RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 IGHV3-16A0A0C4DH30 117 aa3.96□□□□□ -1.78
CTNNA1-216ENST00000519489 TMEM272A0A1B0GTI8 110 aa3.96□□□□□ -1.78
CTNNA1-216ENST00000519489 GGTLC3B5MD39 225 aa3.96□□□□□ -1.78
CTNNA1-216ENST00000519489 SSX5O60225 188 aa3.96□□□□□ -1.78
CTNNA1-216ENST00000519489 FKBP6O75344 327 aa3.96□□□□□ -1.78
CTNNA1-216ENST00000519489 PGLYRP1O75594 196 aaPredicted RBP3.96□□□□□ -1.78
CTNNA1-216ENST00000519489 RLN1P04808 185 aa3.96□□□□□ -1.78
CTNNA1-216ENST00000519489 CT45A10P0DMU9 189 aa3.96□□□□□ -1.78
CTNNA1-216ENST00000519489 CXCL3P19876 107 aa3.96□□□□□ -1.78
CTNNA1-216ENST00000519489 PRDX6P30041 224 aa3.96□□□□□ -1.78
CTNNA1-216ENST00000519489 FCGR2CP31995 323 aa3.96□□□□□ -1.78
CTNNA1-216ENST00000519489 HRH1P35367 487 aa3.96□□□□□ -1.78
CTNNA1-216ENST00000519489 SNCAP37840 140 aa3.96□□□□□ -1.78
CTNNA1-216ENST00000519489 MEOX2P50222 304 aa3.96□□□□□ -1.78
CTNNA1-216ENST00000519489 CATR1Q13166 79 aa3.96□□□□□ -1.78
CTNNA1-216ENST00000519489 C2orf76Q3KRA6 126 aa3.96□□□□□ -1.78
CTNNA1-216ENST00000519489 HACD4Q5VWC8 232 aa3.96□□□□□ -1.78
CTNNA1-216ENST00000519489 CNIH2Q6PI25 160 aa3.96□□□□□ -1.78
CTNNA1-216ENST00000519489 NOXA1Q86UR1 476 aa3.96□□□□□ -1.78
CTNNA1-216ENST00000519489 ZBTB34Q8NCN2 500 aa3.96□□□□□ -1.78
CTNNA1-216ENST00000519489 OR10G4Q8NGN3 311 aa3.96□□□□□ -1.78
CTNNA1-216ENST00000519489 OR10R2Q8NGX6 335 aa3.96□□□□□ -1.78
CTNNA1-216ENST00000519489 UBE2WQ96B02 151 aa3.96□□□□□ -1.78
CTNNA1-216ENST00000519489 PYGO2Q9BRQ0 406 aa3.96□□□□□ -1.78
CTNNA1-216ENST00000519489 MED4Q9NPJ6 270 aa3.96□□□□□ -1.78
CTNNA1-216ENST00000519489 PPP1R14DQ9NXH3 145 aa3.96□□□□□ -1.78
CTNNA1-216ENST00000519489 KLK12Q9UKR0 248 aa3.96□□□□□ -1.78
CTNNA1-216ENST00000519489 URGCP-MRPS24S4R325 110 aa3.96□□□□□ -1.78
CTNNA1-216ENST00000519489 PPYP01298 95 aa3.95□□□□□ -1.78
CTNNA1-216ENST00000519489 CTXN2P0C2S0 81 aa3.95□□□□□ -1.78
CTNNA1-216ENST00000519489 DTYMKP23919 212 aa3.95□□□□□ -1.78
CTNNA1-216ENST00000519489 FXYD4P59646 89 aa3.95□□□□□ -1.78
CTNNA1-216ENST00000519489 ANXA2RQ3ZCQ2 193 aa3.95□□□□□ -1.78
CTNNA1-216ENST00000519489 KRTAP26-1Q6PEX3 210 aa3.95□□□□□ -1.78
CTNNA1-216ENST00000519489 ZBTB8BQ8NAP8 495 aaPredicted RBP3.95□□□□□ -1.78
CTNNA1-216ENST00000519489 ZNF680Q8NEM1 530 aa3.95□□□□□ -1.78
CTNNA1-216ENST00000519489 OR10P1Q8NGE3 313 aa3.95□□□□□ -1.78
CTNNA1-216ENST00000519489 TRUB1Q8WWH5 349 aaKnown RBP3.95□□□□□ -1.78
CTNNA1-216ENST00000519489 ANP32BQ92688 251 aaKnown RBP3.95□□□□□ -1.78
CTNNA1-216ENST00000519489 RMI2Q96E14 147 aa3.95□□□□□ -1.78
CTNNA1-216ENST00000519489 ACY3Q96HD9 319 aa3.95□□□□□ -1.78
CTNNA1-216ENST00000519489 LINC00477Q96M19 166 aa3.95□□□□□ -1.78
CTNNA1-216ENST00000519489 LINC00479Q96M42 142 aa3.95□□□□□ -1.78
CTNNA1-216ENST00000519489 GABARAPL1Q9H0R8 117 aa3.95□□□□□ -1.78
CTNNA1-216ENST00000519489 MRPS18AQ9NVS2 196 aaKnown RBP3.95□□□□□ -1.78
CTNNA1-216ENST00000519489 MDN1Q9NU22 5596 aa3.95□□□□□ -1.78
CTNNA1-216ENST00000519489 CORTO00230 105 aa3.94□□□□□ -1.78
CTNNA1-216ENST00000519489 SLC17A2O00624 439 aa3.94□□□□□ -1.78
CTNNA1-216ENST00000519489 PSMB9P28065 219 aa3.94□□□□□ -1.78
CTNNA1-216ENST00000519489 WNT4P56705 351 aa3.94□□□□□ -1.78
CTNNA1-216ENST00000519489 LYZP61626 148 aa3.94□□□□□ -1.78
CTNNA1-216ENST00000519489 TSPAN5P62079 268 aa3.94□□□□□ -1.78
CTNNA1-216ENST00000519489 SPCS2Q15005 226 aa3.94□□□□□ -1.78
CTNNA1-216ENST00000519489 RAB11BQ15907 218 aa3.94□□□□□ -1.78
CTNNA1-216ENST00000519489 SAMD13Q5VXD3 122 aa3.94□□□□□ -1.78
CTNNA1-216ENST00000519489 MEDAGQ5VYS4 303 aa3.94□□□□□ -1.78
CTNNA1-216ENST00000519489 ENHOQ6UWT2 76 aa3.94□□□□□ -1.78
CTNNA1-216ENST00000519489 Q6ZRP5 223 aa3.94□□□□□ -1.78
CTNNA1-216ENST00000519489 CCDC190Q86UF4 302 aa3.94□□□□□ -1.78
CTNNA1-216ENST00000519489 STPG4Q8N801 248 aa3.94□□□□□ -1.78
CTNNA1-216ENST00000519489 TMEM75Q8N9X5 138 aa3.94□□□□□ -1.78
CTNNA1-216ENST00000519489 OR4A16Q8NH70 328 aa3.94□□□□□ -1.78
CTNNA1-216ENST00000519489 NUDCD2Q8WVJ2 157 aa3.94□□□□□ -1.78
CTNNA1-216ENST00000519489 RPUSD4Q96CM3 377 aaKnown RBP3.94□□□□□ -1.78
CTNNA1-216ENST00000519489 ATP6V1G3Q96LB4 118 aa3.94□□□□□ -1.78
CTNNA1-216ENST00000519489 TSC22D3Q99576 134 aa3.94□□□□□ -1.78
CTNNA1-216ENST00000519489 SLC25A22Q9H936 323 aa3.94□□□□□ -1.78
CTNNA1-216ENST00000519489 FGF20Q9NP95 211 aaPredicted RBP3.94□□□□□ -1.78
CTNNA1-216ENST00000519489 IGLV1-50A0A075B6I6 118 aa3.93□□□□□ -1.78
CTNNA1-216ENST00000519489 IGHV1OR15-1A0A075B7D0 117 aa3.93□□□□□ -1.78
CTNNA1-216ENST00000519489 TALDO1P37837 337 aa3.93□□□□□ -1.78
CTNNA1-216ENST00000519489 GALR1P47211 349 aa3.93□□□□□ -1.78
CTNNA1-216ENST00000519489 FLOT2Q14254 428 aa3.93□□□□□ -1.78
CTNNA1-216ENST00000519489 VWC2Q2TAL6 325 aa3.93□□□□□ -1.78
CTNNA1-216ENST00000519489 MAJINQ3KP22 176 aa3.93□□□□□ -1.78
CTNNA1-216ENST00000519489 SH2D6Q7Z4S9 175 aa3.93□□□□□ -1.78
CTNNA1-216ENST00000519489 TMEM17Q86X19 198 aa3.93□□□□□ -1.78
CTNNA1-216ENST00000519489 NIT1Q86X76 327 aa3.93□□□□□ -1.78
CTNNA1-216ENST00000519489 EIF4E3Q8N5X7 224 aaKnown RBP3.93□□□□□ -1.78
CTNNA1-216ENST00000519489 PRSS3P2Q8NHM4 247 aa3.93□□□□□ -1.78
CTNNA1-216ENST00000519489 APH1BQ8WW43 257 aa3.93□□□□□ -1.78
CTNNA1-216ENST00000519489 FAM3DQ96BQ1 224 aa3.93□□□□□ -1.78
CTNNA1-216ENST00000519489 CCDC124Q96CT7 223 aaKnown RBP3.93□□□□□ -1.78
CTNNA1-216ENST00000519489 GTSF1LQ9H1H1 148 aa3.93□□□□□ -1.78
CTNNA1-216ENST00000519489 Q9UF83 564 aa3.93□□□□□ -1.78
CTNNA1-216ENST00000519489 ANXA10Q9UJ72 324 aa3.93□□□□□ -1.78
CTNNA1-216ENST00000519489 RAB21Q9UL25 225 aa3.93□□□□□ -1.78
CTNNA1-216ENST00000519489 IGHV3-64A0A075B6Q5 118 aa3.92□□□□□ -1.78
CTNNA1-216ENST00000519489 G3V2T6 193 aa3.92□□□□□ -1.78
CTNNA1-216ENST00000519489 SCGB2A1O75556 95 aa3.92□□□□□ -1.78
CTNNA1-216ENST00000519489 IGKV1-5P01602 117 aa3.92□□□□□ -1.78
CTNNA1-216ENST00000519489 NUP62P37198 522 aaPredicted RBP3.92□□□□□ -1.78
CTNNA1-216ENST00000519489 OR10A3P58181 314 aa3.92□□□□□ -1.78
CTNNA1-216ENST00000519489 COX6A2Q02221 97 aa3.92□□□□□ -1.78
CTNNA1-216ENST00000519489 BTN1A1Q13410 526 aa3.92□□□□□ -1.78
CTNNA1-216ENST00000519489 KLF9Q13886 244 aaPredicted RBP3.92□□□□□ -1.78
CTNNA1-216ENST00000519489 SLC25A29Q8N8R3 303 aa3.92□□□□□ -1.78
CTNNA1-216ENST00000519489 PHYHIPQ92561 330 aa3.92□□□□□ -1.78
CTNNA1-216ENST00000519489 MRGPRFQ96AM1 343 aa3.92□□□□□ -1.78
CTNNA1-216ENST00000519489 TMA7Q9Y2S6 64 aaKnown RBP3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms