RNA–Protein interactions for RNA: ENST00000518839.1

TRAPPC9-205, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-205ENST00000518839 UNQ9165/PRO28630Q6UXU0 137 aa11.54□□□□□ -0.56
TRAPPC9-205ENST00000518839 REC114Q7Z4M0 266 aa11.54□□□□□ -0.56
TRAPPC9-205ENST00000518839 LINC01551Q86U37 167 aa11.54□□□□□ -0.56
TRAPPC9-205ENST00000518839 C4orf3Q8WVX3 66 aa11.54□□□□□ -0.56
TRAPPC9-205ENST00000518839 ANAPC16Q96DE5 110 aa11.54□□□□□ -0.56
TRAPPC9-205ENST00000518839 CLEC5AQ9NY25 188 aa11.54□□□□□ -0.56
TRAPPC9-205ENST00000518839 IGHV7-4-1A0A0J9YVY3 117 aa11.53□□□□□ -0.56
TRAPPC9-205ENST00000518839 CXorf65A6NEN9 183 aa11.53□□□□□ -0.56
TRAPPC9-205ENST00000518839 INAFM1C9JVW0 142 aa11.53□□□□□ -0.56
TRAPPC9-205ENST00000518839 LGALS9O00182 355 aa11.53□□□□□ -0.56
TRAPPC9-205ENST00000518839 TSPAN4O14817 238 aa11.53□□□□□ -0.56
TRAPPC9-205ENST00000518839 PPP1R2P9O14990 202 aa11.53□□□□□ -0.56
TRAPPC9-205ENST00000518839 ZNF207O43670 478 aaKnown RBP11.53□□□□□ -0.56
TRAPPC9-205ENST00000518839 TCF21O43680 179 aa11.53□□□□□ -0.56
TRAPPC9-205ENST00000518839 TCRAP04437 139 aa11.53□□□□□ -0.56
TRAPPC9-205ENST00000518839 CSN1S1P47710 185 aa11.53□□□□□ -0.56
TRAPPC9-205ENST00000518839 CENPWQ5EE01 88 aa11.53□□□□□ -0.56
TRAPPC9-205ENST00000518839 WIPF2Q8TF74 440 aaPredicted RBP11.53□□□□□ -0.56
TRAPPC9-205ENST00000518839 GLMPQ8WWB7 406 aa11.53□□□□□ -0.56
TRAPPC9-205ENST00000518839 SMIM12Q96EX1 92 aa11.53□□□□□ -0.56
TRAPPC9-205ENST00000518839 FMC1Q96HJ9 113 aa11.53□□□□□ -0.56
TRAPPC9-205ENST00000518839 KLF12Q9Y4X4 402 aa11.53□□□□□ -0.56
TRAPPC9-205ENST00000518839 SMAD5-AS1Q9Y6J3 95 aa11.53□□□□□ -0.56
TRAPPC9-205ENST00000518839 TRBV20OR9-2A0A075B6H5 130 aa11.52□□□□□ -0.57
TRAPPC9-205ENST00000518839 FBLL1A6NHQ2 334 aaKnown RBP11.52□□□□□ -0.57
TRAPPC9-205ENST00000518839 APOHP02749 345 aaPredicted RBP11.52□□□□□ -0.57
TRAPPC9-205ENST00000518839 C1QL4Q86Z23 238 aa11.52□□□□□ -0.57
TRAPPC9-205ENST00000518839 EXOC3-AS1Q8N2X6 119 aa11.52□□□□□ -0.57
TRAPPC9-205ENST00000518839 LINC01006Q8NI28 216 aa11.52□□□□□ -0.57
TRAPPC9-205ENST00000518839 ISOC2Q96AB3 205 aa11.52□□□□□ -0.57
TRAPPC9-205ENST00000518839 C17orf77Q96MU5 243 aa11.52□□□□□ -0.57
TRAPPC9-205ENST00000518839 SVEP1Q4LDE5 3571 aa11.51□□□□□ -0.57
TRAPPC9-205ENST00000518839 IGHV4OR15-8A0A075B7B6 117 aa11.51□□□□□ -0.57
TRAPPC9-205ENST00000518839 A0A087WW49 117 aa11.51□□□□□ -0.57
TRAPPC9-205ENST00000518839 TRBV6-1A0A0K0K1D8 114 aa11.51□□□□□ -0.57
TRAPPC9-205ENST00000518839 A8MWP6 167 aa11.51□□□□□ -0.57
TRAPPC9-205ENST00000518839 SLC17A3O00476 420 aa11.51□□□□□ -0.57
TRAPPC9-205ENST00000518839 CRLF1O75462 422 aa11.51□□□□□ -0.57
TRAPPC9-205ENST00000518839 GNG5P63218 68 aa11.51□□□□□ -0.57
TRAPPC9-205ENST00000518839 RNF212Q495C1 297 aa11.51□□□□□ -0.57
TRAPPC9-205ENST00000518839 SAMD13Q5VXD3 122 aa11.51□□□□□ -0.57
TRAPPC9-205ENST00000518839 TMEM88Q6PEY1 159 aa11.51□□□□□ -0.57
TRAPPC9-205ENST00000518839 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.51□□□□□ -0.57
TRAPPC9-205ENST00000518839 CBLN2Q8IUK8 224 aa11.51□□□□□ -0.57
TRAPPC9-205ENST00000518839 OCC1Q8TAD7 63 aa11.51□□□□□ -0.57
TRAPPC9-205ENST00000518839 DPF1Q92782 380 aa11.51□□□□□ -0.57
TRAPPC9-205ENST00000518839 IGF2BP2-AS1Q96M15 143 aa11.51□□□□□ -0.57
TRAPPC9-205ENST00000518839 ZNF331Q9NQX6 463 aaPredicted RBP11.51□□□□□ -0.57
TRAPPC9-205ENST00000518839 BIN3Q9NQY0 253 aa11.51□□□□□ -0.57
TRAPPC9-205ENST00000518839 SMPXQ9UHP9 88 aa11.51□□□□□ -0.57
TRAPPC9-205ENST00000518839 RPH3ALQ9UNE2 315 aa11.51□□□□□ -0.57
TRAPPC9-205ENST00000518839 CSMD1Q96PZ7 3565 aa11.51□□□□□ -0.57
TRAPPC9-205ENST00000518839 NOTCH2Q04721 2471 aa11.51□□□□□ -0.57
TRAPPC9-205ENST00000518839 ZNF469Q96JG9 3925 aaPredicted RBP11.51□□□□□ -0.57
TRAPPC9-205ENST00000518839 IGHV3-49A0A0A0MS15 119 aa11.5□□□□□ -0.57
TRAPPC9-205ENST00000518839 IGHV3-66A0A0C4DH42 116 aa11.5□□□□□ -0.57
TRAPPC9-205ENST00000518839 LINC01619G3V211 115 aa11.5□□□□□ -0.57
TRAPPC9-205ENST00000518839 KHDC1LQ5JSQ8 128 aa11.5□□□□□ -0.57
TRAPPC9-205ENST00000518839 Q71RC1 249 aaPredicted RBP11.5□□□□□ -0.57
TRAPPC9-205ENST00000518839 C15orf54Q8N8G6 183 aa11.5□□□□□ -0.57
TRAPPC9-205ENST00000518839 TMEM75Q8N9X5 138 aa11.5□□□□□ -0.57
TRAPPC9-205ENST00000518839 MRPL53Q96EL3 112 aaKnown RBP11.5□□□□□ -0.57
TRAPPC9-205ENST00000518839 MXRA5Q9NR99 2828 aa11.5□□□□□ -0.57
TRAPPC9-205ENST00000518839 IGHV3OR16-13A0A075B7E8 117 aa11.49□□□□□ -0.57
TRAPPC9-205ENST00000518839 IGHV3-74A0A0B4J1X5 117 aa11.49□□□□□ -0.57
TRAPPC9-205ENST00000518839 DIRC3C9JPN6 131 aa11.49□□□□□ -0.57
TRAPPC9-205ENST00000518839 H7BYZ3 331 aa11.49□□□□□ -0.57
TRAPPC9-205ENST00000518839 CHEK1O14757 476 aa11.49□□□□□ -0.57
TRAPPC9-205ENST00000518839 HOXD3P31249 432 aaPredicted RBP11.49□□□□□ -0.57
TRAPPC9-205ENST00000518839 TM4SF20Q53R12 229 aa11.49□□□□□ -0.57
TRAPPC9-205ENST00000518839 TCTEX1D4Q5JR98 221 aa11.49□□□□□ -0.57
TRAPPC9-205ENST00000518839 BAGE2Q86Y30 109 aa11.49□□□□□ -0.57
TRAPPC9-205ENST00000518839 RHPN1-AS1Q9BWJ2 59 aa11.49□□□□□ -0.57
TRAPPC9-205ENST00000518839 ISLRO14498 428 aa11.48□□□□□ -0.57
TRAPPC9-205ENST00000518839 GCGP01275 180 aa11.48□□□□□ -0.57
TRAPPC9-205ENST00000518839 GOLT1AQ6ZVE7 132 aa11.48□□□□□ -0.57
TRAPPC9-205ENST00000518839 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.48□□□□□ -0.57
TRAPPC9-205ENST00000518839 KLHL30-AS1Q8NEE0 82 aa11.48□□□□□ -0.57
TRAPPC9-205ENST00000518839 OR1N2Q8NGR9 330 aa11.48□□□□□ -0.57
TRAPPC9-205ENST00000518839 SFRP2Q96HF1 295 aa11.48□□□□□ -0.57
TRAPPC9-205ENST00000518839 RNF114Q9Y508 228 aa11.48□□□□□ -0.57
TRAPPC9-205ENST00000518839 TSSC4Q9Y5U2 329 aaPredicted RBP11.48□□□□□ -0.57
TRAPPC9-205ENST00000518839 AKAP9Q99996 3911 aa11.47□□□□□ -0.57
TRAPPC9-205ENST00000518839 TRAV34A0A0B4J273 112 aa11.47□□□□□ -0.57
TRAPPC9-205ENST00000518839 A0A1B0GUS0 222 aa11.47□□□□□ -0.57
TRAPPC9-205ENST00000518839 TMEM213A2RRL7 107 aa11.47□□□□□ -0.57
TRAPPC9-205ENST00000518839 PGPEP1LA6NFU8 196 aa11.47□□□□□ -0.57
TRAPPC9-205ENST00000518839 M0QZ24 198 aa11.47□□□□□ -0.57
TRAPPC9-205ENST00000518839 KLF5Q13887 457 aaPredicted RBP11.47□□□□□ -0.57
TRAPPC9-205ENST00000518839 C8orf86Q6ZUL3 223 aa11.47□□□□□ -0.57
TRAPPC9-205ENST00000518839 OR10G8Q8NGN5 311 aa11.47□□□□□ -0.57
TRAPPC9-205ENST00000518839 LINC00479Q96M42 142 aa11.47□□□□□ -0.57
TRAPPC9-205ENST00000518839 PEMTQ9UBM1 199 aa11.47□□□□□ -0.57
TRAPPC9-205ENST00000518839 ZFP30Q9Y2G7 519 aa11.47□□□□□ -0.57
TRAPPC9-205ENST00000518839 K7EN84 100 aa11.46□□□□□ -0.57
TRAPPC9-205ENST00000518839 M0R3E3 92 aa11.46□□□□□ -0.57
TRAPPC9-205ENST00000518839 LTAP01374 205 aa11.46□□□□□ -0.57
TRAPPC9-205ENST00000518839 IGLV2-8P01709 118 aa11.46□□□□□ -0.57
TRAPPC9-205ENST00000518839 MGST1P10620 155 aaKnown RBP11.46□□□□□ -0.57
TRAPPC9-205ENST00000518839 S100PP25815 95 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms