RNA–Protein interactions for RNA: ENST00000515609.1

TPM3-222, Transcript of tropomyosin 3, humanhuman

TSL 3

Gene TPM3, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-222ENST00000515609 PAFAH1B2P68402 229 aa7.29□□□□□ -1.24
TPM3-222ENST00000515609 KIAA0141Q14154 515 aaPredicted RBP7.29□□□□□ -1.24
TPM3-222ENST00000515609 ADIRFQ15847 76 aa7.29□□□□□ -1.24
TPM3-222ENST00000515609 AWAT1Q58HT5 328 aa7.29□□□□□ -1.24
TPM3-222ENST00000515609 C16orf54Q6UWD8 224 aa7.29□□□□□ -1.24
TPM3-222ENST00000515609 C15orf54Q8N8G6 183 aa7.29□□□□□ -1.24
TPM3-222ENST00000515609 LINC01006Q8NI28 216 aa7.29□□□□□ -1.24
TPM3-222ENST00000515609 TUBA4BQ9H853 241 aa7.29□□□□□ -1.24
TPM3-222ENST00000515609 ZNF586Q9NXT0 402 aa7.29□□□□□ -1.24
TPM3-222ENST00000515609 SMPXQ9UHP9 88 aa7.29□□□□□ -1.24
TPM3-222ENST00000515609 KLF12Q9Y4X4 402 aa7.29□□□□□ -1.24
TPM3-222ENST00000515609 RNF114Q9Y508 228 aa7.29□□□□□ -1.24
TPM3-222ENST00000515609 TRBV6-1A0A0K0K1D8 114 aa7.28□□□□□ -1.24
TPM3-222ENST00000515609 C7orf77A4D0Y5 90 aa7.28□□□□□ -1.24
TPM3-222ENST00000515609 MRPS12O15235 138 aaKnown RBP7.28□□□□□ -1.24
TPM3-222ENST00000515609 TCRAP04437 139 aa7.28□□□□□ -1.24
TPM3-222ENST00000515609 TMEM183BQ1AE95 376 aa7.28□□□□□ -1.24
TPM3-222ENST00000515609 KLHL30-AS1Q8NEE0 82 aa7.28□□□□□ -1.24
TPM3-222ENST00000515609 OR1N2Q8NGR9 330 aa7.28□□□□□ -1.24
TPM3-222ENST00000515609 C2CD4CQ8TF44 421 aa7.28□□□□□ -1.24
TPM3-222ENST00000515609 OR5B12Q96R08 314 aa7.28□□□□□ -1.24
TPM3-222ENST00000515609 NDFIP1Q9BT67 221 aa7.28□□□□□ -1.24
TPM3-222ENST00000515609 RHPN1-AS1Q9BWJ2 59 aa7.28□□□□□ -1.24
TPM3-222ENST00000515609 ZFP30Q9Y2G7 519 aa7.28□□□□□ -1.24
TPM3-222ENST00000515609 MYO9AB2RTY4 2548 aa7.27□□□□□ -1.25
TPM3-222ENST00000515609 RBAKDNA6NC62 111 aa7.27□□□□□ -1.25
TPM3-222ENST00000515609 TSPAN4O14817 238 aa7.27□□□□□ -1.25
TPM3-222ENST00000515609 TRBV12-3P01733 135 aa7.27□□□□□ -1.25
TPM3-222ENST00000515609 HOXD3P31249 432 aaPredicted RBP7.27□□□□□ -1.25
TPM3-222ENST00000515609 RPL11P62913 178 aaKnown RBP7.27□□□□□ -1.25
TPM3-222ENST00000515609 FOXL1Q12952 345 aa7.27□□□□□ -1.25
TPM3-222ENST00000515609 SAPCD1Q5SSQ6 148 aa7.27□□□□□ -1.25
TPM3-222ENST00000515609 KCNIP4Q6PIL6 250 aa7.27□□□□□ -1.25
TPM3-222ENST00000515609 LCNL1Q6ZST4 164 aa7.27□□□□□ -1.25
TPM3-222ENST00000515609 BAGE2Q86Y30 109 aa7.27□□□□□ -1.25
TPM3-222ENST00000515609 TMEM75Q8N9X5 138 aa7.27□□□□□ -1.25
TPM3-222ENST00000515609 GLMPQ8WWB7 406 aa7.27□□□□□ -1.25
TPM3-222ENST00000515609 NRN1Q9NPD7 142 aa7.27□□□□□ -1.25
TPM3-222ENST00000515609 ZNF331Q9NQX6 463 aaPredicted RBP7.27□□□□□ -1.25
TPM3-222ENST00000515609 MLXQ9UH92 298 aa7.27□□□□□ -1.25
TPM3-222ENST00000515609 NOTCH2Q04721 2471 aa7.26□□□□□ -1.25
TPM3-222ENST00000515609 H7BYZ3 331 aa7.26□□□□□ -1.25
TPM3-222ENST00000515609 ISLRO14498 428 aa7.26□□□□□ -1.25
TPM3-222ENST00000515609 RPL23P62829 140 aaKnown RBP7.26□□□□□ -1.25
TPM3-222ENST00000515609 BTN1A1Q13410 526 aa7.26□□□□□ -1.25
TPM3-222ENST00000515609 KLF5Q13887 457 aaPredicted RBP7.26□□□□□ -1.25
TPM3-222ENST00000515609 CENPWQ5EE01 88 aa7.26□□□□□ -1.25
TPM3-222ENST00000515609 LINC01551Q86U37 167 aa7.26□□□□□ -1.25
TPM3-222ENST00000515609 OR11H1Q8NG94 326 aa7.26□□□□□ -1.25
TPM3-222ENST00000515609 C16orf92Q96LL3 132 aa7.26□□□□□ -1.25
TPM3-222ENST00000515609 IMMP2LQ96T52 175 aa7.26□□□□□ -1.25
TPM3-222ENST00000515609 IGHV4OR15-8A0A075B7B6 117 aa7.25□□□□□ -1.25
TPM3-222ENST00000515609 IGHV3OR16-8A0A075B7F1 116 aa7.25□□□□□ -1.25
TPM3-222ENST00000515609 A0A087WW49 117 aa7.25□□□□□ -1.25
TPM3-222ENST00000515609 CHEK1O14757 476 aa7.25□□□□□ -1.25
TPM3-222ENST00000515609 ZNF207O43670 478 aaKnown RBP7.25□□□□□ -1.25
TPM3-222ENST00000515609 CT45A10P0DMU9 189 aa7.25□□□□□ -1.25
TPM3-222ENST00000515609 SYNJ2BPP57105 145 aa7.25□□□□□ -1.25
TPM3-222ENST00000515609 SNRPD3P62318 126 aaKnown RBP7.25□□□□□ -1.25
TPM3-222ENST00000515609 PSG3Q16557 428 aa7.25□□□□□ -1.25
TPM3-222ENST00000515609 C10orf99Q6UWK7 81 aa7.25□□□□□ -1.25
TPM3-222ENST00000515609 UNQ9165/PRO28630Q6UXU0 137 aa7.25□□□□□ -1.25
TPM3-222ENST00000515609 NDUFA11Q86Y39 141 aa7.25□□□□□ -1.25
TPM3-222ENST00000515609 WIPF2Q8TF74 440 aaPredicted RBP7.25□□□□□ -1.25
TPM3-222ENST00000515609 DAZAP1Q96EP5 407 aaKnown RBP7.25□□□□□ -1.25
TPM3-222ENST00000515609 SFRP2Q96HF1 295 aa7.25□□□□□ -1.25
TPM3-222ENST00000515609 TRAV9-1A0A075B6T8 112 aa7.24□□□□□ -1.25
TPM3-222ENST00000515609 TRAV2A0A0B4J234 112 aa7.24□□□□□ -1.25
TPM3-222ENST00000515609 DIRC3C9JPN6 131 aa7.24□□□□□ -1.25
TPM3-222ENST00000515609 DNASE2O00115 360 aaPredicted RBP7.24□□□□□ -1.25
TPM3-222ENST00000515609 HAX1O00165 279 aa7.24□□□□□ -1.25
TPM3-222ENST00000515609 CCL24O00175 119 aa7.24□□□□□ -1.25
TPM3-222ENST00000515609 OVOL1O14753 267 aa7.24□□□□□ -1.25
TPM3-222ENST00000515609 CBLN1P23435 193 aa7.24□□□□□ -1.25
TPM3-222ENST00000515609 PROK1P58294 105 aa7.24□□□□□ -1.25
TPM3-222ENST00000515609 ERVFC1-1P60608 527 aa7.24□□□□□ -1.25
TPM3-222ENST00000515609 FLI1Q01543 452 aaPredicted RBP7.24□□□□□ -1.25
TPM3-222ENST00000515609 TM4SF20Q53R12 229 aa7.24□□□□□ -1.25
TPM3-222ENST00000515609 LCN12Q6JVE5 192 aa7.24□□□□□ -1.25
TPM3-222ENST00000515609 C8orf86Q6ZUL3 223 aa7.24□□□□□ -1.25
TPM3-222ENST00000515609 GOLT1AQ6ZVE7 132 aa7.24□□□□□ -1.25
TPM3-222ENST00000515609 Q71RC1 249 aaPredicted RBP7.24□□□□□ -1.25
TPM3-222ENST00000515609 TCF24Q7RTU0 167 aa7.24□□□□□ -1.25
TPM3-222ENST00000515609 EXOC3-AS1Q8N2X6 119 aa7.24□□□□□ -1.25
TPM3-222ENST00000515609 OR10G8Q8NGN5 311 aa7.24□□□□□ -1.25
TPM3-222ENST00000515609 OR9G4Q8NGQ1 327 aa7.24□□□□□ -1.25
TPM3-222ENST00000515609 ISOC2Q96AB3 205 aa7.24□□□□□ -1.25
TPM3-222ENST00000515609 DERL1Q9BUN8 251 aa7.24□□□□□ -1.25
TPM3-222ENST00000515609 OSTCQ9NRP0 149 aa7.24□□□□□ -1.25
TPM3-222ENST00000515609 RPH3ALQ9UNE2 315 aa7.24□□□□□ -1.25
TPM3-222ENST00000515609 LENEPQ9Y5L5 61 aa7.24□□□□□ -1.25
TPM3-222ENST00000515609 ZANQ9Y493 2812 aa7.24□□□□□ -1.25
TPM3-222ENST00000515609 TLN2Q9Y4G6 2542 aa7.24□□□□□ -1.25
TPM3-222ENST00000515609 TRAV25A0A0B4J276 109 aa7.23□□□□□ -1.25
TPM3-222ENST00000515609 IGHV3-66A0A0C4DH42 116 aa7.23□□□□□ -1.25
TPM3-222ENST00000515609 TMEM213A2RRL7 107 aa7.23□□□□□ -1.25
TPM3-222ENST00000515609 C2orf70A6NJV1 201 aa7.23□□□□□ -1.25
TPM3-222ENST00000515609 GCGP01275 180 aa7.23□□□□□ -1.25
TPM3-222ENST00000515609 LTAP01374 205 aa7.23□□□□□ -1.25
TPM3-222ENST00000515609 MGST1P10620 155 aaKnown RBP7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms