RNA–Protein interactions for RNA: ENST00000515385.1

SMAD1-215, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMAD1, Length 2,085 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-215ENST00000515385 IGKV3-15P01624 115 aa10.18□□□□□ -0.78
SMAD1-215ENST00000515385 IGHV1-2P23083 117 aa10.18□□□□□ -0.78
SMAD1-215ENST00000515385 CKS2P33552 79 aa10.18□□□□□ -0.78
SMAD1-215ENST00000515385 CCL11P51671 97 aa10.18□□□□□ -0.78
SMAD1-215ENST00000515385 C3AR1Q16581 482 aa10.18□□□□□ -0.78
SMAD1-215ENST00000515385 AMN1Q8IY45 258 aa10.18□□□□□ -0.78
SMAD1-215ENST00000515385 SAP25Q8TEE9 199 aa10.18□□□□□ -0.78
SMAD1-215ENST00000515385 MAP1LC3AQ9H492 121 aa10.18□□□□□ -0.78
SMAD1-215ENST00000515385 CCL4P13236 92 aa10.17□□□□□ -0.78
SMAD1-215ENST00000515385 Q6ZUT4 128 aa10.17□□□□□ -0.78
SMAD1-215ENST00000515385 MRPL36Q9P0J6 103 aaKnown RBP10.17□□□□□ -0.78
SMAD1-215ENST00000515385 RPUSD1Q9UJJ7 312 aaKnown RBP10.17□□□□□ -0.78
SMAD1-215ENST00000515385 INSL3P51460 131 aa10.16□□□□□ -0.78
SMAD1-215ENST00000515385 LYZL1Q6UWQ5 148 aa10.16□□□□□ -0.78
SMAD1-215ENST00000515385 TPPP3Q9BW30 176 aa10.16□□□□□ -0.78
SMAD1-215ENST00000515385 NXT2Q9NPJ8 142 aaKnown RBP10.16□□□□□ -0.78
SMAD1-215ENST00000515385 ZNF71Q9NQZ8 489 aaPredicted RBP10.16□□□□□ -0.78
SMAD1-215ENST00000515385 IGHV3OR15-7A0A075B7D8 119 aa10.16□□□□□ -0.78
SMAD1-215ENST00000515385 PRSS1P07477 247 aa10.16□□□□□ -0.78
SMAD1-215ENST00000515385 TMEM178AQ8NBL3 297 aa10.16□□□□□ -0.78
SMAD1-215ENST00000515385 TMEM158Q8WZ71 300 aa10.16□□□□□ -0.78
SMAD1-215ENST00000515385 CGB1A6NKQ9 187 aa10.15□□□□□ -0.78
SMAD1-215ENST00000515385 HES3Q5TGS1 186 aa10.15□□□□□ -0.78
SMAD1-215ENST00000515385 CFAP126Q5VTH2 177 aa10.15□□□□□ -0.78
SMAD1-215ENST00000515385 AMTNQ6UX39 209 aa10.15□□□□□ -0.78
SMAD1-215ENST00000515385 OR4C13Q8NGP0 309 aa10.15□□□□□ -0.78
SMAD1-215ENST00000515385 DLX4Q92988 240 aaPredicted RBP10.15□□□□□ -0.78
SMAD1-215ENST00000515385 HIST1H4GQ99525 98 aa10.15□□□□□ -0.78
SMAD1-215ENST00000515385 A0A087WX48 190 aa10.14□□□□□ -0.79
SMAD1-215ENST00000515385 GAGE12JA6NER3 117 aa10.14□□□□□ -0.79
SMAD1-215ENST00000515385 E7EUB6 86 aa10.14□□□□□ -0.79
SMAD1-215ENST00000515385 GAGE7O76087 117 aa10.14□□□□□ -0.79
SMAD1-215ENST00000515385 LHBP01229 141 aa10.14□□□□□ -0.79
SMAD1-215ENST00000515385 NPYP01303 97 aa10.14□□□□□ -0.79
SMAD1-215ENST00000515385 GAGE12FP0CL80 117 aa10.14□□□□□ -0.79
SMAD1-215ENST00000515385 GAGE12GP0CL81 117 aa10.14□□□□□ -0.79
SMAD1-215ENST00000515385 GAGE12IP0CL82 117 aa10.14□□□□□ -0.79
SMAD1-215ENST00000515385 GAGE4Q13068 117 aa10.14□□□□□ -0.79
SMAD1-215ENST00000515385 ZC2HC1BQ5TFG8 222 aa10.14□□□□□ -0.79
SMAD1-215ENST00000515385 GTSCR1Q86UQ5 136 aa10.14□□□□□ -0.79
SMAD1-215ENST00000515385 C1orf162Q8NEQ5 155 aaPredicted RBP10.14□□□□□ -0.79
SMAD1-215ENST00000515385 PPDPFLQ8WWR9 84 aa10.14□□□□□ -0.79
SMAD1-215ENST00000515385 TMEM213A2RRL7 107 aa10.14□□□□□ -0.79
SMAD1-215ENST00000515385 C16orf97H3BN30 126 aa10.14□□□□□ -0.79
SMAD1-215ENST00000515385 H3BTX0 84 aa10.14□□□□□ -0.79
SMAD1-215ENST00000515385 NTN3O00634 580 aaPredicted RBP10.14□□□□□ -0.79
SMAD1-215ENST00000515385 LYZL6O75951 148 aa10.14□□□□□ -0.79
SMAD1-215ENST00000515385 IGHV3-48P01763 117 aa10.14□□□□□ -0.79
SMAD1-215ENST00000515385 MT-ATP8P03928 68 aa10.14□□□□□ -0.79
SMAD1-215ENST00000515385 TNFRSF1AP19438 455 aa10.14□□□□□ -0.79
SMAD1-215ENST00000515385 LEPP41159 167 aa10.14□□□□□ -0.79
SMAD1-215ENST00000515385 CRIP1P50238 77 aa10.14□□□□□ -0.79
SMAD1-215ENST00000515385 FXYD7P58549 80 aa10.14□□□□□ -0.79
SMAD1-215ENST00000515385 LYRM7Q5U5X0 104 aa10.14□□□□□ -0.79
SMAD1-215ENST00000515385 PEAR1Q5VY43 1037 aaPredicted RBP10.14□□□□□ -0.79
SMAD1-215ENST00000515385 EXOC3-AS1Q8N2X6 119 aa10.14□□□□□ -0.79
SMAD1-215ENST00000515385 MRPL20Q9BYC9 149 aaKnown RBP10.14□□□□□ -0.79
SMAD1-215ENST00000515385 VPREB3Q9UKI3 123 aa10.14□□□□□ -0.79
SMAD1-215ENST00000515385 TMEM262E9PQX1 116 aa10.13□□□□□ -0.79
SMAD1-215ENST00000515385 K7EM74 188 aa10.13□□□□□ -0.79
SMAD1-215ENST00000515385 HOXA3O43365 443 aaPredicted RBP10.13□□□□□ -0.79
SMAD1-215ENST00000515385 ZFAND6Q6FIF0 208 aa10.13□□□□□ -0.79
SMAD1-215ENST00000515385 Q6ZT83 130 aa10.13□□□□□ -0.79
SMAD1-215ENST00000515385 SCNM1Q9BWG6 230 aa10.13□□□□□ -0.79
SMAD1-215ENST00000515385 HES7Q9BYE0 225 aa10.13□□□□□ -0.79
SMAD1-215ENST00000515385 FZR1Q9UM11 496 aa10.13□□□□□ -0.79
SMAD1-215ENST00000515385 TRBV7-3A0A075B6L6 115 aa10.13□□□□□ -0.79
SMAD1-215ENST00000515385 TRBV19A0A075B6N1 114 aa10.13□□□□□ -0.79
SMAD1-215ENST00000515385 PRRG2O14669 202 aa10.13□□□□□ -0.79
SMAD1-215ENST00000515385 ATP5J2P56134 94 aa10.13□□□□□ -0.79
SMAD1-215ENST00000515385 PLGLAQ15195 96 aa10.13□□□□□ -0.79
SMAD1-215ENST00000515385 VMA21Q3ZAQ7 101 aa10.13□□□□□ -0.79
SMAD1-215ENST00000515385 TTTY13Q9BZ97 58 aa10.13□□□□□ -0.79
SMAD1-215ENST00000515385 TRAV25A0A0B4J276 109 aa10.12□□□□□ -0.79
SMAD1-215ENST00000515385 TMEM8BA6NDV4 472 aa10.12□□□□□ -0.79
SMAD1-215ENST00000515385 NCBP2LA6PVI3 153 aaKnown RBP10.12□□□□□ -0.79
SMAD1-215ENST00000515385 IL4P05112 153 aa10.12□□□□□ -0.79
SMAD1-215ENST00000515385 XGP55808 180 aa10.12□□□□□ -0.79
SMAD1-215ENST00000515385 COX8CQ7Z4L0 72 aa10.12□□□□□ -0.79
SMAD1-215ENST00000515385 PTH2Q96A98 100 aa10.12□□□□□ -0.79
SMAD1-215ENST00000515385 FOXC2Q99958 501 aa10.12□□□□□ -0.79
SMAD1-215ENST00000515385 SZT2Q5T011 3432 aa10.12□□□□□ -0.79
SMAD1-215ENST00000515385 TRANK1O15050 2925 aa10.12□□□□□ -0.79
SMAD1-215ENST00000515385 CENPVL3A0A0U1RRI6 287 aa10.11□□□□□ -0.79
SMAD1-215ENST00000515385 FABP5P3A8MUU1 101 aa10.11□□□□□ -0.79
SMAD1-215ENST00000515385 CECR9P0C854 216 aa10.11□□□□□ -0.79
SMAD1-215ENST00000515385 NGBQ9NPG2 151 aa10.11□□□□□ -0.79
SMAD1-215ENST00000515385 A0A1W2PPI3 338 aa10.11□□□□□ -0.79
SMAD1-215ENST00000515385 PLNP26678 52 aa10.11□□□□□ -0.79
SMAD1-215ENST00000515385 MEOX1P50221 254 aa10.11□□□□□ -0.79
SMAD1-215ENST00000515385 C6orf15Q6UXA7 325 aaPredicted RBP10.11□□□□□ -0.79
SMAD1-215ENST00000515385 MOGAT3Q86VF5 341 aa10.11□□□□□ -0.79
SMAD1-215ENST00000515385 WFDC3Q8IUB2 231 aa10.11□□□□□ -0.79
SMAD1-215ENST00000515385 IGLV1-44P01699 117 aa10.1□□□□□ -0.79
SMAD1-215ENST00000515385 NHLRC4P0CG21 123 aaPredicted RBP10.1□□□□□ -0.79
SMAD1-215ENST00000515385 LYZP61626 148 aa10.1□□□□□ -0.79
SMAD1-215ENST00000515385 SRSF2Q01130 221 aaKnown RBP10.1□□□□□ -0.79
SMAD1-215ENST00000515385 SIGLEC15Q6ZMC9 328 aa10.1□□□□□ -0.79
SMAD1-215ENST00000515385 TEX29Q8N6K0 151 aa10.1□□□□□ -0.79
SMAD1-215ENST00000515385 MAPKAPK5-AS1Q8N8E1 139 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms