RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 FAM122CQ6P4D5 195 aa5.67□□□□□ -1.5
HMGXB3-204ENST00000513318 LCN15Q6UWW0 184 aa5.67□□□□□ -1.5
HMGXB3-204ENST00000513318 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.67□□□□□ -1.5
HMGXB3-204ENST00000513318 PQLC2Q6ZP29 291 aa5.67□□□□□ -1.5
HMGXB3-204ENST00000513318 MIR17HGQ75NE6 70 aa5.67□□□□□ -1.5
HMGXB3-204ENST00000513318 FAM167A-AS1Q96KT0 104 aa5.67□□□□□ -1.5
HMGXB3-204ENST00000513318 SLC25A2Q9BXI2 301 aa5.67□□□□□ -1.5
HMGXB3-204ENST00000513318 RPRMQ9NS64 109 aa5.67□□□□□ -1.5
HMGXB3-204ENST00000513318 AURKAIP1Q9NWT8 199 aaPredicted RBP5.67□□□□□ -1.5
HMGXB3-204ENST00000513318 TMEM14CQ9P0S9 112 aa5.67□□□□□ -1.5
HMGXB3-204ENST00000513318 TRAV5A0A0B4J249 113 aa5.66□□□□□ -1.5
HMGXB3-204ENST00000513318 CTXND1A0A1B0GTU2 59 aa5.66□□□□□ -1.5
HMGXB3-204ENST00000513318 ISLRO14498 428 aa5.66□□□□□ -1.5
HMGXB3-204ENST00000513318 SOCS3O14543 225 aa5.66□□□□□ -1.5
HMGXB3-204ENST00000513318 ZNF253O75346 499 aa5.66□□□□□ -1.5
HMGXB3-204ENST00000513318 CD7P09564 240 aa5.66□□□□□ -1.5
HMGXB3-204ENST00000513318 STAG3L2P0CL84 134 aa5.66□□□□□ -1.5
HMGXB3-204ENST00000513318 STAG3L3P0CL85 134 aa5.66□□□□□ -1.5
HMGXB3-204ENST00000513318 IGLC2P0DOY2 106 aa5.66□□□□□ -1.5
HMGXB3-204ENST00000513318 PSMB3P49720 205 aa5.66□□□□□ -1.5
HMGXB3-204ENST00000513318 CMC4P56277 68 aaPredicted RBP5.66□□□□□ -1.5
HMGXB3-204ENST00000513318 SNRPD3P62318 126 aaKnown RBP5.66□□□□□ -1.5
HMGXB3-204ENST00000513318 PDE6HQ13956 83 aa5.66□□□□□ -1.5
HMGXB3-204ENST00000513318 GUK1Q16774 197 aa5.66□□□□□ -1.5
HMGXB3-204ENST00000513318 ODF3L2Q3SX64 289 aa5.66□□□□□ -1.5
HMGXB3-204ENST00000513318 RPP25LQ8N5L8 163 aaKnown RBP5.66□□□□□ -1.5
HMGXB3-204ENST00000513318 TMED6Q8WW62 240 aa5.66□□□□□ -1.5
HMGXB3-204ENST00000513318 C16orf92Q96LL3 132 aa5.66□□□□□ -1.5
HMGXB3-204ENST00000513318 SLC50A1Q9BRV3 221 aa5.66□□□□□ -1.5
HMGXB3-204ENST00000513318 ACTR3CQ9C0K3 210 aaPredicted RBP5.66□□□□□ -1.5
HMGXB3-204ENST00000513318 HRH4Q9H3N8 390 aa5.66□□□□□ -1.5
HMGXB3-204ENST00000513318 MAP6D1Q9H9H5 199 aa5.66□□□□□ -1.5
HMGXB3-204ENST00000513318 SMAD5-AS1Q9Y6J3 95 aa5.66□□□□□ -1.5
HMGXB3-204ENST00000513318 OR11H12B2RN74 326 aa5.65□□□□□ -1.5
HMGXB3-204ENST00000513318 ZNF688P0C7X2 276 aa5.65□□□□□ -1.5
HMGXB3-204ENST00000513318 ARL14EPLP0DKL9 152 aa5.65□□□□□ -1.5
HMGXB3-204ENST00000513318 PYYP10082 97 aa5.65□□□□□ -1.5
HMGXB3-204ENST00000513318 HIST1H1EP10412 219 aaKnown RBP5.65□□□□□ -1.5
HMGXB3-204ENST00000513318 ID1P41134 155 aa5.65□□□□□ -1.5
HMGXB3-204ENST00000513318 RAB5CP51148 216 aa5.65□□□□□ -1.5
HMGXB3-204ENST00000513318 UBE2L3P68036 154 aaKnown RBP5.65□□□□□ -1.5
HMGXB3-204ENST00000513318 DPPA3Q6W0C5 159 aa5.65□□□□□ -1.5
HMGXB3-204ENST00000513318 Q8N1Y9 231 aa5.65□□□□□ -1.5
HMGXB3-204ENST00000513318 FAM24BQ8N5W8 94 aa5.65□□□□□ -1.5
HMGXB3-204ENST00000513318 RAB24Q969Q5 203 aa5.65□□□□□ -1.5
HMGXB3-204ENST00000513318 ZNF503Q96F45 646 aa5.65□□□□□ -1.5
HMGXB3-204ENST00000513318 PHYHIPLQ96FC7 376 aa5.65□□□□□ -1.5
HMGXB3-204ENST00000513318 C17orf77Q96MU5 243 aa5.65□□□□□ -1.5
HMGXB3-204ENST00000513318 PAXXQ9BUH6 204 aa5.65□□□□□ -1.5
HMGXB3-204ENST00000513318 OR51M1Q9H341 326 aa5.65□□□□□ -1.5
HMGXB3-204ENST00000513318 ZNF586Q9NXT0 402 aa5.65□□□□□ -1.5
HMGXB3-204ENST00000513318 UBQLN2Q9UHD9 624 aa5.65□□□□□ -1.5
HMGXB3-204ENST00000513318 TRBV19A0A075B6N1 114 aa5.64□□□□□ -1.51
HMGXB3-204ENST00000513318 H3BQ15 152 aa5.64□□□□□ -1.51
HMGXB3-204ENST00000513318 HMGB3O15347 200 aaKnown RBP5.64□□□□□ -1.51
HMGXB3-204ENST00000513318 CXorf1O96002 111 aa5.64□□□□□ -1.51
HMGXB3-204ENST00000513318 PRB2P02812 416 aaPredicted RBP5.64□□□□□ -1.51
HMGXB3-204ENST00000513318 OR10J4P0C629 311 aa5.64□□□□□ -1.51
HMGXB3-204ENST00000513318 NBEAP1P0C6P0 100 aa5.64□□□□□ -1.51
HMGXB3-204ENST00000513318 DEFB131AP59861 70 aa5.64□□□□□ -1.51
HMGXB3-204ENST00000513318 DEFA6Q01524 100 aa5.64□□□□□ -1.51
HMGXB3-204ENST00000513318 ZNF726P1Q15940 193 aa5.64□□□□□ -1.51
HMGXB3-204ENST00000513318 PSMG4Q5JS54 123 aa5.64□□□□□ -1.51
HMGXB3-204ENST00000513318 LRRC20Q8TCA0 184 aa5.64□□□□□ -1.51
HMGXB3-204ENST00000513318 FXYD5Q96DB9 178 aa5.64□□□□□ -1.51
HMGXB3-204ENST00000513318 SAT2Q96F10 170 aaPredicted RBP5.64□□□□□ -1.51
HMGXB3-204ENST00000513318 WFDC10AQ9H1F0 79 aa5.64□□□□□ -1.51
HMGXB3-204ENST00000513318 ZNF331Q9NQX6 463 aaPredicted RBP5.64□□□□□ -1.51
HMGXB3-204ENST00000513318 C19orf73Q9NVV2 129 aa5.64□□□□□ -1.51
HMGXB3-204ENST00000513318 CLEC5AQ9NY25 188 aa5.64□□□□□ -1.51
HMGXB3-204ENST00000513318 MAP1LC3B2A6NCE7 125 aa5.63□□□□□ -1.51
HMGXB3-204ENST00000513318 A8MZ25 164 aa5.63□□□□□ -1.51
HMGXB3-204ENST00000513318 K7EIL1 84 aa5.63□□□□□ -1.51
HMGXB3-204ENST00000513318 SLC17A3O00476 420 aa5.63□□□□□ -1.51
HMGXB3-204ENST00000513318 EIF3GO75821 320 aaKnown RBP eCLIP5.63□□□□□ -1.51
HMGXB3-204ENST00000513318 SNRPCP09234 159 aaKnown RBP5.63□□□□□ -1.51
HMGXB3-204ENST00000513318 IGHV4-30-4P0DP06 118 aa5.63□□□□□ -1.51
HMGXB3-204ENST00000513318 GCHFRP30047 84 aa5.63□□□□□ -1.51
HMGXB3-204ENST00000513318 FHITP49789 147 aa5.63□□□□□ -1.51
HMGXB3-204ENST00000513318 SULT1A2P50226 295 aa5.63□□□□□ -1.51
HMGXB3-204ENST00000513318 PSG9Q00887 426 aa5.63□□□□□ -1.51
HMGXB3-204ENST00000513318 SSX7Q7RTT5 188 aa5.63□□□□□ -1.51
HMGXB3-204ENST00000513318 FAM213BQ8TBF2 198 aa5.63□□□□□ -1.51
HMGXB3-204ENST00000513318 MRAPQ8TCY5 172 aa5.63□□□□□ -1.51
HMGXB3-204ENST00000513318 BLNKQ8WV28 456 aa5.63□□□□□ -1.51
HMGXB3-204ENST00000513318 MAP1LC3BQ9GZQ8 125 aa5.63□□□□□ -1.51
HMGXB3-204ENST00000513318 AAMDCQ9H7C9 122 aa5.63□□□□□ -1.51
HMGXB3-204ENST00000513318 SRD5A3Q9H8P0 318 aa5.63□□□□□ -1.51
HMGXB3-204ENST00000513318 TMEM167BQ9NRX6 74 aa5.63□□□□□ -1.51
HMGXB3-204ENST00000513318 TRAV8-2A0A0B4J237 113 aa5.62□□□□□ -1.51
HMGXB3-204ENST00000513318 H3BTX0 84 aa5.62□□□□□ -1.51
HMGXB3-204ENST00000513318 NDUFB4O95168 129 aa5.62□□□□□ -1.51
HMGXB3-204ENST00000513318 PSG3Q16557 428 aa5.62□□□□□ -1.51
HMGXB3-204ENST00000513318 ALKAL2Q6UX46 152 aa5.62□□□□□ -1.51
HMGXB3-204ENST00000513318 FOXI2Q6ZQN5 318 aa5.62□□□□□ -1.51
HMGXB3-204ENST00000513318 APRG1Q8IVJ8 170 aa5.62□□□□□ -1.51
HMGXB3-204ENST00000513318 IQCF2Q8IXL9 164 aa5.62□□□□□ -1.51
HMGXB3-204ENST00000513318 LYPD1Q8N2G4 141 aa5.62□□□□□ -1.51
HMGXB3-204ENST00000513318 DEFB125Q8N687 156 aa5.62□□□□□ -1.51
HMGXB3-204ENST00000513318 RNF182Q8N6D2 247 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms