RNA–Protein interactions for RNA: ENST00000510533.5

NEK1-206, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-206ENST00000510533 ZNF562Q6V9R5 426 aa8.59□□□□□ -1.03
NEK1-206ENST00000510533 BRD3OSQ6XYD6 125 aa8.59□□□□□ -1.03
NEK1-206ENST00000510533 C1orf159Q96HA4 380 aa8.59□□□□□ -1.03
NEK1-206ENST00000510533 TIMM21Q9BVV7 248 aa8.59□□□□□ -1.03
NEK1-206ENST00000510533 GTSF1LQ9H1H1 148 aa8.59□□□□□ -1.03
NEK1-206ENST00000510533 EREGO14944 169 aa8.59□□□□□ -1.03
NEK1-206ENST00000510533 IGHV3-53P01767 116 aa8.59□□□□□ -1.03
NEK1-206ENST00000510533 ARMS2P0C7Q2 107 aa8.59□□□□□ -1.03
NEK1-206ENST00000510533 OVOL2Q9BRP0 275 aa8.59□□□□□ -1.03
NEK1-206ENST00000510533 POLR3KQ9Y2Y1 108 aaPredicted RBP8.59□□□□□ -1.03
NEK1-206ENST00000510533 LYPD2Q6UXB3 125 aa8.59□□□□□ -1.03
NEK1-206ENST00000510533 RHPN1-AS1Q9BWJ2 59 aa8.59□□□□□ -1.03
NEK1-206ENST00000510533 ZNF492Q9P255 531 aa8.59□□□□□ -1.03
NEK1-206ENST00000510533 GVINP1Q7Z2Y8 2422 aa8.59□□□□□ -1.03
NEK1-206ENST00000510533 B4DSR2 109 aa8.58□□□□□ -1.04
NEK1-206ENST00000510533 LEPROTO15243 131 aa8.58□□□□□ -1.04
NEK1-206ENST00000510533 LY6G5BQ8NDX9 201 aa8.58□□□□□ -1.04
NEK1-206ENST00000510533 LIME1Q9H400 295 aa8.58□□□□□ -1.04
NEK1-206ENST00000510533 A0A087WWL8 130 aa8.58□□□□□ -1.04
NEK1-206ENST00000510533 IGKV1-6A0A0C4DH72 117 aa8.58□□□□□ -1.04
NEK1-206ENST00000510533 A8MWP6 167 aa8.58□□□□□ -1.04
NEK1-206ENST00000510533 C20orf144Q9BQM9 153 aa8.58□□□□□ -1.04
NEK1-206ENST00000510533 COX11Q9Y6N1 276 aa8.58□□□□□ -1.04
NEK1-206ENST00000510533 A0A1W2PPI3 338 aa8.58□□□□□ -1.04
NEK1-206ENST00000510533 INSP01308 110 aa8.58□□□□□ -1.04
NEK1-206ENST00000510533 PFN1P07737 140 aaKnown RBP8.58□□□□□ -1.04
NEK1-206ENST00000510533 C6orf226Q5I0X4 101 aa8.58□□□□□ -1.04
NEK1-206ENST00000510533 PIP4P2Q8N4L2 257 aa8.58□□□□□ -1.04
NEK1-206ENST00000510533 TP53BP1Q12888 1972 aaPredicted RBP8.58□□□□□ -1.04
NEK1-206ENST00000510533 TRAV8-3A0A0A6YYJ7 113 aa8.58□□□□□ -1.04
NEK1-206ENST00000510533 STPG4Q8N801 248 aa8.58□□□□□ -1.04
NEK1-206ENST00000510533 TMEM75Q8N9X5 138 aa8.58□□□□□ -1.04
NEK1-206ENST00000510533 IGHG3P01860 377 aa8.58□□□□□ -1.04
NEK1-206ENST00000510533 ADAMTSL5Q6ZMM2 481 aa8.58□□□□□ -1.04
NEK1-206ENST00000510533 BRWD3Q6RI45 1802 aa8.57□□□□□ -1.04
NEK1-206ENST00000510533 C18orf32Q8TCD1 76 aa8.57□□□□□ -1.04
NEK1-206ENST00000510533 HS3ST6Q96QI5 342 aa8.57□□□□□ -1.04
NEK1-206ENST00000510533 SPXQ9BT56 116 aa8.57□□□□□ -1.04
NEK1-206ENST00000510533 INTS1Q8N201 2190 aaKnown RBP8.57□□□□□ -1.04
NEK1-206ENST00000510533 FAM231BA6NCW3 169 aa8.57□□□□□ -1.04
NEK1-206ENST00000510533 LRRK1Q38SD2 2015 aa8.57□□□□□ -1.04
NEK1-206ENST00000510533 TRAV13-1A0A0B4J241 112 aa8.57□□□□□ -1.04
NEK1-206ENST00000510533 COL8A2P25067 703 aa8.57□□□□□ -1.04
NEK1-206ENST00000510533 PRIMA1Q86XR5 153 aa8.57□□□□□ -1.04
NEK1-206ENST00000510533 WNK3Q9BYP7 1800 aa8.57□□□□□ -1.04
NEK1-206ENST00000510533 CT83Q5H943 113 aa8.56□□□□□ -1.04
NEK1-206ENST00000510533 DAZ1Q9NQZ3 744 aaKnown RBP8.56□□□□□ -1.04
NEK1-206ENST00000510533 TMEM213A2RRL7 107 aa8.56□□□□□ -1.04
NEK1-206ENST00000510533 C9JAW5 83 aa8.56□□□□□ -1.04
NEK1-206ENST00000510533 RPL35AP18077 110 aaKnown RBP8.56□□□□□ -1.04
NEK1-206ENST00000510533 C1orf122Q6ZSJ8 110 aa8.56□□□□□ -1.04
NEK1-206ENST00000510533 TMEM14BQ9NUH8 114 aa8.56□□□□□ -1.04
NEK1-206ENST00000510533 ANAPC10Q9UM13 185 aa8.56□□□□□ -1.04
NEK1-206ENST00000510533 A0A1B0GUS0 222 aa8.56□□□□□ -1.04
NEK1-206ENST00000510533 TRPT1Q86TN4 253 aaKnown RBP8.56□□□□□ -1.04
NEK1-206ENST00000510533 ZNF48Q96MX3 618 aaPredicted RBP8.56□□□□□ -1.04
NEK1-206ENST00000510533 DNAJC30Q96LL9 226 aa8.55□□□□□ -1.04
NEK1-206ENST00000510533 C1QTNF4Q9BXJ3 329 aa8.55□□□□□ -1.04
NEK1-206ENST00000510533 MED12Q93074 2177 aa8.55□□□□□ -1.04
NEK1-206ENST00000510533 PRSS46E5RG02 174 aa8.55□□□□□ -1.04
NEK1-206ENST00000510533 SPINK8P0C7L1 97 aa8.55□□□□□ -1.04
NEK1-206ENST00000510533 CFHR2P36980 270 aa8.55□□□□□ -1.04
NEK1-206ENST00000510533 UBE2E2Q96LR5 201 aa8.55□□□□□ -1.04
NEK1-206ENST00000510533 OVOL3O00110 214 aa8.55□□□□□ -1.04
NEK1-206ENST00000510533 PAX9P55771 341 aa8.55□□□□□ -1.04
NEK1-206ENST00000510533 FAM104BQ5XKR9 115 aa8.55□□□□□ -1.04
NEK1-206ENST00000510533 LMO1P25800 156 aa8.54□□□□□ -1.04
NEK1-206ENST00000510533 SAA4P35542 130 aa8.54□□□□□ -1.04
NEK1-206ENST00000510533 NEGR1Q7Z3B1 354 aa8.54□□□□□ -1.04
NEK1-206ENST00000510533 CYYR1Q96J86 154 aa8.54□□□□□ -1.04
NEK1-206ENST00000510533 VWC2LB2RUY7 222 aa8.54□□□□□ -1.04
NEK1-206ENST00000510533 IL17RELQ6ZVW7 336 aa8.54□□□□□ -1.04
NEK1-206ENST00000510533 NDUFA4L2Q9NRX3 87 aa8.54□□□□□ -1.04
NEK1-206ENST00000510533 NDUFB8O95169 186 aa8.54□□□□□ -1.04
NEK1-206ENST00000510533 YPEL3P61236 119 aaPredicted RBP8.54□□□□□ -1.04
NEK1-206ENST00000510533 GAGE2AQ6NT46 116 aa8.54□□□□□ -1.04
NEK1-206ENST00000510533 LCNL1Q6ZST4 164 aa8.54□□□□□ -1.04
NEK1-206ENST00000510533 ZNF625Q96I27 306 aaPredicted RBP8.54□□□□□ -1.04
NEK1-206ENST00000510533 C8orf49Q96NF6 230 aa8.54□□□□□ -1.04
NEK1-206ENST00000510533 ZNRD1Q9P1U0 126 aa8.54□□□□□ -1.04
NEK1-206ENST00000510533 Q6ZS92 163 aa8.54□□□□□ -1.04
NEK1-206ENST00000510533 KLHL30-AS1Q8NEE0 82 aa8.54□□□□□ -1.04
NEK1-206ENST00000510533 EDA2RQ9HAV5 297 aa8.54□□□□□ -1.04
NEK1-206ENST00000510533 WDR90Q96KV7 1748 aa8.54□□□□□ -1.04
NEK1-206ENST00000510533 Q8N8P6 123 aa8.53□□□□□ -1.04
NEK1-206ENST00000510533 TP53TG1Q9Y2A0 90 aa8.53□□□□□ -1.04
NEK1-206ENST00000510533 SS18Q15532 418 aa8.53□□□□□ -1.04
NEK1-206ENST00000510533 LY6HO94772 140 aa8.53□□□□□ -1.04
NEK1-206ENST00000510533 C2orf66Q6UXQ4 117 aa8.53□□□□□ -1.04
NEK1-206ENST00000510533 LURAP1LQ8IV03 231 aa8.53□□□□□ -1.04
NEK1-206ENST00000510533 FAM110DQ8TAY7 271 aaPredicted RBP8.53□□□□□ -1.04
NEK1-206ENST00000510533 SNHG12Q9BXW3 62 aa8.53□□□□□ -1.04
NEK1-206ENST00000510533 TRBV19A0A075B6N1 114 aa8.53□□□□□ -1.04
NEK1-206ENST00000510533 ZNF726P1Q15940 193 aa8.53□□□□□ -1.04
NEK1-206ENST00000510533 TMEM141Q96I45 108 aa8.53□□□□□ -1.04
NEK1-206ENST00000510533 C1orf147Q96MC9 270 aaPredicted RBP8.53□□□□□ -1.04
NEK1-206ENST00000510533 E7EQL1 145 aa8.53□□□□□ -1.04
NEK1-206ENST00000510533 INS-IGF2F8WCM5 200 aa8.53□□□□□ -1.04
NEK1-206ENST00000510533 EP300Q09472 2414 aaPredicted RBP8.52□□□□□ -1.05
NEK1-206ENST00000510533 DKK1O94907 266 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms