RNA–Protein interactions for RNA: ENST00000518196.5

PABPC1-205, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 631 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-205ENST00000518196 OR51M1Q9H341 326 aa9.72□□□□□ -0.85
PABPC1-205ENST00000518196 RPRMQ9NS64 109 aa9.72□□□□□ -0.85
PABPC1-205ENST00000518196 SMAD5-AS1Q9Y6J3 95 aa9.72□□□□□ -0.85
PABPC1-205ENST00000518196 A0A087X0K7 114 aa9.71□□□□□ -0.86
PABPC1-205ENST00000518196 K7EQG2 157 aa9.71□□□□□ -0.86
PABPC1-205ENST00000518196 MRPS12O15235 138 aaKnown RBP9.71□□□□□ -0.86
PABPC1-205ENST00000518196 OR7C2O60412 319 aa9.71□□□□□ -0.86
PABPC1-205ENST00000518196 CD81P60033 236 aa9.71□□□□□ -0.86
PABPC1-205ENST00000518196 PQLC2Q6ZP29 291 aa9.71□□□□□ -0.86
PABPC1-205ENST00000518196 RPP25LQ8N5L8 163 aaKnown RBP9.71□□□□□ -0.86
PABPC1-205ENST00000518196 DCANP1Q8TF63 244 aa9.71□□□□□ -0.86
PABPC1-205ENST00000518196 TMED6Q8WW62 240 aa9.71□□□□□ -0.86
PABPC1-205ENST00000518196 FAM167A-AS1Q96KT0 104 aa9.71□□□□□ -0.86
PABPC1-205ENST00000518196 C16orf92Q96LL3 132 aa9.71□□□□□ -0.86
PABPC1-205ENST00000518196 PAXXQ9BUH6 204 aa9.71□□□□□ -0.86
PABPC1-205ENST00000518196 C19orf73Q9NVV2 129 aa9.71□□□□□ -0.86
PABPC1-205ENST00000518196 HIST1H1EP10412 219 aaKnown RBP9.7□□□□□ -0.86
PABPC1-205ENST00000518196 SNRPD3P62318 126 aaKnown RBP9.7□□□□□ -0.86
PABPC1-205ENST00000518196 KIR3DS1Q14943 382 aa9.7□□□□□ -0.86
PABPC1-205ENST00000518196 GUK1Q16774 197 aa9.7□□□□□ -0.86
PABPC1-205ENST00000518196 LCN15Q6UWW0 184 aa9.7□□□□□ -0.86
PABPC1-205ENST00000518196 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.7□□□□□ -0.86
PABPC1-205ENST00000518196 DPPA3Q6W0C5 159 aa9.7□□□□□ -0.86
PABPC1-205ENST00000518196 RAB24Q969Q5 203 aa9.7□□□□□ -0.86
PABPC1-205ENST00000518196 HRH4Q9H3N8 390 aa9.7□□□□□ -0.86
PABPC1-205ENST00000518196 CTXND1A0A1B0GTU2 59 aa9.69□□□□□ -0.86
PABPC1-205ENST00000518196 OR11H12B2RN74 326 aa9.69□□□□□ -0.86
PABPC1-205ENST00000518196 ISLRO14498 428 aa9.69□□□□□ -0.86
PABPC1-205ENST00000518196 CD7P09564 240 aa9.69□□□□□ -0.86
PABPC1-205ENST00000518196 IGLC2P0DOY2 106 aa9.69□□□□□ -0.86
PABPC1-205ENST00000518196 PYYP10082 97 aa9.69□□□□□ -0.86
PABPC1-205ENST00000518196 RAB5CP51148 216 aa9.69□□□□□ -0.86
PABPC1-205ENST00000518196 PHYHIPLQ96FC7 376 aa9.69□□□□□ -0.86
PABPC1-205ENST00000518196 FAM110AQ9BQ89 295 aa9.69□□□□□ -0.86
PABPC1-205ENST00000518196 SLC50A1Q9BRV3 221 aa9.69□□□□□ -0.86
PABPC1-205ENST00000518196 AURKAIP1Q9NWT8 199 aaPredicted RBP9.69□□□□□ -0.86
PABPC1-205ENST00000518196 MGAM2Q2M2H8 2515 aa9.68□□□□□ -0.86
PABPC1-205ENST00000518196 H3BQ15 152 aa9.68□□□□□ -0.86
PABPC1-205ENST00000518196 HMGB3O15347 200 aaKnown RBP9.68□□□□□ -0.86
PABPC1-205ENST00000518196 CXorf1O96002 111 aa9.68□□□□□ -0.86
PABPC1-205ENST00000518196 SNRPCP09234 159 aaKnown RBP9.68□□□□□ -0.86
PABPC1-205ENST00000518196 OR10J4P0C629 311 aa9.68□□□□□ -0.86
PABPC1-205ENST00000518196 NBEAP1P0C6P0 100 aa9.68□□□□□ -0.86
PABPC1-205ENST00000518196 ZNF688P0C7X2 276 aa9.68□□□□□ -0.86
PABPC1-205ENST00000518196 STAG3L2P0CL84 134 aa9.68□□□□□ -0.86
PABPC1-205ENST00000518196 STAG3L3P0CL85 134 aa9.68□□□□□ -0.86
PABPC1-205ENST00000518196 PSMB3P49720 205 aa9.68□□□□□ -0.86
PABPC1-205ENST00000518196 FAM213BQ8TBF2 198 aa9.68□□□□□ -0.86
PABPC1-205ENST00000518196 BLNKQ8WV28 456 aa9.68□□□□□ -0.86
PABPC1-205ENST00000518196 LINC00052Q96N35 136 aa9.68□□□□□ -0.86
PABPC1-205ENST00000518196 ZNF586Q9NXT0 402 aa9.68□□□□□ -0.86
PABPC1-205ENST00000518196 CLEC5AQ9NY25 188 aa9.68□□□□□ -0.86
PABPC1-205ENST00000518196 UBQLN2Q9UHD9 624 aa9.68□□□□□ -0.86
PABPC1-205ENST00000518196 TRBV19A0A075B6N1 114 aa9.67□□□□□ -0.86
PABPC1-205ENST00000518196 SOCS3O14543 225 aa9.67□□□□□ -0.86
PABPC1-205ENST00000518196 ZNF253O75346 499 aa9.67□□□□□ -0.86
PABPC1-205ENST00000518196 EIF3GO75821 320 aaKnown RBP eCLIP9.67□□□□□ -0.86
PABPC1-205ENST00000518196 PRB2P02812 416 aaPredicted RBP9.67□□□□□ -0.86
PABPC1-205ENST00000518196 ARL14EPLP0DKL9 152 aa9.67□□□□□ -0.86
PABPC1-205ENST00000518196 SULT1A2P50226 295 aa9.67□□□□□ -0.86
PABPC1-205ENST00000518196 DEFB131AP59861 70 aa9.67□□□□□ -0.86
PABPC1-205ENST00000518196 UBE2L3P68036 154 aaKnown RBP9.67□□□□□ -0.86
PABPC1-205ENST00000518196 PSG9Q00887 426 aa9.67□□□□□ -0.86
PABPC1-205ENST00000518196 PDE6HQ13956 83 aa9.67□□□□□ -0.86
PABPC1-205ENST00000518196 ZNF726P1Q15940 193 aa9.67□□□□□ -0.86
PABPC1-205ENST00000518196 PSMG4Q5JS54 123 aa9.67□□□□□ -0.86
PABPC1-205ENST00000518196 Q8N1Y9 231 aa9.67□□□□□ -0.86
PABPC1-205ENST00000518196 FAM24BQ8N5W8 94 aa9.67□□□□□ -0.86
PABPC1-205ENST00000518196 FXYD5Q96DB9 178 aa9.67□□□□□ -0.86
PABPC1-205ENST00000518196 ZNF503Q96F45 646 aa9.67□□□□□ -0.86
PABPC1-205ENST00000518196 C17orf77Q96MU5 243 aa9.67□□□□□ -0.86
PABPC1-205ENST00000518196 MAP6D1Q9H9H5 199 aa9.67□□□□□ -0.86
PABPC1-205ENST00000518196 MAP1LC3B2A6NCE7 125 aa9.66□□□□□ -0.86
PABPC1-205ENST00000518196 H3BTX0 84 aa9.66□□□□□ -0.86
PABPC1-205ENST00000518196 GCHFRP30047 84 aa9.66□□□□□ -0.86
PABPC1-205ENST00000518196 ODF3L2Q3SX64 289 aa9.66□□□□□ -0.86
PABPC1-205ENST00000518196 SAT2Q96F10 170 aaPredicted RBP9.66□□□□□ -0.86
PABPC1-205ENST00000518196 MAP1LC3BQ9GZQ8 125 aa9.66□□□□□ -0.86
PABPC1-205ENST00000518196 TUBA4BQ9H853 241 aa9.66□□□□□ -0.86
PABPC1-205ENST00000518196 ZNF331Q9NQX6 463 aaPredicted RBP9.66□□□□□ -0.86
PABPC1-205ENST00000518196 TMEM167BQ9NRX6 74 aa9.66□□□□□ -0.86
PABPC1-205ENST00000518196 TRAV8-2A0A0B4J237 113 aa9.65□□□□□ -0.86
PABPC1-205ENST00000518196 FHITP49789 147 aa9.65□□□□□ -0.86
PABPC1-205ENST00000518196 DEFA6Q01524 100 aa9.65□□□□□ -0.86
PABPC1-205ENST00000518196 IGFL4Q6B9Z1 124 aa9.65□□□□□ -0.86
PABPC1-205ENST00000518196 ALKAL2Q6UX46 152 aa9.65□□□□□ -0.86
PABPC1-205ENST00000518196 SSX7Q7RTT5 188 aa9.65□□□□□ -0.86
PABPC1-205ENST00000518196 IQCF2Q8IXL9 164 aa9.65□□□□□ -0.86
PABPC1-205ENST00000518196 DEFB125Q8N687 156 aa9.65□□□□□ -0.86
PABPC1-205ENST00000518196 SFT2D1Q8WV19 159 aa9.65□□□□□ -0.86
PABPC1-205ENST00000518196 MBD3L1Q8WWY6 194 aa9.65□□□□□ -0.86
PABPC1-205ENST00000518196 AAMDCQ9H7C9 122 aa9.65□□□□□ -0.86
PABPC1-205ENST00000518196 PRELID1Q9Y255 219 aa9.65□□□□□ -0.86
PABPC1-205ENST00000518196 TEX46H3BTG2 121 aa9.64□□□□□ -0.87
PABPC1-205ENST00000518196 K7EIL1 84 aa9.64□□□□□ -0.87
PABPC1-205ENST00000518196 SLC17A3O00476 420 aa9.64□□□□□ -0.87
PABPC1-205ENST00000518196 FGF8P55075 233 aaPredicted RBP9.64□□□□□ -0.87
PABPC1-205ENST00000518196 PSG3Q16557 428 aa9.64□□□□□ -0.87
PABPC1-205ENST00000518196 DEFB121Q5J5C9 76 aa9.64□□□□□ -0.87
PABPC1-205ENST00000518196 APRG1Q8IVJ8 170 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms