RNA–Protein interactions for RNA: ENST00000508459.5

HMGCLL1-208, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-208ENST00000508459 RFNGQ9Y644 331 aa10.97□□□□□ -0.65
HMGCLL1-208ENST00000508459 TRBV19A0A075B6N1 114 aa10.96□□□□□ -0.65
HMGCLL1-208ENST00000508459 LINC00862A6NCI5 91 aa10.96□□□□□ -0.65
HMGCLL1-208ENST00000508459 RBFOX3A6NFN3 312 aa10.96□□□□□ -0.65
HMGCLL1-208ENST00000508459 OR4C46A6NHA9 309 aa10.96□□□□□ -0.65
HMGCLL1-208ENST00000508459 DNASE2O00115 360 aaPredicted RBP10.96□□□□□ -0.65
HMGCLL1-208ENST00000508459 ZNF207O43670 478 aaKnown RBP10.96□□□□□ -0.65
HMGCLL1-208ENST00000508459 S100A9P06702 114 aaKnown RBP10.96□□□□□ -0.65
HMGCLL1-208ENST00000508459 IGLC2P0DOY2 106 aa10.96□□□□□ -0.65
HMGCLL1-208ENST00000508459 BCL2P10415 239 aa10.96□□□□□ -0.65
HMGCLL1-208ENST00000508459 CD33P20138 364 aa10.96□□□□□ -0.65
HMGCLL1-208ENST00000508459 MEF2BQ02080 365 aaPredicted RBP10.96□□□□□ -0.65
HMGCLL1-208ENST00000508459 C18orf65Q6ZTR6 163 aa10.96□□□□□ -0.65
HMGCLL1-208ENST00000508459 TCF24Q7RTU0 167 aa10.96□□□□□ -0.65
HMGCLL1-208ENST00000508459 CMTM2Q8TAZ6 248 aa10.96□□□□□ -0.65
HMGCLL1-208ENST00000508459 HIST1H2BAQ96A08 127 aa10.96□□□□□ -0.65
HMGCLL1-208ENST00000508459 FXYD5Q96DB9 178 aa10.96□□□□□ -0.65
HMGCLL1-208ENST00000508459 IGHV3OR16-8A0A075B7F1 116 aa10.95□□□□□ -0.66
HMGCLL1-208ENST00000508459 TMEM250H0YL14 139 aa10.95□□□□□ -0.66
HMGCLL1-208ENST00000508459 TSPAN4O14817 238 aa10.95□□□□□ -0.66
HMGCLL1-208ENST00000508459 CSN3P07498 182 aa10.95□□□□□ -0.66
HMGCLL1-208ENST00000508459 FGF8P55075 233 aaPredicted RBP10.95□□□□□ -0.66
HMGCLL1-208ENST00000508459 KRTAP10-3P60369 221 aa10.95□□□□□ -0.66
HMGCLL1-208ENST00000508459 SPATA31B1PQ5VZV4 182 aa10.95□□□□□ -0.66
HMGCLL1-208ENST00000508459 EIF4E3Q8N5X7 224 aaKnown RBP10.95□□□□□ -0.66
HMGCLL1-208ENST00000508459 WFDC9Q8NEX5 89 aa10.95□□□□□ -0.66
HMGCLL1-208ENST00000508459 TRAV5A0A0B4J249 113 aa10.94□□□□□ -0.66
HMGCLL1-208ENST00000508459 SAP30O75446 220 aa10.94□□□□□ -0.66
HMGCLL1-208ENST00000508459 OR10J4P0C629 311 aa10.94□□□□□ -0.66
HMGCLL1-208ENST00000508459 ZNF506Q5JVG8 444 aa10.94□□□□□ -0.66
HMGCLL1-208ENST00000508459 CST9LP1Q5W188 147 aa10.94□□□□□ -0.66
HMGCLL1-208ENST00000508459 LEMD1Q68G75 181 aa10.94□□□□□ -0.66
HMGCLL1-208ENST00000508459 C5orf17Q8NAS9 161 aa10.94□□□□□ -0.66
HMGCLL1-208ENST00000508459 ZNF414Q96IQ9 312 aa10.94□□□□□ -0.66
HMGCLL1-208ENST00000508459 C16orf92Q96LL3 132 aa10.94□□□□□ -0.66
HMGCLL1-208ENST00000508459 C11orf94C9JXX5 98 aa10.93□□□□□ -0.66
HMGCLL1-208ENST00000508459 MRPS12O15235 138 aaKnown RBP10.93□□□□□ -0.66
HMGCLL1-208ENST00000508459 DEFB114Q30KQ6 69 aa10.93□□□□□ -0.66
HMGCLL1-208ENST00000508459 PRR31Q5SQ13 230 aa10.93□□□□□ -0.66
HMGCLL1-208ENST00000508459 BLNKQ8WV28 456 aa10.93□□□□□ -0.66
HMGCLL1-208ENST00000508459 DUX3Q96PT4 197 aa10.93□□□□□ -0.66
HMGCLL1-208ENST00000508459 FAM110AQ9BQ89 295 aa10.93□□□□□ -0.66
HMGCLL1-208ENST00000508459 FAM74A7A6NL05 159 aa10.92□□□□□ -0.66
HMGCLL1-208ENST00000508459 PAGE4O60829 102 aa10.92□□□□□ -0.66
HMGCLL1-208ENST00000508459 PYYP10082 97 aa10.92□□□□□ -0.66
HMGCLL1-208ENST00000508459 RANP62826 216 aaKnown RBP10.92□□□□□ -0.66
HMGCLL1-208ENST00000508459 FAM74A3Q4VXF1 159 aa10.92□□□□□ -0.66
HMGCLL1-208ENST00000508459 MORN5Q5VZ52 161 aa10.92□□□□□ -0.66
HMGCLL1-208ENST00000508459 FAM90A2PQ658T7 463 aa10.92□□□□□ -0.66
HMGCLL1-208ENST00000508459 SSX7Q7RTT5 188 aa10.92□□□□□ -0.66
HMGCLL1-208ENST00000508459 ZNF331Q9NQX6 463 aaPredicted RBP10.92□□□□□ -0.66
HMGCLL1-208ENST00000508459 LOC102723971A0A1B0GUV8 181 aa10.91□□□□□ -0.66
HMGCLL1-208ENST00000508459 A0A1B0GV50 99 aa10.91□□□□□ -0.66
HMGCLL1-208ENST00000508459 IGLV1-51P01701 117 aa10.91□□□□□ -0.66
HMGCLL1-208ENST00000508459 APOHP02749 345 aaPredicted RBP10.91□□□□□ -0.66
HMGCLL1-208ENST00000508459 ZNF503Q96F45 646 aa10.91□□□□□ -0.66
HMGCLL1-208ENST00000508459 Q9H3A6 140 aa10.91□□□□□ -0.66
HMGCLL1-208ENST00000508459 ZNF586Q9NXT0 402 aa10.91□□□□□ -0.66
HMGCLL1-208ENST00000508459 IGHV3OR16-13A0A075B7E8 117 aa10.9□□□□□ -0.66
HMGCLL1-208ENST00000508459 IGHV3-49A0A0A0MS15 119 aa10.9□□□□□ -0.66
HMGCLL1-208ENST00000508459 IGHV3-74A0A0B4J1X5 117 aa10.9□□□□□ -0.66
HMGCLL1-208ENST00000508459 IGHV3-66A0A0C4DH42 116 aa10.9□□□□□ -0.66
HMGCLL1-208ENST00000508459 RBAKDNA6NC62 111 aa10.9□□□□□ -0.66
HMGCLL1-208ENST00000508459 H3BQ15 152 aa10.9□□□□□ -0.66
HMGCLL1-208ENST00000508459 WIPF1O43516 503 aa10.9□□□□□ -0.66
HMGCLL1-208ENST00000508459 SLC25A5P05141 298 aaKnown RBP10.9□□□□□ -0.66
HMGCLL1-208ENST00000508459 HAGHQ16775 308 aa10.9□□□□□ -0.66
HMGCLL1-208ENST00000508459 TOR2AQ5JU69 321 aa10.9□□□□□ -0.66
HMGCLL1-208ENST00000508459 COMMD7Q86VX2 200 aa10.9□□□□□ -0.66
HMGCLL1-208ENST00000508459 SPATA3Q8NHX4 192 aa10.9□□□□□ -0.66
HMGCLL1-208ENST00000508459 ATG101Q9BSB4 218 aa10.9□□□□□ -0.66
HMGCLL1-208ENST00000508459 SLC35B3Q9H1N7 401 aa10.9□□□□□ -0.66
HMGCLL1-208ENST00000508459 MS4A6AQ9H2W1 248 aa10.9□□□□□ -0.66
HMGCLL1-208ENST00000508459 PGPA6NDG6 321 aa10.89□□□□□ -0.67
HMGCLL1-208ENST00000508459 CNN1P51911 297 aaKnown RBP10.89□□□□□ -0.67
HMGCLL1-208ENST00000508459 UBE2G2P60604 165 aa10.89□□□□□ -0.67
HMGCLL1-208ENST00000508459 SUMO1P63165 101 aaKnown RBP10.89□□□□□ -0.67
HMGCLL1-208ENST00000508459 LCE2AQ5TA79 106 aaPredicted RBP10.89□□□□□ -0.67
HMGCLL1-208ENST00000508459 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.89□□□□□ -0.67
HMGCLL1-208ENST00000508459 SMIM12Q96EX1 92 aa10.89□□□□□ -0.67
HMGCLL1-208ENST00000508459 TREM1Q9NP99 234 aa10.89□□□□□ -0.67
HMGCLL1-208ENST00000508459 BIN3Q9NQY0 253 aa10.89□□□□□ -0.67
HMGCLL1-208ENST00000508459 CCL20P78556 96 aa10.88□□□□□ -0.67
HMGCLL1-208ENST00000508459 ICAM4Q14773 271 aa10.88□□□□□ -0.67
HMGCLL1-208ENST00000508459 PSG3Q16557 428 aa10.88□□□□□ -0.67
HMGCLL1-208ENST00000508459 GTSCR1Q86UQ5 136 aa10.88□□□□□ -0.67
HMGCLL1-208ENST00000508459 CYB561D1Q8N8Q1 229 aa10.88□□□□□ -0.67
HMGCLL1-208ENST00000508459 OR10J6PQ8NGY7 276 aa10.88□□□□□ -0.67
HMGCLL1-208ENST00000508459 C11orf52Q96A22 123 aa10.88□□□□□ -0.67
HMGCLL1-208ENST00000508459 TMPRSS5Q9H3S3 457 aa10.88□□□□□ -0.67
HMGCLL1-208ENST00000508459 EPDR1Q9UM22 224 aa10.88□□□□□ -0.67
HMGCLL1-208ENST00000508459 SMAD5-AS1Q9Y6J3 95 aa10.88□□□□□ -0.67
HMGCLL1-208ENST00000508459 KRBOX1C9JBD0 128 aa10.87□□□□□ -0.67
HMGCLL1-208ENST00000508459 K7EQG2 157 aa10.87□□□□□ -0.67
HMGCLL1-208ENST00000508459 DUSP14O95147 198 aaKnown RBP10.87□□□□□ -0.67
HMGCLL1-208ENST00000508459 UBE2G1P62253 170 aa10.87□□□□□ -0.67
HMGCLL1-208ENST00000508459 CD300EQ496F6 205 aaPredicted RBP10.87□□□□□ -0.67
HMGCLL1-208ENST00000508459 EBLN2Q6P2I7 272 aa10.87□□□□□ -0.67
HMGCLL1-208ENST00000508459 CCDC28AQ8IWP9 274 aa10.87□□□□□ -0.67
HMGCLL1-208ENST00000508459 TMEM61Q8N0U2 210 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms