RNA–Protein interactions for RNA: ENST00000509084.1

RFC1-211, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-211ENST00000509084 BCL2P10415 239 aa7.88□□□□□ -1.15
RFC1-211ENST00000509084 TCF24Q7RTU0 167 aa7.88□□□□□ -1.15
RFC1-211ENST00000509084 LYPD1Q8N2G4 141 aa7.88□□□□□ -1.15
RFC1-211ENST00000509084 LINC00482Q8N8I6 264 aa7.88□□□□□ -1.15
RFC1-211ENST00000509084 FAM210AQ96ND0 272 aa7.88□□□□□ -1.15
RFC1-211ENST00000509084 MCRIP2Q9BUT9 160 aaKnown RBP7.88□□□□□ -1.15
RFC1-211ENST00000509084 SMDT1Q9H4I9 107 aa7.88□□□□□ -1.15
RFC1-211ENST00000509084 CLEC5AQ9NY25 188 aa7.88□□□□□ -1.15
RFC1-211ENST00000509084 TRBV19A0A075B6N1 114 aa7.87□□□□□ -1.15
RFC1-211ENST00000509084 PAFAH1B2P68402 229 aa7.87□□□□□ -1.15
RFC1-211ENST00000509084 CCL20P78556 96 aa7.87□□□□□ -1.15
RFC1-211ENST00000509084 PSG9Q00887 426 aa7.87□□□□□ -1.15
RFC1-211ENST00000509084 ZNF506Q5JVG8 444 aa7.87□□□□□ -1.15
RFC1-211ENST00000509084 OR2K2Q8NGT1 345 aa7.87□□□□□ -1.15
RFC1-211ENST00000509084 TCEAL7Q9BRU2 100 aa7.87□□□□□ -1.15
RFC1-211ENST00000509084 TMPRSS5Q9H3S3 457 aa7.87□□□□□ -1.15
RFC1-211ENST00000509084 AAMDCQ9H7C9 122 aa7.87□□□□□ -1.15
RFC1-211ENST00000509084 ZNF586Q9NXT0 402 aa7.87□□□□□ -1.15
RFC1-211ENST00000509084 VAX2Q9UIW0 290 aa7.87□□□□□ -1.15
RFC1-211ENST00000509084 NIPBLQ6KC79 2804 aaeCLIP7.87□□□□□ -1.15
RFC1-211ENST00000509084 TRAV2A0A0B4J234 112 aa7.86□□□□□ -1.15
RFC1-211ENST00000509084 TRAV25A0A0B4J276 109 aa7.86□□□□□ -1.15
RFC1-211ENST00000509084 LOC102723971A0A1B0GUV8 181 aa7.86□□□□□ -1.15
RFC1-211ENST00000509084 RBFOX3A6NFN3 312 aa7.86□□□□□ -1.15
RFC1-211ENST00000509084 PAGE4O60829 102 aa7.86□□□□□ -1.15
RFC1-211ENST00000509084 INSL3P51460 131 aa7.86□□□□□ -1.15
RFC1-211ENST00000509084 UBE2G2P60604 165 aa7.86□□□□□ -1.15
RFC1-211ENST00000509084 RPL11P62913 178 aaKnown RBP7.86□□□□□ -1.15
RFC1-211ENST00000509084 MEF2BQ02080 365 aaPredicted RBP7.86□□□□□ -1.15
RFC1-211ENST00000509084 PEA15Q15121 130 aa7.86□□□□□ -1.15
RFC1-211ENST00000509084 HAGHQ16775 308 aa7.86□□□□□ -1.15
RFC1-211ENST00000509084 TOR2AQ5JU69 321 aa7.86□□□□□ -1.15
RFC1-211ENST00000509084 FAM90A2PQ658T7 463 aa7.86□□□□□ -1.15
RFC1-211ENST00000509084 UQCC3Q6UW78 93 aa7.86□□□□□ -1.15
RFC1-211ENST00000509084 COMMD7Q86VX2 200 aa7.86□□□□□ -1.15
RFC1-211ENST00000509084 BLNKQ8WV28 456 aa7.86□□□□□ -1.15
RFC1-211ENST00000509084 EIF5A2Q9GZV4 153 aaKnown RBP7.86□□□□□ -1.15
RFC1-211ENST00000509084 NRN1Q9NPD7 142 aa7.86□□□□□ -1.15
RFC1-211ENST00000509084 OTORQ9NRC9 128 aa7.86□□□□□ -1.15
RFC1-211ENST00000509084 MLXQ9UH92 298 aa7.86□□□□□ -1.15
RFC1-211ENST00000509084 FAM74A7A6NL05 159 aa7.85□□□□□ -1.15
RFC1-211ENST00000509084 C11orf94C9JXX5 98 aa7.85□□□□□ -1.15
RFC1-211ENST00000509084 F6UZH7 168 aa7.85□□□□□ -1.15
RFC1-211ENST00000509084 H3BQ15 152 aa7.85□□□□□ -1.15
RFC1-211ENST00000509084 PDE6DO43924 150 aa7.85□□□□□ -1.15
RFC1-211ENST00000509084 SAP30O75446 220 aa7.85□□□□□ -1.15
RFC1-211ENST00000509084 CST9LP1Q5W188 147 aa7.85□□□□□ -1.15
RFC1-211ENST00000509084 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.85□□□□□ -1.15
RFC1-211ENST00000509084 RBPMS2Q6ZRY4 209 aaKnown RBP7.85□□□□□ -1.15
RFC1-211ENST00000509084 EIF4E3Q8N5X7 224 aaKnown RBP7.85□□□□□ -1.15
RFC1-211ENST00000509084 ARL6IP6Q8N6S5 226 aa7.85□□□□□ -1.15
RFC1-211ENST00000509084 MRPL53Q96EL3 112 aaKnown RBP7.85□□□□□ -1.15
RFC1-211ENST00000509084 GPR61Q9BZJ8 451 aa7.85□□□□□ -1.15
RFC1-211ENST00000509084 Q9H3A6 140 aa7.85□□□□□ -1.15
RFC1-211ENST00000509084 ZNF331Q9NQX6 463 aaPredicted RBP7.85□□□□□ -1.15
RFC1-211ENST00000509084 PRELID1Q9Y255 219 aa7.85□□□□□ -1.15
RFC1-211ENST00000509084 SMAD5-AS1Q9Y6J3 95 aa7.85□□□□□ -1.15
RFC1-211ENST00000509084 ISLRO14498 428 aa7.84□□□□□ -1.15
RFC1-211ENST00000509084 TSPAN4O14817 238 aa7.84□□□□□ -1.15
RFC1-211ENST00000509084 EDN2P20800 178 aa7.84□□□□□ -1.15
RFC1-211ENST00000509084 ID1P41134 155 aa7.84□□□□□ -1.15
RFC1-211ENST00000509084 RANP62826 216 aaKnown RBP7.84□□□□□ -1.15
RFC1-211ENST00000509084 DEFB114Q30KQ6 69 aa7.84□□□□□ -1.15
RFC1-211ENST00000509084 C9orf66Q5T8R8 295 aa7.84□□□□□ -1.15
RFC1-211ENST00000509084 ADAMTSL5Q6ZMM2 481 aa7.84□□□□□ -1.15
RFC1-211ENST00000509084 C5orf17Q8NAS9 161 aa7.84□□□□□ -1.15
RFC1-211ENST00000509084 CMTM2Q8TAZ6 248 aa7.84□□□□□ -1.15
RFC1-211ENST00000509084 SPAG8Q99932 426 aaPredicted RBP7.84□□□□□ -1.15
RFC1-211ENST00000509084 YTHDF2Q9Y5A9 579 aaKnown RBP7.84□□□□□ -1.15
RFC1-211ENST00000509084 JMJD1CQ15652 2540 aa7.83□□□□□ -1.16
RFC1-211ENST00000509084 SERTM2A0A1B0GWG4 89 aa7.83□□□□□ -1.16
RFC1-211ENST00000509084 PGPA6NDG6 321 aa7.83□□□□□ -1.16
RFC1-211ENST00000509084 GGTLC3B5MD39 225 aa7.83□□□□□ -1.16
RFC1-211ENST00000509084 TMEM250H0YL14 139 aa7.83□□□□□ -1.16
RFC1-211ENST00000509084 DNASE2O00115 360 aaPredicted RBP7.83□□□□□ -1.16
RFC1-211ENST00000509084 NDUFB4O95168 129 aa7.83□□□□□ -1.16
RFC1-211ENST00000509084 IGLV1-51P01701 117 aa7.83□□□□□ -1.16
RFC1-211ENST00000509084 CSN1S1P47710 185 aa7.83□□□□□ -1.16
RFC1-211ENST00000509084 ATP5G3P48201 142 aa7.83□□□□□ -1.16
RFC1-211ENST00000509084 SUMO1P63165 101 aaKnown RBP7.83□□□□□ -1.16
RFC1-211ENST00000509084 ICAM4Q14773 271 aa7.83□□□□□ -1.16
RFC1-211ENST00000509084 LCN12Q6JVE5 192 aa7.83□□□□□ -1.16
RFC1-211ENST00000509084 RXFP4Q8TDU9 374 aa7.83□□□□□ -1.16
RFC1-211ENST00000509084 HIST1H2BAQ96A08 127 aa7.83□□□□□ -1.16
RFC1-211ENST00000509084 RPUSD4Q96CM3 377 aaKnown RBP7.83□□□□□ -1.16
RFC1-211ENST00000509084 C16orf92Q96LL3 132 aa7.83□□□□□ -1.16
RFC1-211ENST00000509084 MS4A6AQ9H2W1 248 aa7.83□□□□□ -1.16
RFC1-211ENST00000509084 TREM1Q9NP99 234 aa7.83□□□□□ -1.16
RFC1-211ENST00000509084 OR4C46A6NHA9 309 aa7.82□□□□□ -1.16
RFC1-211ENST00000509084 H3BTX0 84 aa7.82□□□□□ -1.16
RFC1-211ENST00000509084 K7EQM0 130 aa7.82□□□□□ -1.16
RFC1-211ENST00000509084 SLC17A3O00476 420 aa7.82□□□□□ -1.16
RFC1-211ENST00000509084 SOCS3O14543 225 aa7.82□□□□□ -1.16
RFC1-211ENST00000509084 SLC25A5P05141 298 aaKnown RBP7.82□□□□□ -1.16
RFC1-211ENST00000509084 SNRPD3P62318 126 aaKnown RBP7.82□□□□□ -1.16
RFC1-211ENST00000509084 CD300EQ496F6 205 aaPredicted RBP7.82□□□□□ -1.16
RFC1-211ENST00000509084 TMEM61Q8N0U2 210 aa7.82□□□□□ -1.16
RFC1-211ENST00000509084 WFDC9Q8NEX5 89 aa7.82□□□□□ -1.16
RFC1-211ENST00000509084 DCANP1Q8TF63 244 aa7.82□□□□□ -1.16
RFC1-211ENST00000509084 C11orf52Q96A22 123 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms