa4.39□□□□□ -1.71
CTNNA1-220ENST00000520260 OPRK1P41145 380 aa4.39□□□□□ -1.71
CTNNA1-220ENST00000520260 OR5I1Q13606 314 aa4.39□□□□□ -1.71
CTNNA1-220ENST00000520260 ZNF585BQ52M93 769 aa4.39□□□□□ -1.71
CTNNA1-220ENST00000520260 Q56UQ5 140 aa4.39□□□□□ -1.71
CTNNA1-220ENST00000520260 LEMD1Q68G75 181 aa4.39□□□□□ -1.71
CTNNA1-220ENST00000520260 LCN12Q6JVE5 192 aa4.39□□□□□ -1.71
CTNNA1-220ENST00000520260 C8orf86Q6ZUL3 223 aa4.39□□□□□ -1.71
CTNNA1-220ENST00000520260 Q8N976 141 aa4.39□□□□□ -1.71
CTNNA1-220ENST00000520260 SLC24A4Q8NFF2 622 aa4.39□□□□□ -1.71
CTNNA1-220ENST00000520260 OR11H1Q8NG94 326 aa4.39□□□□□ -1.71
CTNNA1-220ENST00000520260 OR10G9Q8NGN4 311 aa4.39□□□□□ -1.71
CTNNA1-220ENST00000520260 OR10G8Q8NGN5 311 aa4.39□□□□□ -1.71
CTNNA1-220ENST00000520260 OR10G7Q8NGN6 311 aa4.39□□□□□ -1.71
CTNNA1-220ENST00000520260 OR2K2Q8NGT1 345 aa4.39□□□□□ -1.71
CTNNA1-220ENST00000520260 DYNLRB2Q8TF09 96 aa4.39□□□□□ -1.71
CTNNA1-220ENST00000520260 C5orf30Q96GV9 206 aa4.39□□□□□ -1.71
CTNNA1-220ENST00000520260 GRAMD2BQ96HH9 432 aa4.39□□□□□ -1.71
CTNNA1-220ENST00000520260 GNB4Q9HAV0 340 aa4.39□□□□□ -1.71
CTNNA1-220ENST00000520260 NDUFA4L2Q9NRX3 87 aa4.39□□□□□ -1.71
CTNNA1-220ENST00000520260 ZNF586Q9NXT0 402 aa4.39□□□□□ -1.71
CTNNA1-220ENST00000520260 C21orf62Q9NYP8 219 aa4.39□□□□□ -1.71
CTNNA1-220ENST00000520260 IL36BQ9NZH7 164 aa4.39□□□□□ -1.71
CTNNA1-220ENST00000520260 HSPB7Q9UBY9 170 aa4.39□□□□□ -1.71
CTNNA1-220ENST00000520260 MRPS16Q9Y3D3 137 aaKnown RBP4.39□□□□□ -1.71
CTNNA1-220ENST00000520260 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.38□□□□□ -1.71
CTNNA1-220ENST00000520260 UBE2L5PA0A1B0GUS4 154 aa4.38□□□□□ -1.71
CTNNA1-220ENST00000520260 A0A1W2PS18 150 aa4.38□□□□□ -1.71
CTNNA1-220ENST00000520260 C20orf202A1L168 122 aa4.38□□□□□ -1.71
CTNNA1-220ENST00000520260 SERF1AO75920 110 aa4.38□□□□□ -1.71
CTNNA1-220ENST00000520260 NXPH3O95157 252 aa4.38□□□□□ -1.71
CTNNA1-220ENST00000520260 NDUFB8O95169 186 aa4.38□□□□□ -1.71
CTNNA1-220ENST00000520260 MT-ND6P03923 174 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms