RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 OR1B1Q8NGR6 318 aa5.25□□□□□ -1.57
TOPBP1-207ENST00000509162 THAP6Q8TBB0 222 aa5.25□□□□□ -1.57
TOPBP1-207ENST00000509162 GRAMD2BQ96HH9 432 aa5.25□□□□□ -1.57
TOPBP1-207ENST00000509162 WWC2-AS2Q96NR7 200 aa5.25□□□□□ -1.57
TOPBP1-207ENST00000509162 TMEM147Q9BVK8 224 aa5.25□□□□□ -1.57
TOPBP1-207ENST00000509162 GGACTQ9BVM4 153 aa5.25□□□□□ -1.57
TOPBP1-207ENST00000509162 SLC25A39Q9BZJ4 359 aaPredicted RBP5.25□□□□□ -1.57
TOPBP1-207ENST00000509162 TUBA4BQ9H853 241 aa5.25□□□□□ -1.57
TOPBP1-207ENST00000509162 SEPSECSQ9HD40 501 aaKnown RBP5.25□□□□□ -1.57
TOPBP1-207ENST00000509162 NRN1Q9NPD7 142 aa5.25□□□□□ -1.57
TOPBP1-207ENST00000509162 RNF222A6NCQ9 220 aa5.24□□□□□ -1.57
TOPBP1-207ENST00000509162 A8MTW9 85 aa5.24□□□□□ -1.57
TOPBP1-207ENST00000509162 H3BTX0 84 aa5.24□□□□□ -1.57
TOPBP1-207ENST00000509162 L7N2F9 121 aa5.24□□□□□ -1.57
TOPBP1-207ENST00000509162 SSNA1O43805 119 aa5.24□□□□□ -1.57
TOPBP1-207ENST00000509162 RPP30P78346 268 aaKnown RBP5.24□□□□□ -1.57
TOPBP1-207ENST00000509162 CLINT1Q14677 625 aa5.24□□□□□ -1.57
TOPBP1-207ENST00000509162 AMTNQ6UX39 209 aa5.24□□□□□ -1.57
TOPBP1-207ENST00000509162 ZNF546Q86UE3 836 aa5.24□□□□□ -1.57
TOPBP1-207ENST00000509162 RNF182Q8N6D2 247 aa5.24□□□□□ -1.57
TOPBP1-207ENST00000509162 ZNF709Q8N972 641 aa5.24□□□□□ -1.57
TOPBP1-207ENST00000509162 CSNK1G2-AS1Q8NCQ2 148 aa5.24□□□□□ -1.57
TOPBP1-207ENST00000509162 OR5C1Q8NGR4 320 aa5.24□□□□□ -1.57
TOPBP1-207ENST00000509162 NEU1Q99519 415 aa5.24□□□□□ -1.57
TOPBP1-207ENST00000509162 TMEM231Q9H6L2 316 aa5.24□□□□□ -1.57
TOPBP1-207ENST00000509162 SLC25A22Q9H936 323 aa5.24□□□□□ -1.57
TOPBP1-207ENST00000509162 NPVFQ9HCQ7 196 aa5.24□□□□□ -1.57
TOPBP1-207ENST00000509162 UQCC1Q9NVA1 299 aa5.24□□□□□ -1.57
TOPBP1-207ENST00000509162 HSPB11Q9Y547 144 aa5.24□□□□□ -1.57
TOPBP1-207ENST00000509162 A0A087X0K7 114 aa5.23□□□□□ -1.57
TOPBP1-207ENST00000509162 A0A1W2PS18 150 aa5.23□□□□□ -1.57
TOPBP1-207ENST00000509162 HELTA6NFD8 242 aa5.23□□□□□ -1.57
TOPBP1-207ENST00000509162 E5RGE8 158 aa5.23□□□□□ -1.57
TOPBP1-207ENST00000509162 H3BMM0 161 aa5.23□□□□□ -1.57
TOPBP1-207ENST00000509162 H3BQ15 152 aa5.23□□□□□ -1.57
TOPBP1-207ENST00000509162 SMLR1H3BR10 107 aa5.23□□□□□ -1.57
TOPBP1-207ENST00000509162 RBMY1A1P0DJD3 496 aaKnown RBP5.23□□□□□ -1.57
TOPBP1-207ENST00000509162 RBMY1CP0DJD4 496 aa5.23□□□□□ -1.57
TOPBP1-207ENST00000509162 IGLC2P0DOY2 106 aa5.23□□□□□ -1.57
TOPBP1-207ENST00000509162 HLA-DRB4P13762 266 aa5.23□□□□□ -1.57
TOPBP1-207ENST00000509162 FGF7P21781 194 aa5.23□□□□□ -1.57
TOPBP1-207ENST00000509162 CAMLGP49069 296 aa5.23□□□□□ -1.57
TOPBP1-207ENST00000509162 RBMY1FQ15415 496 aaKnown RBP5.23□□□□□ -1.57
TOPBP1-207ENST00000509162 ACTL10Q5JWF8 245 aa5.23□□□□□ -1.57
TOPBP1-207ENST00000509162 C1orf194Q5T5A4 169 aa5.23□□□□□ -1.57
TOPBP1-207ENST00000509162 RNF183Q96D59 192 aa5.23□□□□□ -1.57
TOPBP1-207ENST00000509162 ZNF503Q96F45 646 aa5.23□□□□□ -1.57
TOPBP1-207ENST00000509162 FAM167A-AS1Q96KT0 104 aa5.23□□□□□ -1.57
TOPBP1-207ENST00000509162 RSG1Q9BU20 258 aa5.23□□□□□ -1.57
TOPBP1-207ENST00000509162 NPCDR1Q9BY65 106 aa5.23□□□□□ -1.57
TOPBP1-207ENST00000509162 SMIM3Q9BZL3 60 aa5.23□□□□□ -1.57
TOPBP1-207ENST00000509162 WDR61Q9GZS3 305 aaKnown RBP5.23□□□□□ -1.57
TOPBP1-207ENST00000509162 ARL6Q9H0F7 186 aa5.23□□□□□ -1.57
TOPBP1-207ENST00000509162 ARV1Q9H2C2 271 aa5.23□□□□□ -1.57
TOPBP1-207ENST00000509162 HIGD1AQ9Y241 93 aa5.23□□□□□ -1.57
TOPBP1-207ENST00000509162 PXMP4Q9Y6I8 212 aa5.23□□□□□ -1.57
TOPBP1-207ENST00000509162 HLA-DRB4X5D2U9 266 aa5.23□□□□□ -1.57
TOPBP1-207ENST00000509162 HECTD4Q9Y4D8 3996 aa5.22□□□□□ -1.57
TOPBP1-207ENST00000509162 KIR2DL5BA0A0G2JN68 375 aa5.22□□□□□ -1.57
TOPBP1-207ENST00000509162 KIR2DL5BA0A0G2JPC4 375 aa5.22□□□□□ -1.57
TOPBP1-207ENST00000509162 PRAC2D3DTV9 90 aa5.22□□□□□ -1.57
TOPBP1-207ENST00000509162 DNASE2O00115 360 aaPredicted RBP5.22□□□□□ -1.57
TOPBP1-207ENST00000509162 HYPMO75409 117 aa5.22□□□□□ -1.57
TOPBP1-207ENST00000509162 SCGB2A1O75556 95 aa5.22□□□□□ -1.57
TOPBP1-207ENST00000509162 CA1P00915 261 aaPredicted RBP5.22□□□□□ -1.57
TOPBP1-207ENST00000509162 ZNF705DP0CH99 300 aaPredicted RBP5.22□□□□□ -1.57
TOPBP1-207ENST00000509162 ZNF705BP0CI00 300 aaPredicted RBP5.22□□□□□ -1.57
TOPBP1-207ENST00000509162 BMI1P35226 326 aa5.22□□□□□ -1.57
TOPBP1-207ENST00000509162 PSMB3P49720 205 aa5.22□□□□□ -1.57
TOPBP1-207ENST00000509162 BAXQ07812 192 aa5.22□□□□□ -1.57
TOPBP1-207ENST00000509162 RGS21Q2M5E4 152 aa5.22□□□□□ -1.57
TOPBP1-207ENST00000509162 ZFAND6Q6FIF0 208 aa5.22□□□□□ -1.57
TOPBP1-207ENST00000509162 MIR17HGQ75NE6 70 aa5.22□□□□□ -1.57
TOPBP1-207ENST00000509162 KIR2DL5AQ8N109 375 aa5.22□□□□□ -1.57
TOPBP1-207ENST00000509162 Q8NAQ8 132 aa5.22□□□□□ -1.57
TOPBP1-207ENST00000509162 KIR2DL5BQ8NHK3 375 aa5.22□□□□□ -1.57
TOPBP1-207ENST00000509162 SLC25A2Q9BXI2 301 aa5.22□□□□□ -1.57
TOPBP1-207ENST00000509162 SAV1Q9H4B6 383 aaPredicted RBP5.22□□□□□ -1.57
TOPBP1-207ENST00000509162 SLC39A9Q9NUM3 307 aa5.22□□□□□ -1.57
TOPBP1-207ENST00000509162 CLEC5AQ9NY25 188 aa5.22□□□□□ -1.57
TOPBP1-207ENST00000509162 FBXL17Q9UF56 701 aa5.22□□□□□ -1.57
TOPBP1-207ENST00000509162 A0A0J9YWU9 116 aa5.21□□□□□ -1.58
TOPBP1-207ENST00000509162 A0A0J9YX75 114 aa5.21□□□□□ -1.58
TOPBP1-207ENST00000509162 DEFB4AO15263 64 aa5.21□□□□□ -1.58
TOPBP1-207ENST00000509162 NDUFB4O95168 129 aa5.21□□□□□ -1.58
TOPBP1-207ENST00000509162 CD5P06127 495 aa5.21□□□□□ -1.58
TOPBP1-207ENST00000509162 GIPP09681 153 aaPredicted RBP5.21□□□□□ -1.58
TOPBP1-207ENST00000509162 OR5G3P0C626 314 aa5.21□□□□□ -1.58
TOPBP1-207ENST00000509162 PYYP10082 97 aa5.21□□□□□ -1.58
TOPBP1-207ENST00000509162 S100A11P31949 105 aa5.21□□□□□ -1.58
TOPBP1-207ENST00000509162 RPL29P47914 159 aaKnown RBP5.21□□□□□ -1.58
TOPBP1-207ENST00000509162 FXYD7P58549 80 aa5.21□□□□□ -1.58
TOPBP1-207ENST00000509162 B2MP61769 119 aa5.21□□□□□ -1.58
TOPBP1-207ENST00000509162 SELENOTP62341 195 aa5.21□□□□□ -1.58
TOPBP1-207ENST00000509162 Q6ZWC4 215 aa5.21□□□□□ -1.58
TOPBP1-207ENST00000509162 LINC00305Q7Z4B0 112 aa5.21□□□□□ -1.58
TOPBP1-207ENST00000509162 STX12Q86Y82 276 aa5.21□□□□□ -1.58
TOPBP1-207ENST00000509162 OR8I2Q8N0Y5 310 aa5.21□□□□□ -1.58
TOPBP1-207ENST00000509162 MUC7Q8TAX7 377 aa5.21□□□□□ -1.58
TOPBP1-207ENST00000509162 SAT2Q96F10 170 aaPredicted RBP5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms