RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 K7ERU9 68 aa8.79□□□□□ -1
PCDHGA1-202ENST00000517417 IGLC2P0DOY2 106 aa8.79□□□□□ -1
PCDHGA1-202ENST00000517417 IGLC3P0DOY3 106 aa8.79□□□□□ -1
PCDHGA1-202ENST00000517417 TMEM249Q2WGJ8 235 aa8.79□□□□□ -1
PCDHGA1-202ENST00000517417 Q6ZR03 302 aa8.79□□□□□ -1
PCDHGA1-202ENST00000517417 ORMDL3Q8N138 153 aa8.79□□□□□ -1
PCDHGA1-202ENST00000517417 E7EQL1 145 aa8.78□□□□□ -1
PCDHGA1-202ENST00000517417 H0YJW9 148 aa8.78□□□□□ -1
PCDHGA1-202ENST00000517417 EFNA4P52798 201 aa8.78□□□□□ -1
PCDHGA1-202ENST00000517417 VMO1Q7Z5L0 202 aa8.78□□□□□ -1
PCDHGA1-202ENST00000517417 NUP35Q8NFH5 326 aa8.78□□□□□ -1
PCDHGA1-202ENST00000517417 C8orf46Q8TAG6 207 aa8.78□□□□□ -1
PCDHGA1-202ENST00000517417 C11orf52Q96A22 123 aa8.78□□□□□ -1
PCDHGA1-202ENST00000517417 OR11H12B2RN74 326 aa8.77□□□□□ -1
PCDHGA1-202ENST00000517417 ASPHD1Q5U4P2 390 aa8.77□□□□□ -1
PCDHGA1-202ENST00000517417 DUX4L9Q6RFH8 374 aaPredicted RBP8.77□□□□□ -1
PCDHGA1-202ENST00000517417 OR11H1Q8NG94 326 aa8.77□□□□□ -1
PCDHGA1-202ENST00000517417 OR11H2Q8NH07 326 aa8.77□□□□□ -1
PCDHGA1-202ENST00000517417 TMEM167AQ8TBQ9 72 aa8.77□□□□□ -1
PCDHGA1-202ENST00000517417 YAE1D1Q9NRH1 226 aa8.77□□□□□ -1
PCDHGA1-202ENST00000517417 ZNF256Q9Y2P7 627 aaPredicted RBP8.77□□□□□ -1
PCDHGA1-202ENST00000517417 FREM2Q5SZK8 3169 aa8.77□□□□□ -1
PCDHGA1-202ENST00000517417 TLN1Q9Y490 2541 aaKnown RBP8.77□□□□□ -1.01
PCDHGA1-202ENST00000517417 TRAV8-1A0A0A6YYK1 113 aa8.77□□□□□ -1.01
PCDHGA1-202ENST00000517417 EMP1P54849 157 aa8.77□□□□□ -1.01
PCDHGA1-202ENST00000517417 C18orf32Q8TCD1 76 aa8.77□□□□□ -1.01
PCDHGA1-202ENST00000517417 ORAOV1Q8WV07 137 aa8.77□□□□□ -1.01
PCDHGA1-202ENST00000517417 GEMIN7Q9H840 131 aaKnown RBP8.77□□□□□ -1.01
PCDHGA1-202ENST00000517417 MRPL27Q9P0M9 148 aaKnown RBP8.77□□□□□ -1.01
PCDHGA1-202ENST00000517417 GGTLC3B5MD39 225 aa8.77□□□□□ -1.01
PCDHGA1-202ENST00000517417 C15orf65H3BRN8 121 aa8.77□□□□□ -1.01
PCDHGA1-202ENST00000517417 FABP2P12104 132 aa8.77□□□□□ -1.01
PCDHGA1-202ENST00000517417 STPG4Q8N801 248 aa8.77□□□□□ -1.01
PCDHGA1-202ENST00000517417 OR4X2Q8NGF9 303 aa8.77□□□□□ -1.01
PCDHGA1-202ENST00000517417 NPFFR1Q9GZQ6 430 aa8.77□□□□□ -1.01
PCDHGA1-202ENST00000517417 C2CD3Q4AC94 2353 aa8.77□□□□□ -1.01
PCDHGA1-202ENST00000517417 LGALS3P17931 250 aaKnown RBP8.77□□□□□ -1.01
PCDHGA1-202ENST00000517417 DUX3Q96PT4 197 aa8.77□□□□□ -1.01
PCDHGA1-202ENST00000517417 TMEM238LA0A1B0GVL6 79 aa8.76□□□□□ -1.01
PCDHGA1-202ENST00000517417 A6NJY4 79 aa8.76□□□□□ -1.01
PCDHGA1-202ENST00000517417 CD7P09564 240 aa8.76□□□□□ -1.01
PCDHGA1-202ENST00000517417 NUP37Q8NFH4 326 aa8.76□□□□□ -1.01
PCDHGA1-202ENST00000517417 FOXC2Q99958 501 aa8.76□□□□□ -1.01
PCDHGA1-202ENST00000517417 FRMD6-AS1P0C7T7 363 aa8.76□□□□□ -1.01
PCDHGA1-202ENST00000517417 PAX8Q06710 450 aa8.76□□□□□ -1.01
PCDHGA1-202ENST00000517417 SLAQ13239 276 aa8.76□□□□□ -1.01
PCDHGA1-202ENST00000517417 UBE2V1Q13404 147 aa8.76□□□□□ -1.01
PCDHGA1-202ENST00000517417 IGFL4Q6B9Z1 124 aa8.76□□□□□ -1.01
PCDHGA1-202ENST00000517417 SCGB3A1Q96QR1 104 aa8.76□□□□□ -1.01
PCDHGA1-202ENST00000517417 SIGLEC9Q9Y336 463 aa8.76□□□□□ -1.01
PCDHGA1-202ENST00000517417 BUB1B-PAK6H3BSN5 160 aa8.76□□□□□ -1.01
PCDHGA1-202ENST00000517417 BPESC1Q9GZL8 116 aa8.76□□□□□ -1.01
PCDHGA1-202ENST00000517417 IGKV2-40A0A087WW87 121 aaPredicted RBP8.76□□□□□ -1.01
PCDHGA1-202ENST00000517417 H3BUX3 64 aa8.76□□□□□ -1.01
PCDHGA1-202ENST00000517417 IGKV2D-40P01614 121 aaPredicted RBP8.76□□□□□ -1.01
PCDHGA1-202ENST00000517417 C5orf64Q2M2E5 130 aa8.76□□□□□ -1.01
PCDHGA1-202ENST00000517417 ZNF329Q86UD4 541 aa8.76□□□□□ -1.01
PCDHGA1-202ENST00000517417 SLC25A39Q9BZJ4 359 aaPredicted RBP8.76□□□□□ -1.01
PCDHGA1-202ENST00000517417 TNFRSF18Q9Y5U5 241 aa8.76□□□□□ -1.01
PCDHGA1-202ENST00000517417 ZNF134P52741 427 aa8.75□□□□□ -1.01
PCDHGA1-202ENST00000517417 SUMO2P61956 95 aaKnown RBP8.75□□□□□ -1.01
PCDHGA1-202ENST00000517417 Q6AWC8 147 aa8.75□□□□□ -1.01
PCDHGA1-202ENST00000517417 RASL11AQ6T310 242 aa8.75□□□□□ -1.01
PCDHGA1-202ENST00000517417 LINC01587Q99440 93 aa8.75□□□□□ -1.01
PCDHGA1-202ENST00000517417 PRSS22Q9GZN4 317 aa8.75□□□□□ -1.01
PCDHGA1-202ENST00000517417 TMEM14BQ9NUH8 114 aa8.75□□□□□ -1.01
PCDHGA1-202ENST00000517417 TRAV41A0A0B4J266 112 aa8.75□□□□□ -1.01
PCDHGA1-202ENST00000517417 hDV102S1A0JD36 115 aa8.75□□□□□ -1.01
PCDHGA1-202ENST00000517417 NDPQ00604 133 aa8.75□□□□□ -1.01
PCDHGA1-202ENST00000517417 COX11Q9Y6N1 276 aa8.75□□□□□ -1.01
PCDHGA1-202ENST00000517417 SLC50A1Q9BRV3 221 aa8.75□□□□□ -1.01
PCDHGA1-202ENST00000517417 BEX4Q9NWD9 120 aaPredicted RBP8.75□□□□□ -1.01
PCDHGA1-202ENST00000517417 MRPS16Q9Y3D3 137 aaKnown RBP8.75□□□□□ -1.01
PCDHGA1-202ENST00000517417 SOX21Q9Y651 276 aaPredicted RBP8.75□□□□□ -1.01
PCDHGA1-202ENST00000517417 P0C879 139 aa8.74□□□□□ -1.01
PCDHGA1-202ENST00000517417 MPV17L2Q567V2 206 aa8.74□□□□□ -1.01
PCDHGA1-202ENST00000517417 IGF2-ASQ6U949 168 aa8.74□□□□□ -1.01
PCDHGA1-202ENST00000517417 C11orf53Q8IXP5 236 aa8.74□□□□□ -1.01
PCDHGA1-202ENST00000517417 DEFB104AQ8WTQ1 72 aa8.74□□□□□ -1.01
PCDHGA1-202ENST00000517417 SMIM12Q96EX1 92 aa8.74□□□□□ -1.01
PCDHGA1-202ENST00000517417 ASCL2Q99929 193 aa8.74□□□□□ -1.01
PCDHGA1-202ENST00000517417 JKAMPQ9P055 326 aa8.74□□□□□ -1.01
PCDHGA1-202ENST00000517417 CEP192Q8TEP8 1941 aa8.74□□□□□ -1.01
PCDHGA1-202ENST00000517417 TMEM262E9PQX1 116 aa8.74□□□□□ -1.01
PCDHGA1-202ENST00000517417 LDLRAD2Q5SZI1 272 aa8.74□□□□□ -1.01
PCDHGA1-202ENST00000517417 ATP5L2Q7Z4Y8 100 aa8.74□□□□□ -1.01
PCDHGA1-202ENST00000517417 ST20Q9HBF5 79 aa8.74□□□□□ -1.01
PCDHGA1-202ENST00000517417 PEF1Q9UBV8 284 aaKnown RBP8.74□□□□□ -1.01
PCDHGA1-202ENST00000517417 LSM4Q9Y4Z0 139 aaKnown RBP8.74□□□□□ -1.01
PCDHGA1-202ENST00000517417 COL5A1P20908 1838 aaPredicted RBP8.74□□□□□ -1.01
PCDHGA1-202ENST00000517417 RNASE2P10153 161 aaKnown RBP8.74□□□□□ -1.01
PCDHGA1-202ENST00000517417 EVI2AP22794 236 aa8.74□□□□□ -1.01
PCDHGA1-202ENST00000517417 MEIG1Q5JSS6 88 aa8.74□□□□□ -1.01
PCDHGA1-202ENST00000517417 SMIM27A0A1W2PRY6 76 aa8.74□□□□□ -1.01
PCDHGA1-202ENST00000517417 FNDC10F2Z333 226 aa8.74□□□□□ -1.01
PCDHGA1-202ENST00000517417 K7ENP7 123 aa8.74□□□□□ -1.01
PCDHGA1-202ENST00000517417 PRR20EP86478 221 aa8.74□□□□□ -1.01
PCDHGA1-202ENST00000517417 PRR20CP86479 221 aa8.74□□□□□ -1.01
PCDHGA1-202ENST00000517417 PRR20DP86480 221 aa8.74□□□□□ -1.01
PCDHGA1-202ENST00000517417 PRR20BP86481 221 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms