RNA–Protein interactions for RNA: ENST00000519587.1

SDC2-203, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-203ENST00000519587 SFT2D1Q8WV19 159 aa10.63□□□□□ -0.71
SDC2-203ENST00000519587 SLC50A1Q9BRV3 221 aa10.63□□□□□ -0.71
SDC2-203ENST00000519587 UBQLN2Q9UHD9 624 aa10.63□□□□□ -0.71
SDC2-203ENST00000519587 IZUMO1RA6ND01 250 aa10.62□□□□□ -0.71
SDC2-203ENST00000519587 ISLRO14498 428 aa10.62□□□□□ -0.71
SDC2-203ENST00000519587 MRPS12O15235 138 aaKnown RBP10.62□□□□□ -0.71
SDC2-203ENST00000519587 OR10J4P0C629 311 aa10.62□□□□□ -0.71
SDC2-203ENST00000519587 GCHFRP30047 84 aa10.62□□□□□ -0.71
SDC2-203ENST00000519587 TFPI2P48307 235 aa10.62□□□□□ -0.71
SDC2-203ENST00000519587 PSMB3P49720 205 aa10.62□□□□□ -0.71
SDC2-203ENST00000519587 CMC4P56277 68 aaPredicted RBP10.62□□□□□ -0.71
SDC2-203ENST00000519587 SAMD5Q5TGI4 173 aa10.62□□□□□ -0.71
SDC2-203ENST00000519587 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.62□□□□□ -0.71
SDC2-203ENST00000519587 GTSCR1Q86UQ5 136 aa10.62□□□□□ -0.71
SDC2-203ENST00000519587 ZNF680Q8NEM1 530 aa10.62□□□□□ -0.71
SDC2-203ENST00000519587 MBD3L1Q8WWY6 194 aa10.62□□□□□ -0.71
SDC2-203ENST00000519587 FXYD5Q96DB9 178 aa10.62□□□□□ -0.71
SDC2-203ENST00000519587 SAT2Q96F10 170 aaPredicted RBP10.62□□□□□ -0.71
SDC2-203ENST00000519587 C16orf92Q96LL3 132 aa10.62□□□□□ -0.71
SDC2-203ENST00000519587 PLA2G2EQ9NZK7 142 aa10.62□□□□□ -0.71
SDC2-203ENST00000519587 ZNF256Q9Y2P7 627 aaPredicted RBP10.62□□□□□ -0.71
SDC2-203ENST00000519587 TRBV19A0A075B6N1 114 aa10.61□□□□□ -0.71
SDC2-203ENST00000519587 K7EQG2 157 aa10.61□□□□□ -0.71
SDC2-203ENST00000519587 NBEAP1P0C6P0 100 aa10.61□□□□□ -0.71
SDC2-203ENST00000519587 PPT1P50897 306 aa10.61□□□□□ -0.71
SDC2-203ENST00000519587 PSG9Q00887 426 aa10.61□□□□□ -0.71
SDC2-203ENST00000519587 EGFEM1PQ0D2K5 195 aa10.61□□□□□ -0.71
SDC2-203ENST00000519587 SSX7Q7RTT5 188 aa10.61□□□□□ -0.71
SDC2-203ENST00000519587 WFDC3Q8IUB2 231 aa10.61□□□□□ -0.71
SDC2-203ENST00000519587 DCANP1Q8TF63 244 aa10.61□□□□□ -0.71
SDC2-203ENST00000519587 BLNKQ8WV28 456 aa10.61□□□□□ -0.71
SDC2-203ENST00000519587 AAMDCQ9H7C9 122 aa10.61□□□□□ -0.71
SDC2-203ENST00000519587 CLEC5AQ9NY25 188 aa10.61□□□□□ -0.71
SDC2-203ENST00000519587 SMAD5-AS1Q9Y6J3 95 aa10.61□□□□□ -0.71
SDC2-203ENST00000519587 NOTCH1P46531 2555 aa10.61□□□□□ -0.71
SDC2-203ENST00000519587 TRAV1-1A0A0B4J248 108 aa10.6□□□□□ -0.71
SDC2-203ENST00000519587 G3V4G9 280 aa10.6□□□□□ -0.71
SDC2-203ENST00000519587 H3BQ15 152 aa10.6□□□□□ -0.71
SDC2-203ENST00000519587 EIF3GO75821 320 aaKnown RBP eCLIP10.6□□□□□ -0.71
SDC2-203ENST00000519587 FGF8P55075 233 aaPredicted RBP10.6□□□□□ -0.71
SDC2-203ENST00000519587 ZNF767PQ75MW2 155 aa10.6□□□□□ -0.71
SDC2-203ENST00000519587 ZNF503Q96F45 646 aa10.6□□□□□ -0.71
SDC2-203ENST00000519587 ZNF586Q9NXT0 402 aa10.6□□□□□ -0.71
SDC2-203ENST00000519587 TRRAPQ9Y4A5 3859 aa10.59□□□□□ -0.71
SDC2-203ENST00000519587 BEAN1Q3B7T3 259 aa10.59□□□□□ -0.71
SDC2-203ENST00000519587 LYPD1Q8N2G4 141 aa10.59□□□□□ -0.71
SDC2-203ENST00000519587 A0A1B0GV50 99 aa10.58□□□□□ -0.72
SDC2-203ENST00000519587 H3BTX0 84 aa10.58□□□□□ -0.72
SDC2-203ENST00000519587 SOCS3O14543 225 aa10.58□□□□□ -0.72
SDC2-203ENST00000519587 IFNA1P01562 189 aa10.58□□□□□ -0.72
SDC2-203ENST00000519587 ZNF688P0C7X2 276 aa10.58□□□□□ -0.72
SDC2-203ENST00000519587 CD81P60033 236 aa10.58□□□□□ -0.72
SDC2-203ENST00000519587 RAB14P61106 215 aa10.58□□□□□ -0.72
SDC2-203ENST00000519587 FAM110AQ9BQ89 295 aa10.58□□□□□ -0.72
SDC2-203ENST00000519587 MANBALQ9NQG1 85 aa10.58□□□□□ -0.72
SDC2-203ENST00000519587 ZNF331Q9NQX6 463 aaPredicted RBP10.58□□□□□ -0.72
SDC2-203ENST00000519587 PRELID1Q9Y255 219 aa10.58□□□□□ -0.72
SDC2-203ENST00000519587 ARL2-SNX15V9GYD0 113 aa10.58□□□□□ -0.72
SDC2-203ENST00000519587 NBEAL2Q6ZNJ1 2754 aa10.57□□□□□ -0.72
SDC2-203ENST00000519587 OR11H12B2RN74 326 aa10.57□□□□□ -0.72
SDC2-203ENST00000519587 SLC17A3O00476 420 aa10.57□□□□□ -0.72
SDC2-203ENST00000519587 SNRPCP09234 159 aaKnown RBP10.57□□□□□ -0.72
SDC2-203ENST00000519587 PSMG4Q5JS54 123 aa10.57□□□□□ -0.72
SDC2-203ENST00000519587 KPRPQ5T749 579 aaPredicted RBP10.57□□□□□ -0.72
SDC2-203ENST00000519587 SUN5Q8TC36 379 aa10.57□□□□□ -0.72
SDC2-203ENST00000519587 MRPL53Q96EL3 112 aaKnown RBP10.57□□□□□ -0.72
SDC2-203ENST00000519587 C17orf77Q96MU5 243 aa10.57□□□□□ -0.72
SDC2-203ENST00000519587 NKX6-2Q9C056 277 aaPredicted RBP10.57□□□□□ -0.72
SDC2-203ENST00000519587 OTORQ9NRC9 128 aa10.57□□□□□ -0.72
SDC2-203ENST00000519587 PRKDCP78527 4128 aaKnown RBP10.56□□□□□ -0.72
SDC2-203ENST00000519587 A0A1W2PRE2 83 aa10.56□□□□□ -0.72
SDC2-203ENST00000519587 NDUFB4O95168 129 aa10.56□□□□□ -0.72
SDC2-203ENST00000519587 CSN1S1P47710 185 aa10.56□□□□□ -0.72
SDC2-203ENST00000519587 RANP62826 216 aaKnown RBP10.56□□□□□ -0.72
SDC2-203ENST00000519587 ZNF738Q8NE65 137 aa10.56□□□□□ -0.72
SDC2-203ENST00000519587 LINC00052Q96N35 136 aa10.56□□□□□ -0.72
SDC2-203ENST00000519587 Q9H3A6 140 aa10.56□□□□□ -0.72
SDC2-203ENST00000519587 MAP6D1Q9H9H5 199 aa10.56□□□□□ -0.72
SDC2-203ENST00000519587 TAGLN2P37802 199 aaKnown RBP10.55□□□□□ -0.72
SDC2-203ENST00000519587 ICAM4Q14773 271 aa10.55□□□□□ -0.72
SDC2-203ENST00000519587 PSG3Q16557 428 aa10.55□□□□□ -0.72
SDC2-203ENST00000519587 ODF3L2Q3SX64 289 aa10.55□□□□□ -0.72
SDC2-203ENST00000519587 CMTM2Q8TAZ6 248 aa10.55□□□□□ -0.72
SDC2-203ENST00000519587 PRR25Q96S07 402 aa10.55□□□□□ -0.72
SDC2-203ENST00000519587 TMPRSS5Q9H3S3 457 aa10.55□□□□□ -0.72
SDC2-203ENST00000519587 GNG13Q9P2W3 67 aa10.55□□□□□ -0.72
SDC2-203ENST00000519587 TRAV8-2A0A0B4J237 113 aa10.54□□□□□ -0.72
SDC2-203ENST00000519587 CD7P09564 240 aa10.54□□□□□ -0.72
SDC2-203ENST00000519587 DEFB131AP59861 70 aa10.54□□□□□ -0.72
SDC2-203ENST00000519587 KRTAP10-11P60412 298 aa10.54□□□□□ -0.72
SDC2-203ENST00000519587 UBE2G2P60604 165 aa10.54□□□□□ -0.72
SDC2-203ENST00000519587 FAM24BQ8N5W8 94 aa10.54□□□□□ -0.72
SDC2-203ENST00000519587 RNF182Q8N6D2 247 aa10.54□□□□□ -0.72
SDC2-203ENST00000519587 RXFP4Q8TDU9 374 aa10.54□□□□□ -0.72
SDC2-203ENST00000519587 TCEAL7Q9BRU2 100 aa10.54□□□□□ -0.72
SDC2-203ENST00000519587 FAM74A7A6NL05 159 aa10.53□□□□□ -0.72
SDC2-203ENST00000519587 NMBP08949 121 aa10.53□□□□□ -0.72
SDC2-203ENST00000519587 PMS2P11Q13670 270 aa10.53□□□□□ -0.72
SDC2-203ENST00000519587 CST9LP1Q5W188 147 aa10.53□□□□□ -0.72
SDC2-203ENST00000519587 EBLN2Q6P2I7 272 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms