RNA–Protein interactions for RNA: ENST00000519054.5

SKP1-205, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 654 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-205ENST00000519054 CRHP06850 196 aa0.71□□□□□ -2.3
SKP1-205ENST00000519054 CRYGAP11844 174 aa0.71□□□□□ -2.3
SKP1-205ENST00000519054 G6PCP35575 357 aa0.71□□□□□ -2.3
SKP1-205ENST00000519054 GABRA2P47869 451 aa0.71□□□□□ -2.3
SKP1-205ENST00000519054 ERHP84090 104 aaKnown RBP0.71□□□□□ -2.3
SKP1-205ENST00000519054 TNFAIP6P98066 277 aaPredicted RBP0.71□□□□□ -2.3
SKP1-205ENST00000519054 HOXC5Q00444 222 aa0.71□□□□□ -2.3
SKP1-205ENST00000519054 MLLT11Q13015 90 aaPredicted RBP0.71□□□□□ -2.3
SKP1-205ENST00000519054 MED21Q13503 144 aa0.71□□□□□ -2.3
SKP1-205ENST00000519054 PPP1R1AQ13522 171 aa0.71□□□□□ -2.3
SKP1-205ENST00000519054 PLPPR5Q32ZL2 321 aa0.71□□□□□ -2.3
SKP1-205ENST00000519054 SPRNQ5BIV9 151 aa0.71□□□□□ -2.3
SKP1-205ENST00000519054 IBA57Q5T440 356 aaKnown RBP0.71□□□□□ -2.3
SKP1-205ENST00000519054 C1orf194Q5T5A4 169 aa0.71□□□□□ -2.3
SKP1-205ENST00000519054 OR10K2Q6IF99 312 aa0.71□□□□□ -2.3
SKP1-205ENST00000519054 LINC00322Q6ZN03 302 aaPredicted RBP0.71□□□□□ -2.3
SKP1-205ENST00000519054 NAA40Q86UY6 237 aa0.71□□□□□ -2.3
SKP1-205ENST00000519054 OR51D1Q8NGF3 324 aa0.71□□□□□ -2.3
SKP1-205ENST00000519054 TSLPQ969D9 159 aa0.71□□□□□ -2.3
SKP1-205ENST00000519054 CMTM5Q96DZ9 223 aa0.71□□□□□ -2.3
SKP1-205ENST00000519054 LINC01600Q96MT4 127 aa0.71□□□□□ -2.3
SKP1-205ENST00000519054 MIEN1Q9BRT3 115 aa0.71□□□□□ -2.3
SKP1-205ENST00000519054 TMEM222Q9H0R3 208 aa0.71□□□□□ -2.3
SKP1-205ENST00000519054 DPH3P1Q9H4G8 78 aa0.71□□□□□ -2.3
SKP1-205ENST00000519054 PROK2Q9HC23 129 aa0.71□□□□□ -2.3
SKP1-205ENST00000519054 HES4Q9HCC6 221 aa0.71□□□□□ -2.3
SKP1-205ENST00000519054 SPANXB1Q9NS25 103 aaPredicted RBP0.71□□□□□ -2.3
SKP1-205ENST00000519054 BABAM2Q9NXR7 383 aa0.71□□□□□ -2.3
SKP1-205ENST00000519054 HEATR1Q9H583 2144 aaKnown RBP0.7□□□□□ -2.3
SKP1-205ENST00000519054 NBDYA0A0U1RRE5 68 aa0.7□□□□□ -2.3
SKP1-205ENST00000519054 UBE2L6O14933 153 aa0.7□□□□□ -2.3
SKP1-205ENST00000519054 LYZL6O75951 148 aa0.7□□□□□ -2.3
SKP1-205ENST00000519054 CNIH1O95406 144 aa0.7□□□□□ -2.3
SKP1-205ENST00000519054 NPYP01303 97 aa0.7□□□□□ -2.3
SKP1-205ENST00000519054 C1QCP02747 245 aa0.7□□□□□ -2.3
SKP1-205ENST00000519054 TYMSP04818 313 aa0.7□□□□□ -2.3
SKP1-205ENST00000519054 HLA-DQB2P05538 268 aa0.7□□□□□ -2.3
SKP1-205ENST00000519054 BPGMP07738 259 aa0.7□□□□□ -2.3
SKP1-205ENST00000519054 RPL27AP46776 148 aaKnown RBP0.7□□□□□ -2.3
SKP1-205ENST00000519054 REG1BP48304 166 aa0.7□□□□□ -2.3
SKP1-205ENST00000519054 RPL37AP61513 92 aaKnown RBP0.7□□□□□ -2.3
SKP1-205ENST00000519054 TBPL1P62380 186 aa0.7□□□□□ -2.3
SKP1-205ENST00000519054 BTN3A2P78410 334 aa0.7□□□□□ -2.3
SKP1-205ENST00000519054 SLC36A2Q495M3 483 aa0.7□□□□□ -2.3
SKP1-205ENST00000519054 PABPC1L2AQ5JQF8 200 aa0.7□□□□□ -2.3
SKP1-205ENST00000519054 LHFPL1Q86WI0 220 aa0.7□□□□□ -2.3
SKP1-205ENST00000519054 UMODL1-AS1Q8N2C9 162 aa0.7□□□□□ -2.3
SKP1-205ENST00000519054 Q8N402 240 aa0.7□□□□□ -2.3
SKP1-205ENST00000519054 OR1L8Q8NGR8 309 aa0.7□□□□□ -2.3
SKP1-205ENST00000519054 LHFPL5Q8TAF8 219 aa0.7□□□□□ -2.3
SKP1-205ENST00000519054 ZNF675Q8TD23 568 aa0.7□□□□□ -2.3
SKP1-205ENST00000519054 ASB17Q8WXJ9 295 aa0.7□□□□□ -2.3
SKP1-205ENST00000519054 MUCL1Q96DR8 90 aa0.7□□□□□ -2.3
SKP1-205ENST00000519054 GNPNAT1Q96EK6 184 aaPredicted RBP0.7□□□□□ -2.3
SKP1-205ENST00000519054 COX14Q96I36 57 aa0.7□□□□□ -2.3
SKP1-205ENST00000519054 ANKRD36BP1Q96IX9 119 aa0.7□□□□□ -2.3
SKP1-205ENST00000519054 NMNAT3Q96T66 252 aa0.7□□□□□ -2.3
SKP1-205ENST00000519054 CCL13Q99616 98 aa0.7□□□□□ -2.3
SKP1-205ENST00000519054 VCX3BQ9H321 246 aa0.7□□□□□ -2.3
SKP1-205ENST00000519054 MAP1LC3AQ9H492 121 aa0.7□□□□□ -2.3
SKP1-205ENST00000519054 HRASLSQ9HDD0 168 aa0.7□□□□□ -2.3
SKP1-205ENST00000519054 DYNLRB1Q9NP97 96 aa0.7□□□□□ -2.3
SKP1-205ENST00000519054 HHLA3Q9XRX5 114 aa0.7□□□□□ -2.3
SKP1-205ENST00000519054 ATP6V1DQ9Y5K8 247 aa0.7□□□□□ -2.3
SKP1-205ENST00000519054 TRAV41A0A0B4J266 112 aa0.69□□□□□ -2.3
SKP1-205ENST00000519054 RFPL4AA6NLU0 287 aa0.69□□□□□ -2.3
SKP1-205ENST00000519054 EVPLLA8MZ36 301 aa0.69□□□□□ -2.3
SKP1-205ENST00000519054 RFPL4AL1F8VTS6 287 aa0.69□□□□□ -2.3
SKP1-205ENST00000519054 H3BUX3 64 aa0.69□□□□□ -2.3
SKP1-205ENST00000519054 CXCR6O00574 342 aa0.69□□□□□ -2.3
SKP1-205ENST00000519054 COX7A2LO14548 114 aa0.69□□□□□ -2.3
SKP1-205ENST00000519054 CETN3O15182 167 aa0.69□□□□□ -2.3
SKP1-205ENST00000519054 DEFB4AO15263 64 aa0.69□□□□□ -2.3
SKP1-205ENST00000519054 PGLYRP1O75594 196 aaPredicted RBP0.69□□□□□ -2.3
SKP1-205ENST00000519054 YEATS4O95619 227 aa0.69□□□□□ -2.3
SKP1-205ENST00000519054 KRT75O95678 551 aa0.69□□□□□ -2.3
SKP1-205ENST00000519054 IFNA21P01568 189 aa0.69□□□□□ -2.3
SKP1-205ENST00000519054 IFNA17P01571 189 aa0.69□□□□□ -2.3
SKP1-205ENST00000519054 C1QAP02745 245 aa0.69□□□□□ -2.3
SKP1-205ENST00000519054 IL3P08700 152 aa0.69□□□□□ -2.3
SKP1-205ENST00000519054 DDTP30046 118 aa0.69□□□□□ -2.3
SKP1-205ENST00000519054 ALDH3A1P30838 453 aa0.69□□□□□ -2.3
SKP1-205ENST00000519054 OR4D2P58180 307 aa0.69□□□□□ -2.3
SKP1-205ENST00000519054 TPI1P60174 286 aa0.69□□□□□ -2.3
SKP1-205ENST00000519054 CNBPP62633 177 aaKnown RBP0.69□□□□□ -2.3
SKP1-205ENST00000519054 BLCAPP62952 87 aa0.69□□□□□ -2.3
SKP1-205ENST00000519054 MIAQ16674 131 aa0.69□□□□□ -2.3
SKP1-205ENST00000519054 LRRC75BQ2VPJ9 315 aa0.69□□□□□ -2.3
SKP1-205ENST00000519054 TNFAIP8L3Q5GJ75 292 aa0.69□□□□□ -2.3
SKP1-205ENST00000519054 TNFAIP8L2Q6P589 184 aaPredicted RBP0.69□□□□□ -2.3
SKP1-205ENST00000519054 FAM151BQ6UXP7 276 aa0.69□□□□□ -2.3
SKP1-205ENST00000519054 LRRC28Q86X40 367 aaPredicted RBP0.69□□□□□ -2.3
SKP1-205ENST00000519054 FAM9CQ8IZT9 166 aa0.69□□□□□ -2.3
SKP1-205ENST00000519054 UBL4BQ8N7F7 174 aa0.69□□□□□ -2.3
SKP1-205ENST00000519054 OR51T1Q8NGJ9 327 aa0.69□□□□□ -2.3
SKP1-205ENST00000519054 OR2T27Q8NH04 317 aa0.69□□□□□ -2.3
SKP1-205ENST00000519054 OR5J2Q8NH18 312 aa0.69□□□□□ -2.3
SKP1-205ENST00000519054 RAB2BQ8WUD1 216 aa0.69□□□□□ -2.3
SKP1-205ENST00000519054 LCN9Q8WX39 176 aa0.69□□□□□ -2.3
SKP1-205ENST00000519054 HDHD2Q9H0R4 259 aa0.69□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms