RNA–Protein interactions for RNA: ENST00000511551.2

SCAMP1-204, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 4

Gene SCAMP1, Length 559 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-204ENST00000511551 DOHHQ9BU89 302 aa0.78□□□□□ -2.28
SCAMP1-204ENST00000511551 MRPS26Q9BYN8 205 aaKnown RBP0.78□□□□□ -2.28
SCAMP1-204ENST00000511551 EFCAB1Q9HAE3 211 aa0.78□□□□□ -2.28
SCAMP1-204ENST00000511551 CISHQ9NSE2 258 aa0.78□□□□□ -2.28
SCAMP1-204ENST00000511551 PAQR5Q9NXK6 330 aaPredicted RBP0.78□□□□□ -2.28
SCAMP1-204ENST00000511551 IL36BQ9NZH7 164 aa0.78□□□□□ -2.28
SCAMP1-204ENST00000511551 DOK5Q9P104 306 aa0.78□□□□□ -2.28
SCAMP1-204ENST00000511551 LSM5Q9Y4Y9 91 aaKnown RBP0.78□□□□□ -2.28
SCAMP1-204ENST00000511551 TIMM9Q9Y5J7 89 aa0.78□□□□□ -2.28
SCAMP1-204ENST00000511551 UNC13CQ8NB66 2214 aa0.78□□□□□ -2.28
SCAMP1-204ENST00000511551 DYNC1H1Q14204 4646 aaKnown RBP0.77□□□□□ -2.29
SCAMP1-204ENST00000511551 STARD9Q9P2P6 4700 aa0.77□□□□□ -2.29
SCAMP1-204ENST00000511551 TRGV2A0A075B6R0 118 aa0.77□□□□□ -2.29
SCAMP1-204ENST00000511551 MEIKINA0A087WXM9 373 aa0.77□□□□□ -2.29
SCAMP1-204ENST00000511551 IGKV1D-43A0A0B4J1Z2 117 aa0.77□□□□□ -2.29
SCAMP1-204ENST00000511551 TRBV10-2A0A0K0K1G8 114 aa0.77□□□□□ -2.29
SCAMP1-204ENST00000511551 MEIS3P1A6NDR6 274 aa0.77□□□□□ -2.29
SCAMP1-204ENST00000511551 TLCD2A6NGC4 264 aa0.77□□□□□ -2.29
SCAMP1-204ENST00000511551 M0R036 132 aa0.77□□□□□ -2.29
SCAMP1-204ENST00000511551 CHP2O43745 196 aa0.77□□□□□ -2.29
SCAMP1-204ENST00000511551 CREBL2O60519 120 aaPredicted RBP0.77□□□□□ -2.29
SCAMP1-204ENST00000511551 IGKV1-5P01602 117 aa0.77□□□□□ -2.29
SCAMP1-204ENST00000511551 IFNA16P05015 189 aa0.77□□□□□ -2.29
SCAMP1-204ENST00000511551 GPX1P07203 203 aa0.77□□□□□ -2.29
SCAMP1-204ENST00000511551 SERPINA6P08185 405 aa0.77□□□□□ -2.29
SCAMP1-204ENST00000511551 KCNE1P15382 129 aa0.77□□□□□ -2.29
SCAMP1-204ENST00000511551 HIST1H1TP22492 207 aaPredicted RBP0.77□□□□□ -2.29
SCAMP1-204ENST00000511551 MSNP26038 577 aaKnown RBP0.77□□□□□ -2.29
SCAMP1-204ENST00000511551 S100A7P31151 101 aa0.77□□□□□ -2.29
SCAMP1-204ENST00000511551 SULT1A1P50225 295 aa0.77□□□□□ -2.29
SCAMP1-204ENST00000511551 ZNF80P51504 273 aaPredicted RBP0.77□□□□□ -2.29
SCAMP1-204ENST00000511551 CCL20P78556 96 aa0.77□□□□□ -2.29
SCAMP1-204ENST00000511551 RGS21Q2M5E4 152 aa0.77□□□□□ -2.29
SCAMP1-204ENST00000511551 TMEM155Q4W5P6 130 aa0.77□□□□□ -2.29
SCAMP1-204ENST00000511551 C9orf64Q5T6V5 341 aa0.77□□□□□ -2.29
SCAMP1-204ENST00000511551 LPCAT4Q643R3 524 aa0.77□□□□□ -2.29
SCAMP1-204ENST00000511551 ZNF705AQ6ZN79 300 aaPredicted RBP0.77□□□□□ -2.29
SCAMP1-204ENST00000511551 LRRC25Q8N386 305 aaPredicted RBP0.77□□□□□ -2.29
SCAMP1-204ENST00000511551 OR51D1Q8NGF3 324 aa0.77□□□□□ -2.29
SCAMP1-204ENST00000511551 MRPL30Q8TCC3 161 aaKnown RBP0.77□□□□□ -2.29
SCAMP1-204ENST00000511551 MBD3L1Q8WWY6 194 aa0.77□□□□□ -2.29
SCAMP1-204ENST00000511551 KLK6Q92876 244 aa0.77□□□□□ -2.29
SCAMP1-204ENST00000511551 OR52E6Q96RD3 313 aa0.77□□□□□ -2.29
SCAMP1-204ENST00000511551 CYSTM1Q9H1C7 97 aa0.77□□□□□ -2.29
SCAMP1-204ENST00000511551 C8orf4Q9NR00 106 aa0.77□□□□□ -2.29
SCAMP1-204ENST00000511551 SYNE2Q8WXH0 6885 aaKnown RBP0.77□□□□□ -2.29
SCAMP1-204ENST00000511551 ARFGEF3Q5TH69 2177 aa0.76□□□□□ -2.29
SCAMP1-204ENST00000511551 ALPK2Q86TB3 2170 aa0.76□□□□□ -2.29
SCAMP1-204ENST00000511551 FREM3P0C091 2139 aa0.76□□□□□ -2.29
SCAMP1-204ENST00000511551 MYH3P11055 1940 aa0.76□□□□□ -2.29
SCAMP1-204ENST00000511551 TGIF2-C20orf24A0A0A6YYL0 155 aa0.76□□□□□ -2.29
SCAMP1-204ENST00000511551 TRAPPC13A5PLN9 417 aa0.76□□□□□ -2.29
SCAMP1-204ENST00000511551 IBA57-AS1B1ANH7 110 aa0.76□□□□□ -2.29
SCAMP1-204ENST00000511551 F8W036 122 aa0.76□□□□□ -2.29
SCAMP1-204ENST00000511551 NOS1APO75052 506 aaPredicted RBP0.76□□□□□ -2.29
SCAMP1-204ENST00000511551 SULT1A3P0DMM9 295 aa0.76□□□□□ -2.29
SCAMP1-204ENST00000511551 SULT1A4P0DMN0 295 aa0.76□□□□□ -2.29
SCAMP1-204ENST00000511551 G6PCP35575 357 aa0.76□□□□□ -2.29
SCAMP1-204ENST00000511551 SPCS3P61009 180 aa0.76□□□□□ -2.29
SCAMP1-204ENST00000511551 SNRPD2P62316 118 aaKnown RBP0.76□□□□□ -2.29
SCAMP1-204ENST00000511551 RPL18Q07020 188 aaKnown RBP0.76□□□□□ -2.29
SCAMP1-204ENST00000511551 MOGQ16653 247 aa0.76□□□□□ -2.29
SCAMP1-204ENST00000511551 ARHGAP11BQ3KRB8 267 aa0.76□□□□□ -2.29
SCAMP1-204ENST00000511551 IBA57Q5T440 356 aaKnown RBP0.76□□□□□ -2.29
SCAMP1-204ENST00000511551 C8orf74Q6P047 294 aa0.76□□□□□ -2.29
SCAMP1-204ENST00000511551 C7orf65Q6ZTY9 151 aa0.76□□□□□ -2.29
SCAMP1-204ENST00000511551 DCXRQ7Z4W1 244 aa0.76□□□□□ -2.29
SCAMP1-204ENST00000511551 TMEM86AQ8N2M4 240 aa0.76□□□□□ -2.29
SCAMP1-204ENST00000511551 C10orf126Q8N4M7 172 aa0.76□□□□□ -2.29
SCAMP1-204ENST00000511551 ACOT12Q8WYK0 555 aa0.76□□□□□ -2.29
SCAMP1-204ENST00000511551 IMP4Q96G21 291 aaKnown RBP0.76□□□□□ -2.29
SCAMP1-204ENST00000511551 WDR61Q9GZS3 305 aaKnown RBP0.76□□□□□ -2.29
SCAMP1-204ENST00000511551 CMTM6Q9NX76 183 aa0.76□□□□□ -2.29
SCAMP1-204ENST00000511551 TP73-AS1Q9UF72 201 aa0.76□□□□□ -2.29
SCAMP1-204ENST00000511551 NAT8Q9UHE5 227 aa0.76□□□□□ -2.29
SCAMP1-204ENST00000511551 LHFPL6Q9Y693 200 aa0.76□□□□□ -2.29
SCAMP1-204ENST00000511551 V9GYY5 206 aaPredicted RBP0.76□□□□□ -2.29
SCAMP1-204ENST00000511551 TRBV20OR9-2A0A075B6H5 130 aa0.75□□□□□ -2.29
SCAMP1-204ENST00000511551 PQLC2LA1A4F0 135 aa0.75□□□□□ -2.29
SCAMP1-204ENST00000511551 IRGMA1A4Y4 181 aa0.75□□□□□ -2.29
SCAMP1-204ENST00000511551 GGT3PA6NGU5 568 aa0.75□□□□□ -2.29
SCAMP1-204ENST00000511551 SMIM23A6NLE4 172 aa0.75□□□□□ -2.29
SCAMP1-204ENST00000511551 PSMD12O00232 456 aaPredicted RBP0.75□□□□□ -2.29
SCAMP1-204ENST00000511551 KPNA3O00505 521 aaPredicted RBP0.75□□□□□ -2.29
SCAMP1-204ENST00000511551 PRM2P04554 102 aa0.75□□□□□ -2.29
SCAMP1-204ENST00000511551 CD79AP11912 226 aa0.75□□□□□ -2.29
SCAMP1-204ENST00000511551 NFYAP23511 347 aaPredicted RBP0.75□□□□□ -2.29
SCAMP1-204ENST00000511551 AKR1C3P42330 323 aa0.75□□□□□ -2.29
SCAMP1-204ENST00000511551 FXYD2P54710 66 aa0.75□□□□□ -2.29
SCAMP1-204ENST00000511551 MYL6P60660 151 aa0.75□□□□□ -2.29
SCAMP1-204ENST00000511551 RANP62826 216 aaKnown RBP0.75□□□□□ -2.29
SCAMP1-204ENST00000511551 SUPT4H1P63272 117 aaKnown RBP0.75□□□□□ -2.29
SCAMP1-204ENST00000511551 GRK1Q15835 563 aa0.75□□□□□ -2.29
SCAMP1-204ENST00000511551 NNATQ16517 81 aa0.75□□□□□ -2.29
SCAMP1-204ENST00000511551 Q1T7F1 81 aa0.75□□□□□ -2.29
SCAMP1-204ENST00000511551 ACOT6Q3I5F7 207 aaPredicted RBP0.75□□□□□ -2.29
SCAMP1-204ENST00000511551 CCDC122Q5T0U0 273 aa0.75□□□□□ -2.29
SCAMP1-204ENST00000511551 FAM173BQ6P4H8 233 aa0.75□□□□□ -2.29
SCAMP1-204ENST00000511551 SLC36A1Q7Z2H8 476 aa0.75□□□□□ -2.29
SCAMP1-204ENST00000511551 DHFR2Q86XF0 187 aa0.75□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms