RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 NPFFR1Q9GZQ6 430 aa6.9□□□□□ -1.3
HTT-208ENST00000510626 TMEM133Q9H2Q1 129 aa6.9□□□□□ -1.3
HTT-208ENST00000510626 TMEM14BQ9NUH8 114 aa6.9□□□□□ -1.3
HTT-208ENST00000510626 MUC4Q99102 2169 aa6.9□□□□□ -1.31
HTT-208ENST00000510626 HIGD1BQ9P298 99 aa6.9□□□□□ -1.31
HTT-208ENST00000510626 PDE6GP18545 87 aa6.9□□□□□ -1.31
HTT-208ENST00000510626 NDUFC1O43677 76 aa6.9□□□□□ -1.31
HTT-208ENST00000510626 CECR9P0C854 216 aa6.9□□□□□ -1.31
HTT-208ENST00000510626 PKIGQ9Y2B9 76 aa6.9□□□□□ -1.31
HTT-208ENST00000510626 ABCA2Q9BZC7 2435 aa6.9□□□□□ -1.31
HTT-208ENST00000510626 C18orf32Q8TCD1 76 aa6.89□□□□□ -1.31
HTT-208ENST00000510626 EREGO14944 169 aa6.89□□□□□ -1.31
HTT-208ENST00000510626 CENPVQ7Z7K6 275 aaPredicted RBP6.89□□□□□ -1.31
HTT-208ENST00000510626 RFNGQ9Y644 331 aa6.89□□□□□ -1.31
HTT-208ENST00000510626 hDV102S1A0JD36 115 aa6.89□□□□□ -1.31
HTT-208ENST00000510626 PRSS12P56730 875 aa6.89□□□□□ -1.31
HTT-208ENST00000510626 TRAV12-3A0A0B4J271 114 aa6.89□□□□□ -1.31
HTT-208ENST00000510626 CFHR1Q03591 330 aa6.89□□□□□ -1.31
HTT-208ENST00000510626 LYZL4Q96KX0 146 aa6.89□□□□□ -1.31
HTT-208ENST00000510626 ZNF138P52744 262 aa6.89□□□□□ -1.31
HTT-208ENST00000510626 GNG5P63218 68 aa6.89□□□□□ -1.31
HTT-208ENST00000510626 ZNF329Q86UD4 541 aa6.89□□□□□ -1.31
HTT-208ENST00000510626 ZNRF1Q8ND25 227 aa6.89□□□□□ -1.31
HTT-208ENST00000510626 A0A0A6YYD4 124 aa6.89□□□□□ -1.31
HTT-208ENST00000510626 LINC01587Q99440 93 aa6.89□□□□□ -1.31
HTT-208ENST00000510626 Q8N8P6 123 aa6.89□□□□□ -1.31
HTT-208ENST00000510626 MST1LQ2TV78 715 aa6.89□□□□□ -1.31
HTT-208ENST00000510626 FAM104BQ5XKR9 115 aa6.89□□□□□ -1.31
HTT-208ENST00000510626 PRADC1Q9BSG0 188 aa6.89□□□□□ -1.31
HTT-208ENST00000510626 A0A1W2PPI3 338 aa6.89□□□□□ -1.31
HTT-208ENST00000510626 ADARB2-AS1A8MUL3 147 aa6.89□□□□□ -1.31
HTT-208ENST00000510626 SPATA12Q7Z6I5 190 aa6.88□□□□□ -1.31
HTT-208ENST00000510626 RHODO00212 210 aa6.88□□□□□ -1.31
HTT-208ENST00000510626 CDK2AP2O75956 126 aa6.88□□□□□ -1.31
HTT-208ENST00000510626 SIGLEC15Q6ZMC9 328 aa6.88□□□□□ -1.31
HTT-208ENST00000510626 FOXI2Q6ZQN5 318 aa6.88□□□□□ -1.31
HTT-208ENST00000510626 SAP25Q8TEE9 199 aa6.88□□□□□ -1.31
HTT-208ENST00000510626 C3orf36Q3SXR2 165 aa6.88□□□□□ -1.31
HTT-208ENST00000510626 AZU1P20160 251 aa6.88□□□□□ -1.31
HTT-208ENST00000510626 C1QCP02747 245 aa6.88□□□□□ -1.31
HTT-208ENST00000510626 SHANK2-AS3Q9BTD1 123 aa6.88□□□□□ -1.31
HTT-208ENST00000510626 TIMM21Q9BVV7 248 aa6.88□□□□□ -1.31
HTT-208ENST00000510626 C15orf62A8K5M9 175 aa6.88□□□□□ -1.31
HTT-208ENST00000510626 LINC01565O15544 149 aa6.88□□□□□ -1.31
HTT-208ENST00000510626 TEN1Q86WV5 123 aa6.88□□□□□ -1.31
HTT-208ENST00000510626 ANKRD29Q8N6D5 301 aa6.88□□□□□ -1.31
HTT-208ENST00000510626 F8WEM9 126 aa6.88□□□□□ -1.31
HTT-208ENST00000510626 CD55P08174 381 aa6.88□□□□□ -1.31
HTT-208ENST00000510626 SPSB2Q99619 263 aa6.88□□□□□ -1.31
HTT-208ENST00000510626 LYZL1Q6UWQ5 148 aa6.88□□□□□ -1.31
HTT-208ENST00000510626 C9orf139Q6ZV77 190 aa6.88□□□□□ -1.31
HTT-208ENST00000510626 NPC2P61916 151 aa6.88□□□□□ -1.31
HTT-208ENST00000510626 Q86TA4 180 aa6.88□□□□□ -1.31
HTT-208ENST00000510626 IGKV1D-33P01593 117 aa6.88□□□□□ -1.31
HTT-208ENST00000510626 IGKV1-33P01594 117 aa6.88□□□□□ -1.31
HTT-208ENST00000510626 LCN12Q6JVE5 192 aa6.88□□□□□ -1.31
HTT-208ENST00000510626 PYGO2Q9BRQ0 406 aa6.88□□□□□ -1.31
HTT-208ENST00000510626 DEPPQ9NTK1 212 aa6.88□□□□□ -1.31
HTT-208ENST00000510626 PAX8Q06710 450 aa6.87□□□□□ -1.31
HTT-208ENST00000510626 FBXL15Q9H469 300 aa6.87□□□□□ -1.31
HTT-208ENST00000510626 KIAA1549Q9HCM3 1950 aa6.87□□□□□ -1.31
HTT-208ENST00000510626 ZC2HC1BQ5TFG8 222 aa6.87□□□□□ -1.31
HTT-208ENST00000510626 AMN1Q8IY45 258 aa6.87□□□□□ -1.31
HTT-208ENST00000510626 JPT2Q9H910 190 aa6.87□□□□□ -1.31
HTT-208ENST00000510626 LOC102723996A0A087X1L8 192 aa6.87□□□□□ -1.31
HTT-208ENST00000510626 GPHA2Q96T91 129 aa6.87□□□□□ -1.31
HTT-208ENST00000510626 RBAKDNA6NC62 111 aa6.87□□□□□ -1.31
HTT-208ENST00000510626 ATP5EP2Q5VTU8 51 aa6.87□□□□□ -1.31
HTT-208ENST00000510626 DEFB123Q8N688 67 aa6.87□□□□□ -1.31
HTT-208ENST00000510626 MRAPQ8TCY5 172 aa6.87□□□□□ -1.31
HTT-208ENST00000510626 JMJD8Q96S16 334 aa6.87□□□□□ -1.31
HTT-208ENST00000510626 CRIM1Q9NZV1 1036 aa6.87□□□□□ -1.31
HTT-208ENST00000510626 PIEZO1Q92508 2521 aa6.87□□□□□ -1.31
HTT-208ENST00000510626 HOXD3P31249 432 aaPredicted RBP6.87□□□□□ -1.31
HTT-208ENST00000510626 GAGE2AQ6NT46 116 aa6.87□□□□□ -1.31
HTT-208ENST00000510626 C9JAW5 83 aa6.87□□□□□ -1.31
HTT-208ENST00000510626 PRTN3P24158 256 aa6.87□□□□□ -1.31
HTT-208ENST00000510626 ERCC8Q13216 396 aa6.87□□□□□ -1.31
HTT-208ENST00000510626 IMMP1LQ96LU5 166 aa6.87□□□□□ -1.31
HTT-208ENST00000510626 H3BTX0 84 aa6.87□□□□□ -1.31
HTT-208ENST00000510626 MAFAQ8NHW3 353 aaPredicted RBP6.87□□□□□ -1.31
HTT-208ENST00000510626 NUP210Q8TEM1 1887 aaPredicted RBP6.87□□□□□ -1.31
HTT-208ENST00000510626 TRPT1Q86TN4 253 aaKnown RBP6.86□□□□□ -1.31
HTT-208ENST00000510626 GTSCR1Q86UQ5 136 aa6.86□□□□□ -1.31
HTT-208ENST00000510626 DCTN5Q9BTE1 182 aa6.86□□□□□ -1.31
HTT-208ENST00000510626 FOXG1P55316 489 aaPredicted RBP6.86□□□□□ -1.31
HTT-208ENST00000510626 Q6ZWC4 215 aa6.86□□□□□ -1.31
HTT-208ENST00000510626 DSCR9P59020 149 aa6.86□□□□□ -1.31
HTT-208ENST00000510626 LINC00158P58513 81 aa6.86□□□□□ -1.31
HTT-208ENST00000510626 M0R1W7 72 aa6.86□□□□□ -1.31
HTT-208ENST00000510626 ANKRD39Q53RE8 183 aa6.86□□□□□ -1.31
HTT-208ENST00000510626 ZNF474Q6S9Z5 364 aaPredicted RBP6.86□□□□□ -1.31
HTT-208ENST00000510626 ZCCHC24Q8N2G6 241 aaKnown RBP6.86□□□□□ -1.31
HTT-208ENST00000510626 H0YGX0 51 aa6.86□□□□□ -1.31
HTT-208ENST00000510626 RPL36AP83881 106 aaKnown RBP6.86□□□□□ -1.31
HTT-208ENST00000510626 RPL36ALQ969Q0 106 aaKnown RBP6.86□□□□□ -1.31
HTT-208ENST00000510626 TOMM7Q9P0U1 55 aa6.86□□□□□ -1.31
HTT-208ENST00000510626 ZNF462Q96JM2 2506 aa6.86□□□□□ -1.31
HTT-208ENST00000510626 SH2D1AO60880 128 aa6.86□□□□□ -1.31
HTT-208ENST00000510626 PSG7Q13046 419 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms