RNA–Protein interactions for RNA: ENST00000512813.5

CLCN3-208, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-208ENST00000512813 RRP15Q9Y3B9 282 aaKnown RBP5.79□□□□□ -1.48
CLCN3-208ENST00000512813 AP4S1Q9Y587 144 aa5.79□□□□□ -1.48
CLCN3-208ENST00000512813 TMEM56-RWDD3S4R434 201 aa5.79□□□□□ -1.48
CLCN3-208ENST00000512813 MUC17Q685J3 4493 aa5.78□□□□□ -1.48
CLCN3-208ENST00000512813 IGKV1D-37A0A075B6S9 117 aa5.78□□□□□ -1.48
CLCN3-208ENST00000512813 ZFP92A6NM28 416 aa5.78□□□□□ -1.48
CLCN3-208ENST00000512813 SNRPGP15A8MWD9 76 aa5.78□□□□□ -1.48
CLCN3-208ENST00000512813 J3KRW8 73 aa5.78□□□□□ -1.48
CLCN3-208ENST00000512813 GPR31O00270 319 aa5.78□□□□□ -1.48
CLCN3-208ENST00000512813 TEPPQ6URK8 271 aa5.78□□□□□ -1.48
CLCN3-208ENST00000512813 HOGA1Q86XE5 327 aa5.78□□□□□ -1.48
CLCN3-208ENST00000512813 SPACA4Q8TDM5 124 aa5.78□□□□□ -1.48
CLCN3-208ENST00000512813 TMEM170AQ8WVE7 144 aa5.78□□□□□ -1.48
CLCN3-208ENST00000512813 DNAJC30Q96LL9 226 aa5.78□□□□□ -1.48
CLCN3-208ENST00000512813 LOC100130705A0A1B0GUX0 176 aa5.77□□□□□ -1.49
CLCN3-208ENST00000512813 CASQ2O14958 399 aaPredicted RBP5.77□□□□□ -1.49
CLCN3-208ENST00000512813 ARL6IP5O75915 188 aa5.77□□□□□ -1.49
CLCN3-208ENST00000512813 IGKV1-5P01602 117 aa5.77□□□□□ -1.49
CLCN3-208ENST00000512813 FABP1P07148 127 aa5.77□□□□□ -1.49
CLCN3-208ENST00000512813 PFN1P07737 140 aaKnown RBP5.77□□□□□ -1.49
CLCN3-208ENST00000512813 HSMCR30P0CW71 290 aa5.77□□□□□ -1.49
CLCN3-208ENST00000512813 TAS2R20P59543 309 aa5.77□□□□□ -1.49
CLCN3-208ENST00000512813 KLF9Q13886 244 aaPredicted RBP5.77□□□□□ -1.49
CLCN3-208ENST00000512813 ATRAIDQ6UW56 229 aa5.77□□□□□ -1.49
CLCN3-208ENST00000512813 TMEM91Q6ZNR0 172 aa5.77□□□□□ -1.49
CLCN3-208ENST00000512813 C10orf67Q8IYJ2 551 aa5.77□□□□□ -1.49
CLCN3-208ENST00000512813 ZNF431Q8TF32 576 aaPredicted RBP5.77□□□□□ -1.49
CLCN3-208ENST00000512813 ODF3Q96PU9 254 aa5.77□□□□□ -1.49
CLCN3-208ENST00000512813 FAM107BQ9H098 131 aa5.77□□□□□ -1.49
CLCN3-208ENST00000512813 PRSS1P07477 247 aa5.76□□□□□ -1.49
CLCN3-208ENST00000512813 CLEC2LP0C7M8 214 aa5.76□□□□□ -1.49
CLCN3-208ENST00000512813 CHTF8P0CG12 524 aa5.76□□□□□ -1.49
CLCN3-208ENST00000512813 LEPP41159 167 aa5.76□□□□□ -1.49
CLCN3-208ENST00000512813 CACNG7P62955 275 aa5.76□□□□□ -1.49
CLCN3-208ENST00000512813 MEF2DQ14814 521 aa5.76□□□□□ -1.49
CLCN3-208ENST00000512813 OR10P1Q8NGE3 313 aa5.76□□□□□ -1.49
CLCN3-208ENST00000512813 OR5AP2Q8NGF4 316 aa5.76□□□□□ -1.49
CLCN3-208ENST00000512813 GTSF1Q8WW33 167 aa5.76□□□□□ -1.49
CLCN3-208ENST00000512813 DPH3Q96FX2 82 aa5.76□□□□□ -1.49
CLCN3-208ENST00000512813 C2orf50Q96LR7 162 aa5.76□□□□□ -1.49
CLCN3-208ENST00000512813 FXYD6Q9H0Q3 95 aa5.76□□□□□ -1.49
CLCN3-208ENST00000512813 HEYLQ9NQ87 328 aaPredicted RBP5.76□□□□□ -1.49
CLCN3-208ENST00000512813 IGHV1OR15-1A0A075B7D0 117 aa5.75□□□□□ -1.49
CLCN3-208ENST00000512813 LINC00854A0A1B0GVQ3 168 aa5.75□□□□□ -1.49
CLCN3-208ENST00000512813 IFITM5A6NNB3 132 aa5.75□□□□□ -1.49
CLCN3-208ENST00000512813 VAMP1P23763 118 aa5.75□□□□□ -1.49
CLCN3-208ENST00000512813 SPCS3P61009 180 aa5.75□□□□□ -1.49
CLCN3-208ENST00000512813 AARDQ4LEZ3 155 aa5.75□□□□□ -1.49
CLCN3-208ENST00000512813 PHLDA2Q53GA4 152 aa5.75□□□□□ -1.49
CLCN3-208ENST00000512813 DHRS11Q6UWP2 260 aa5.75□□□□□ -1.49
CLCN3-208ENST00000512813 TBC1D26Q86UD7 250 aa5.75□□□□□ -1.49
CLCN3-208ENST00000512813 NANOGP1Q8N7R0 232 aa5.75□□□□□ -1.49
CLCN3-208ENST00000512813 ZNF555Q8NEP9 628 aa5.75□□□□□ -1.49
CLCN3-208ENST00000512813 Q8TAT8 98 aa5.75□□□□□ -1.49
CLCN3-208ENST00000512813 GTSF1LQ9H1H1 148 aa5.75□□□□□ -1.49
CLCN3-208ENST00000512813 SDF2L1Q9HCN8 221 aa5.75□□□□□ -1.49
CLCN3-208ENST00000512813 A0A087X0K7 114 aa5.74□□□□□ -1.49
CLCN3-208ENST00000512813 C7orf71A4D174 169 aa5.74□□□□□ -1.49
CLCN3-208ENST00000512813 FABP12A6NFH5 140 aa5.74□□□□□ -1.49
CLCN3-208ENST00000512813 USP17L23D6RBM5 183 aa5.74□□□□□ -1.49
CLCN3-208ENST00000512813 SCGNO76038 276 aa5.74□□□□□ -1.49
CLCN3-208ENST00000512813 SLC25A5P05141 298 aaKnown RBP5.74□□□□□ -1.49
CLCN3-208ENST00000512813 CT45A10P0DMU9 189 aa5.74□□□□□ -1.49
CLCN3-208ENST00000512813 S100GP29377 79 aa5.74□□□□□ -1.49
CLCN3-208ENST00000512813 AKR1C2P52895 323 aa5.74□□□□□ -1.49
CLCN3-208ENST00000512813 CNBPP62633 177 aaKnown RBP5.74□□□□□ -1.49
CLCN3-208ENST00000512813 VWC2Q2TAL6 325 aa5.74□□□□□ -1.49
CLCN3-208ENST00000512813 CCDC71LQ8N9Z2 235 aa5.74□□□□□ -1.49
CLCN3-208ENST00000512813 ZNF2Q9BSG1 426 aaPredicted RBP5.74□□□□□ -1.49
CLCN3-208ENST00000512813 DIABLOQ9NR28 239 aa5.74□□□□□ -1.49
CLCN3-208ENST00000512813 EHFQ9NZC4 300 aa5.74□□□□□ -1.49
CLCN3-208ENST00000512813 TP53TG3Q9ULZ0 132 aa5.74□□□□□ -1.49
CLCN3-208ENST00000512813 TRAV4A0A0B4J268 109 aa5.73□□□□□ -1.49
CLCN3-208ENST00000512813 TEX13DA0A0J9YY54 714 aaPredicted RBP5.73□□□□□ -1.49
CLCN3-208ENST00000512813 CFDP00746 253 aaPredicted RBP5.73□□□□□ -1.49
CLCN3-208ENST00000512813 SEC11BP0C7V7 166 aa5.73□□□□□ -1.49
CLCN3-208ENST00000512813 RPL7P18124 248 aaKnown RBP5.73□□□□□ -1.49
CLCN3-208ENST00000512813 NMSQ5H8A3 153 aa5.73□□□□□ -1.49
CLCN3-208ENST00000512813 BPIFCQ8NFQ6 507 aa5.73□□□□□ -1.49
CLCN3-208ENST00000512813 OR5H2Q8NGV7 314 aa5.73□□□□□ -1.49
CLCN3-208ENST00000512813 TRGV9Q99603 122 aa5.73□□□□□ -1.49
CLCN3-208ENST00000512813 OR51M1Q9H341 326 aa5.73□□□□□ -1.49
CLCN3-208ENST00000512813 A0A0G2JRQ6 117 aa5.72□□□□□ -1.49
CLCN3-208ENST00000512813 CRYM-AS1A6NIL9 109 aa5.72□□□□□ -1.49
CLCN3-208ENST00000512813 MPDU1O75352 247 aa5.72□□□□□ -1.49
CLCN3-208ENST00000512813 GATA1P15976 413 aaPredicted RBP5.72□□□□□ -1.49
CLCN3-208ENST00000512813 S100A7P31151 101 aa5.72□□□□□ -1.49
CLCN3-208ENST00000512813 FAM219AQ8IW50 185 aa5.72□□□□□ -1.49
CLCN3-208ENST00000512813 PRR26Q8N8Z3 221 aa5.72□□□□□ -1.49
CLCN3-208ENST00000512813 LRRC20Q8TCA0 184 aa5.72□□□□□ -1.49
CLCN3-208ENST00000512813 RASL10AQ92737 203 aa5.72□□□□□ -1.49
CLCN3-208ENST00000512813 UBE2WQ96B02 151 aa5.72□□□□□ -1.49
CLCN3-208ENST00000512813 KLLNB2CW77 178 aa5.71□□□□□ -1.5
CLCN3-208ENST00000512813 PRAC2D3DTV9 90 aa5.71□□□□□ -1.5
CLCN3-208ENST00000512813 H3BRN7 92 aa5.71□□□□□ -1.5
CLCN3-208ENST00000512813 GABARAPH6UMI1 98 aa5.71□□□□□ -1.5
CLCN3-208ENST00000512813 GABARAPO95166 117 aa5.71□□□□□ -1.5
CLCN3-208ENST00000512813 OR10J4P0C629 311 aa5.71□□□□□ -1.5
CLCN3-208ENST00000512813 RFX2P48378 723 aa5.71□□□□□ -1.5
CLCN3-208ENST00000512813 DNAL1Q4LDG9 190 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms