RNA–Protein interactions for RNA: ENST00000511944.5

NR1I3-230, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-230ENST00000511944 HIST1H2BAQ96A08 127 aa6.98□□□□□ -1.29
NR1I3-230ENST00000511944 SMIM12Q96EX1 92 aa6.98□□□□□ -1.29
NR1I3-230ENST00000511944 GRAMD2BQ96HH9 432 aa6.98□□□□□ -1.29
NR1I3-230ENST00000511944 SPATA25Q9BR10 227 aa6.98□□□□□ -1.29
NR1I3-230ENST00000511944 GNB4Q9HAV0 340 aa6.98□□□□□ -1.29
NR1I3-230ENST00000511944 OTORQ9NRC9 128 aa6.98□□□□□ -1.29
NR1I3-230ENST00000511944 PRELID1Q9Y255 219 aa6.98□□□□□ -1.29
NR1I3-230ENST00000511944 YTHDF2Q9Y5A9 579 aaKnown RBP6.98□□□□□ -1.29
NR1I3-230ENST00000511944 TRAV5A0A0B4J249 113 aa6.97□□□□□ -1.29
NR1I3-230ENST00000511944 FBLL1A6NHQ2 334 aaKnown RBP6.97□□□□□ -1.29
NR1I3-230ENST00000511944 GGTLC3B5MD39 225 aa6.97□□□□□ -1.29
NR1I3-230ENST00000511944 C9JCJ5 164 aa6.97□□□□□ -1.29
NR1I3-230ENST00000511944 INAFM1C9JVW0 142 aa6.97□□□□□ -1.29
NR1I3-230ENST00000511944 APOC3P02656 99 aa6.97□□□□□ -1.29
NR1I3-230ENST00000511944 OR10J4P0C629 311 aa6.97□□□□□ -1.29
NR1I3-230ENST00000511944 PSG9Q00887 426 aa6.97□□□□□ -1.29
NR1I3-230ENST00000511944 LINC01006Q8NI28 216 aa6.97□□□□□ -1.29
NR1I3-230ENST00000511944 MXRA5Q9NR99 2828 aa6.97□□□□□ -1.29
NR1I3-230ENST00000511944 CELSR1Q9NYQ6 3014 aa6.97□□□□□ -1.29
NR1I3-230ENST00000511944 TRBV6-1A0A0K0K1D8 114 aa6.96□□□□□ -1.3
NR1I3-230ENST00000511944 PPP5D1E7EU14 171 aa6.96□□□□□ -1.3
NR1I3-230ENST00000511944 PYYP10082 97 aa6.96□□□□□ -1.3
NR1I3-230ENST00000511944 ATP5G3P48201 142 aa6.96□□□□□ -1.3
NR1I3-230ENST00000511944 TAS2R60P59551 318 aa6.96□□□□□ -1.3
NR1I3-230ENST00000511944 UBE2G2P60604 165 aa6.96□□□□□ -1.3
NR1I3-230ENST00000511944 RPEL1Q2QD12 228 aa6.96□□□□□ -1.3
NR1I3-230ENST00000511944 OR8I2Q8N0Y5 310 aa6.96□□□□□ -1.3
NR1I3-230ENST00000511944 C2CD4CQ8TF44 421 aa6.96□□□□□ -1.3
NR1I3-230ENST00000511944 MRPL53Q96EL3 112 aaKnown RBP6.96□□□□□ -1.3
NR1I3-230ENST00000511944 DUX5Q96PT3 197 aa6.96□□□□□ -1.3
NR1I3-230ENST00000511944 SMIM7Q9BQ49 75 aa6.96□□□□□ -1.3
NR1I3-230ENST00000511944 SLC50A1Q9BRV3 221 aa6.96□□□□□ -1.3
NR1I3-230ENST00000511944 PARLQ9H300 379 aa6.96□□□□□ -1.3
NR1I3-230ENST00000511944 NAT8Q9UHE5 227 aa6.96□□□□□ -1.3
NR1I3-230ENST00000511944 TLN2Q9Y4G6 2542 aa6.95□□□□□ -1.3
NR1I3-230ENST00000511944 A0A087WWC5 75 aa6.95□□□□□ -1.3
NR1I3-230ENST00000511944 HELTA6NFD8 242 aa6.95□□□□□ -1.3
NR1I3-230ENST00000511944 ZNF727A8MUV8 499 aa6.95□□□□□ -1.3
NR1I3-230ENST00000511944 H3BQ15 152 aa6.95□□□□□ -1.3
NR1I3-230ENST00000511944 TRBV12-3P01733 135 aa6.95□□□□□ -1.3
NR1I3-230ENST00000511944 IGHV3-11P01762 117 aa6.95□□□□□ -1.3
NR1I3-230ENST00000511944 TMEM241Q24JQ0 296 aa6.95□□□□□ -1.3
NR1I3-230ENST00000511944 C16orf54Q6UWD8 224 aa6.95□□□□□ -1.3
NR1I3-230ENST00000511944 CLRN3Q8NCR9 226 aa6.95□□□□□ -1.3
NR1I3-230ENST00000511944 GLMPQ8WWB7 406 aa6.95□□□□□ -1.3
NR1I3-230ENST00000511944 TVP23CQ96ET8 276 aa6.95□□□□□ -1.3
NR1I3-230ENST00000511944 ATG101Q9BSB4 218 aa6.95□□□□□ -1.3
NR1I3-230ENST00000511944 AAMDCQ9H7C9 122 aa6.95□□□□□ -1.3
NR1I3-230ENST00000511944 ZNF586Q9NXT0 402 aa6.95□□□□□ -1.3
NR1I3-230ENST00000511944 EPDR1Q9UM22 224 aa6.95□□□□□ -1.3
NR1I3-230ENST00000511944 KLF12Q9Y4X4 402 aa6.95□□□□□ -1.3
NR1I3-230ENST00000511944 TSSC4Q9Y5U2 329 aaPredicted RBP6.95□□□□□ -1.3
NR1I3-230ENST00000511944 ACANP16112 2415 aa6.94□□□□□ -1.3
NR1I3-230ENST00000511944 IGHV7-4-1A0A0J9YVY3 117 aa6.94□□□□□ -1.3
NR1I3-230ENST00000511944 LINC01619G3V211 115 aa6.94□□□□□ -1.3
NR1I3-230ENST00000511944 K7EQM0 130 aa6.94□□□□□ -1.3
NR1I3-230ENST00000511944 PEX7O00628 323 aa6.94□□□□□ -1.3
NR1I3-230ENST00000511944 EIF3GO75821 320 aaKnown RBP eCLIP6.94□□□□□ -1.3
NR1I3-230ENST00000511944 NDUFB4O95168 129 aa6.94□□□□□ -1.3
NR1I3-230ENST00000511944 CNN1P51911 297 aaKnown RBP6.94□□□□□ -1.3
NR1I3-230ENST00000511944 PROK1P58294 105 aa6.94□□□□□ -1.3
NR1I3-230ENST00000511944 FHL3Q13643 280 aa6.94□□□□□ -1.3
NR1I3-230ENST00000511944 KLF5Q13887 457 aaPredicted RBP6.94□□□□□ -1.3
NR1I3-230ENST00000511944 LEMD1Q68G75 181 aa6.94□□□□□ -1.3
NR1I3-230ENST00000511944 C10orf99Q6UWK7 81 aa6.94□□□□□ -1.3
NR1I3-230ENST00000511944 SIGLEC15Q6ZMC9 328 aa6.94□□□□□ -1.3
NR1I3-230ENST00000511944 FMC1Q96HJ9 113 aa6.94□□□□□ -1.3
NR1I3-230ENST00000511944 C20orf24Q9BUV8 137 aa6.94□□□□□ -1.3
NR1I3-230ENST00000511944 Q9H3A6 140 aa6.94□□□□□ -1.3
NR1I3-230ENST00000511944 SDF2L1Q9HCN8 221 aa6.94□□□□□ -1.3
NR1I3-230ENST00000511944 TMEM242Q9NWH2 141 aa6.94□□□□□ -1.3
NR1I3-230ENST00000511944 RBAKDNA6NC62 111 aa6.93□□□□□ -1.3
NR1I3-230ENST00000511944 PGPA6NDG6 321 aa6.93□□□□□ -1.3
NR1I3-230ENST00000511944 CXorf65A6NEN9 183 aa6.93□□□□□ -1.3
NR1I3-230ENST00000511944 SLC25A5P05141 298 aaKnown RBP6.93□□□□□ -1.3
NR1I3-230ENST00000511944 HOXD3P31249 432 aaPredicted RBP6.93□□□□□ -1.3
NR1I3-230ENST00000511944 RANP62826 216 aaKnown RBP6.93□□□□□ -1.3
NR1I3-230ENST00000511944 GUCA2BQ16661 112 aa6.93□□□□□ -1.3
NR1I3-230ENST00000511944 KRTAP19-4Q3LI73 84 aa6.93□□□□□ -1.3
NR1I3-230ENST00000511944 TCTEX1D4Q5JR98 221 aa6.93□□□□□ -1.3
NR1I3-230ENST00000511944 UNQ9165/PRO28630Q6UXU0 137 aa6.93□□□□□ -1.3
NR1I3-230ENST00000511944 TMEM75Q8N9X5 138 aa6.93□□□□□ -1.3
NR1I3-230ENST00000511944 NUDT10Q8NFP7 164 aa6.93□□□□□ -1.3
NR1I3-230ENST00000511944 CMTM2Q8TAZ6 248 aa6.93□□□□□ -1.3
NR1I3-230ENST00000511944 NUDT11Q96G61 164 aa6.93□□□□□ -1.3
NR1I3-230ENST00000511944 ZNF331Q9NQX6 463 aaPredicted RBP6.93□□□□□ -1.3
NR1I3-230ENST00000511944 BIN3Q9NQY0 253 aa6.93□□□□□ -1.3
NR1I3-230ENST00000511944 SIGLEC8Q9NYZ4 499 aa6.93□□□□□ -1.3
NR1I3-230ENST00000511944 PEMTQ9UBM1 199 aa6.93□□□□□ -1.3
NR1I3-230ENST00000511944 SMPXQ9UHP9 88 aa6.93□□□□□ -1.3
NR1I3-230ENST00000511944 ANK3Q12955 4377 aaKnown RBP6.93□□□□□ -1.3
NR1I3-230ENST00000511944 SONP18583 2426 aaKnown RBP6.92□□□□□ -1.3
NR1I3-230ENST00000511944 TRAV2A0A0B4J234 112 aa6.92□□□□□ -1.3
NR1I3-230ENST00000511944 IGHV3-35A0A0C4DH35 117 aa6.92□□□□□ -1.3
NR1I3-230ENST00000511944 M0QZ24 198 aa6.92□□□□□ -1.3
NR1I3-230ENST00000511944 TSPAN4O14817 238 aa6.92□□□□□ -1.3
NR1I3-230ENST00000511944 PPP1R2P9O14990 202 aa6.92□□□□□ -1.3
NR1I3-230ENST00000511944 TCRAP04437 139 aa6.92□□□□□ -1.3
NR1I3-230ENST00000511944 AKR1C3P42330 323 aa6.92□□□□□ -1.3
NR1I3-230ENST00000511944 RPL35P42766 123 aaKnown RBP6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms