RNA–Protein interactions for RNA: ENST00000512881.5

RFC1-215, Transcript of replication factor C subunit 1, human

TSL 3

Gene RFC1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFC1-215	ENST00000512881	EBLN2	Q6P2I7	272 aa		4.91	□□□□□ -1.62
RFC1-215	ENST00000512881	TMEM182	Q6ZP80	229 aa	Predicted RBP	4.91	□□□□□ -1.62
RFC1-215	ENST00000512881	OR4B1	Q8NGF8	309 aa		4.91	□□□□□ -1.62
RFC1-215	ENST00000512881	COQ8A	Q8NI60	647 aa		4.91	□□□□□ -1.62
RFC1-215	ENST00000512881	RSG1	Q9BU20	258 aa		4.91	□□□□□ -1.62
RFC1-215	ENST00000512881	STRAP	Q9Y3F4	350 aa	Known RBP	4.91	□□□□□ -1.62
RFC1-215	ENST00000512881	PCLO	Q9Y6V0	5065 aa		4.91	□□□□□ -1.62
RFC1-215	ENST00000512881	AGRN	O00468	2067 aa		4.9	□□□□□ -1.62
RFC1-215	ENST00000512881	IGHV3OR16-12	A0A075B7B8	117 aa		4.9	□□□□□ -1.63
RFC1-215	ENST00000512881		A0A0J9YX75	114 aa		4.9	□□□□□ -1.63
RFC1-215	ENST00000512881	C9orf170	A2RU37	121 aa		4.9	□□□□□ -1.63
RFC1-215	ENST00000512881	TMEM189	A5PLL7	270 aa		4.9	□□□□□ -1.63
RFC1-215	ENST00000512881		F6UB75	175 aa		4.9	□□□□□ -1.63
RFC1-215	ENST00000512881		H3BP45	60 aa		4.9	□□□□□ -1.63
RFC1-215	ENST00000512881	ADAP1	O75689	374 aa		4.9	□□□□□ -1.63
RFC1-215	ENST00000512881	SPART-AS1	P0CW21	52 aa		4.9	□□□□□ -1.63
RFC1-215	ENST00000512881	GALR1	P47211	349 aa		4.9	□□□□□ -1.63
RFC1-215	ENST00000512881	MEOX2	P50222	304 aa		4.9	□□□□□ -1.63
RFC1-215	ENST00000512881	PAX9	P55771	341 aa		4.9	□□□□□ -1.63
RFC1-215	ENST00000512881	UBE2M	P61081	183 aa	Known RBP	4.9	□□□□□ -1.63
RFC1-215	ENST00000512881	POLR2G	P62487	172 aa	Known RBP eCLIP	4.9	□□□□□ -1.63
RFC1-215	ENST00000512881	BAK1	Q16611	211 aa		4.9	□□□□□ -1.63
RFC1-215	ENST00000512881	SPANXN2	Q5MJ10	180 aa		4.9	□□□□□ -1.63
RFC1-215	ENST00000512881	FAM78B	Q5VT40	261 aa		4.9	□□□□□ -1.63
RFC1-215	ENST00000512881	ZNF709	Q8N972	641 aa		4.9	□□□□□ -1.63
RFC1-215	ENST00000512881	BPIFC	Q8NFQ6	507 aa		4.9	□□□□□ -1.63
RFC1-215	ENST00000512881	OR4D5	Q8NGN0	318 aa		4.9	□□□□□ -1.63
RFC1-215	ENST00000512881	C17orf77	Q96MU5	243 aa		4.9	□□□□□ -1.63
RFC1-215	ENST00000512881	TMEM147	Q9BVK8	224 aa		4.9	□□□□□ -1.63
RFC1-215	ENST00000512881	SCRT1	Q9BWW7	348 aa		4.9	□□□□□ -1.63
RFC1-215	ENST00000512881	SRR	Q9GZT4	340 aa		4.9	□□□□□ -1.63
RFC1-215	ENST00000512881	SLC35B3	Q9H1N7	401 aa		4.9	□□□□□ -1.63
RFC1-215	ENST00000512881	SLC25A32	Q9H2D1	315 aa		4.9	□□□□□ -1.63
RFC1-215	ENST00000512881	SLC25A22	Q9H936	323 aa		4.9	□□□□□ -1.63
RFC1-215	ENST00000512881	RPRM	Q9NS64	109 aa		4.9	□□□□□ -1.63
RFC1-215	ENST00000512881	FLVCR2	Q9UPI3	526 aa		4.9	□□□□□ -1.63
RFC1-215	ENST00000512881	RFNG	Q9Y644	331 aa		4.9	□□□□□ -1.63
RFC1-215	ENST00000512881	LINC00854	A0A1B0GVQ3	168 aa		4.89	□□□□□ -1.63
RFC1-215	ENST00000512881	SMCO3	A2RU48	225 aa		4.89	□□□□□ -1.63
RFC1-215	ENST00000512881	NAP1L6	A6NFF2	107 aa		4.89	□□□□□ -1.63
RFC1-215	ENST00000512881	ZNF701	M0R085	212 aa	Predicted RBP	4.89	□□□□□ -1.63
RFC1-215	ENST00000512881	NDUFB6	O95139	128 aa		4.89	□□□□□ -1.63
RFC1-215	ENST00000512881	SCGB1D2	O95969	90 aa		4.89	□□□□□ -1.63
RFC1-215	ENST00000512881	IFNA21	P01568	189 aa		4.89	□□□□□ -1.63
RFC1-215	ENST00000512881	AMBP	P02760	352 aa		4.89	□□□□□ -1.63
RFC1-215	ENST00000512881	OR4E1	P0C645	316 aa		4.89	□□□□□ -1.63
RFC1-215	ENST00000512881	S100A7	P31151	101 aa		4.89	□□□□□ -1.63
RFC1-215	ENST00000512881	INPP1	P49441	399 aa		4.89	□□□□□ -1.63
RFC1-215	ENST00000512881	AKR1C1	Q04828	323 aa		4.89	□□□□□ -1.63
RFC1-215	ENST00000512881	TRIQK	Q629K1	86 aa		4.89	□□□□□ -1.63
RFC1-215	ENST00000512881	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		4.89	□□□□□ -1.63
RFC1-215	ENST00000512881	ACOT7L	Q6ZUV0	252 aa		4.89	□□□□□ -1.63
RFC1-215	ENST00000512881	TMEM144	Q7Z5S9	345 aa		4.89	□□□□□ -1.63
RFC1-215	ENST00000512881	C1orf158	Q8N1D5	194 aa		4.89	□□□□□ -1.63
RFC1-215	ENST00000512881	POM121L12	Q8N7R1	296 aa		4.89	□□□□□ -1.63
RFC1-215	ENST00000512881	OR1B1	Q8NGR6	318 aa		4.89	□□□□□ -1.63
RFC1-215	ENST00000512881	SMIM8	Q96KF7	97 aa		4.89	□□□□□ -1.63
RFC1-215	ENST00000512881	GPR82	Q96P67	336 aa		4.89	□□□□□ -1.63
RFC1-215	ENST00000512881	C7orf50	Q9BRJ6	194 aa	Known RBP	4.89	□□□□□ -1.63
RFC1-215	ENST00000512881	NDUFAF3	Q9BU61	184 aa		4.89	□□□□□ -1.63
RFC1-215	ENST00000512881	RBM38	Q9H0Z9	239 aa	Known RBP	4.89	□□□□□ -1.63
RFC1-215	ENST00000512881	PSENEN	Q9NZ42	101 aa		4.89	□□□□□ -1.63
RFC1-215	ENST00000512881	DOK5	Q9P104	306 aa		4.89	□□□□□ -1.63
RFC1-215	ENST00000512881	GOLT1B	Q9Y3E0	138 aa		4.89	□□□□□ -1.63
RFC1-215	ENST00000512881	TRAV8-2	A0A0B4J237	113 aa		4.88	□□□□□ -1.63
RFC1-215	ENST00000512881	PMS2P5	A8MQ11	134 aa		4.88	□□□□□ -1.63
RFC1-215	ENST00000512881		A8MTW9	85 aa		4.88	□□□□□ -1.63
RFC1-215	ENST00000512881	SSSCA1	O60232	199 aa		4.88	□□□□□ -1.63
RFC1-215	ENST00000512881	HYPM	O75409	117 aa		4.88	□□□□□ -1.63
RFC1-215	ENST00000512881	HBE1	P02100	147 aa		4.88	□□□□□ -1.63
RFC1-215	ENST00000512881	IL5	P05113	134 aa		4.88	□□□□□ -1.63
RFC1-215	ENST00000512881		P0DMU3	169 aa		4.88	□□□□□ -1.63
RFC1-215	ENST00000512881	FAM231A	P0DMU4	169 aa		4.88	□□□□□ -1.63
RFC1-215	ENST00000512881	FAM231C	P0DMU5	169 aa		4.88	□□□□□ -1.63
RFC1-215	ENST00000512881	ANXA7	P20073	488 aa	Known RBP	4.88	□□□□□ -1.63
RFC1-215	ENST00000512881	TWIST1	Q15672	202 aa		4.88	□□□□□ -1.63
RFC1-215	ENST00000512881	FAM222A	Q5U5X8	452 aa		4.88	□□□□□ -1.63
RFC1-215	ENST00000512881	AMTN	Q6UX39	209 aa		4.88	□□□□□ -1.63
RFC1-215	ENST00000512881	CYP2G1P	Q6ZSU1	146 aa		4.88	□□□□□ -1.63
RFC1-215	ENST00000512881	NIPSNAP3B	Q9BS92	247 aa		4.88	□□□□□ -1.63
RFC1-215	ENST00000512881	SHANK2-AS3	Q9BTD1	123 aa		4.88	□□□□□ -1.63
RFC1-215	ENST00000512881	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	4.88	□□□□□ -1.63
RFC1-215	ENST00000512881	MGAT4C	Q9UBM8	478 aa		4.88	□□□□□ -1.63
RFC1-215	ENST00000512881	HIGD1A	Q9Y241	93 aa		4.88	□□□□□ -1.63
RFC1-215	ENST00000512881	TEX48	A0A1B0GUV7	120 aa		4.87	□□□□□ -1.63
RFC1-215	ENST00000512881	CENPX	A8MT69	81 aa		4.87	□□□□□ -1.63
RFC1-215	ENST00000512881		H3BRN7	92 aa		4.87	□□□□□ -1.63
RFC1-215	ENST00000512881	CCNK	O75909	580 aa		4.87	□□□□□ -1.63
RFC1-215	ENST00000512881	DUSP14	O95147	198 aa	Known RBP	4.87	□□□□□ -1.63
RFC1-215	ENST00000512881	PRM2	P04554	102 aa		4.87	□□□□□ -1.63
RFC1-215	ENST00000512881	OR5G3	P0C626	314 aa		4.87	□□□□□ -1.63
RFC1-215	ENST00000512881	CNN1	P51911	297 aa	Known RBP	4.87	□□□□□ -1.63
RFC1-215	ENST00000512881	PLP1	P60201	277 aa		4.87	□□□□□ -1.63
RFC1-215	ENST00000512881	RRAS2	P62070	204 aa	Predicted RBP	4.87	□□□□□ -1.63
RFC1-215	ENST00000512881	SELENOT	P62341	195 aa		4.87	□□□□□ -1.63
RFC1-215	ENST00000512881	DLK1	P80370	383 aa		4.87	□□□□□ -1.63
RFC1-215	ENST00000512881	FGL1	Q08830	312 aa		4.87	□□□□□ -1.63
RFC1-215	ENST00000512881	RRN3P1	Q2M238	152 aa		4.87	□□□□□ -1.63
RFC1-215	ENST00000512881	IAH1	Q2TAA2	248 aa	Predicted RBP	4.87	□□□□□ -1.63
RFC1-215	ENST00000512881	TMEM14EP	Q6UXP3	125 aa		4.87	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms