RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 TFPI2P48307 235 aa10.64□□□□□ -0.71
RNF4-208ENST00000507247 BLOC1S1P78537 153 aa10.64□□□□□ -0.71
RNF4-208ENST00000507247 CCL20P78556 96 aa10.64□□□□□ -0.71
RNF4-208ENST00000507247 RBPMS2Q6ZRY4 209 aaKnown RBP10.64□□□□□ -0.71
RNF4-208ENST00000507247 ZNF767PQ75MW2 155 aa10.64□□□□□ -0.71
RNF4-208ENST00000507247 WFDC3Q8IUB2 231 aa10.64□□□□□ -0.71
RNF4-208ENST00000507247 IQCF2Q8IXL9 164 aa10.64□□□□□ -0.71
RNF4-208ENST00000507247 SUN5Q8TC36 379 aa10.64□□□□□ -0.71
RNF4-208ENST00000507247 DCANP1Q8TF63 244 aa10.64□□□□□ -0.71
RNF4-208ENST00000507247 BLNKQ8WV28 456 aa10.64□□□□□ -0.71
RNF4-208ENST00000507247 NRN1Q9NPD7 142 aa10.64□□□□□ -0.71
RNF4-208ENST00000507247 TRBV19A0A075B6N1 114 aa10.63□□□□□ -0.71
RNF4-208ENST00000507247 K7EQG2 157 aa10.63□□□□□ -0.71
RNF4-208ENST00000507247 NDUFB4O95168 129 aa10.63□□□□□ -0.71
RNF4-208ENST00000507247 FAM24BQ8N5W8 94 aa10.63□□□□□ -0.71
RNF4-208ENST00000507247 LRRC20Q8TCA0 184 aa10.63□□□□□ -0.71
RNF4-208ENST00000507247 VWFP04275 2813 aa10.62□□□□□ -0.71
RNF4-208ENST00000507247 TRAV8-2A0A0B4J237 113 aa10.62□□□□□ -0.71
RNF4-208ENST00000507247 GUCA2BQ16661 112 aa10.62□□□□□ -0.71
RNF4-208ENST00000507247 IGFL4Q6B9Z1 124 aa10.62□□□□□ -0.71
RNF4-208ENST00000507247 LCN12Q6JVE5 192 aa10.62□□□□□ -0.71
RNF4-208ENST00000507247 LYPD6BQ8NI32 183 aa10.62□□□□□ -0.71
RNF4-208ENST00000507247 SPAG8Q99932 426 aaPredicted RBP10.62□□□□□ -0.71
RNF4-208ENST00000507247 TMEM167BQ9NRX6 74 aa10.62□□□□□ -0.71
RNF4-208ENST00000507247 ZNF256Q9Y2P7 627 aaPredicted RBP10.62□□□□□ -0.71
RNF4-208ENST00000507247 G3V4G9 280 aa10.61□□□□□ -0.71
RNF4-208ENST00000507247 DNASE2O00115 360 aaPredicted RBP10.61□□□□□ -0.71
RNF4-208ENST00000507247 RGS13O14921 159 aa10.61□□□□□ -0.71
RNF4-208ENST00000507247 HBE1P02100 147 aa10.61□□□□□ -0.71
RNF4-208ENST00000507247 HLA-DMBP28068 263 aa10.61□□□□□ -0.71
RNF4-208ENST00000507247 MEOX2P50222 304 aa10.61□□□□□ -0.71
RNF4-208ENST00000507247 PAFAH1B2P68402 229 aa10.61□□□□□ -0.71
RNF4-208ENST00000507247 PDE6HQ13956 83 aa10.61□□□□□ -0.71
RNF4-208ENST00000507247 GUK1Q16774 197 aa10.61□□□□□ -0.71
RNF4-208ENST00000507247 GPR61Q9BZJ8 451 aa10.61□□□□□ -0.71
RNF4-208ENST00000507247 ZNF331Q9NQX6 463 aaPredicted RBP10.61□□□□□ -0.71
RNF4-208ENST00000507247 TRAV2A0A0B4J234 112 aa10.6□□□□□ -0.71
RNF4-208ENST00000507247 ZNF253O75346 499 aa10.6□□□□□ -0.71
RNF4-208ENST00000507247 PSMB3P49720 205 aa10.6□□□□□ -0.71
RNF4-208ENST00000507247 UBE2G2P60604 165 aa10.6□□□□□ -0.71
RNF4-208ENST00000507247 SAMD5Q5TGI4 173 aa10.6□□□□□ -0.71
RNF4-208ENST00000507247 RNF182Q8N6D2 247 aa10.6□□□□□ -0.71
RNF4-208ENST00000507247 C20orf173Q96LM9 149 aa10.6□□□□□ -0.71
RNF4-208ENST00000507247 SLC50A1Q9BRV3 221 aa10.6□□□□□ -0.71
RNF4-208ENST00000507247 YTHDF2Q9Y5A9 579 aaKnown RBP10.6□□□□□ -0.71
RNF4-208ENST00000507247 CMYA5Q8N3K9 4069 aa10.6□□□□□ -0.71
RNF4-208ENST00000507247 OR4C46A6NHA9 309 aa10.59□□□□□ -0.71
RNF4-208ENST00000507247 TEX46H3BTG2 121 aa10.59□□□□□ -0.71
RNF4-208ENST00000507247 PRB4P10163 310 aaPredicted RBP10.59□□□□□ -0.71
RNF4-208ENST00000507247 RANP62826 216 aaKnown RBP10.59□□□□□ -0.71
RNF4-208ENST00000507247 BEAN1Q3B7T3 259 aa10.59□□□□□ -0.71
RNF4-208ENST00000507247 EXOC3-AS1Q8N2X6 119 aa10.59□□□□□ -0.71
RNF4-208ENST00000507247 C16orf92Q96LL3 132 aa10.59□□□□□ -0.71
RNF4-208ENST00000507247 Q9H3A6 140 aa10.59□□□□□ -0.71
RNF4-208ENST00000507247 NOTCH3Q9UM47 2321 aa10.58□□□□□ -0.72
RNF4-208ENST00000507247 FAM74A7A6NL05 159 aa10.58□□□□□ -0.72
RNF4-208ENST00000507247 ISLRO14498 428 aa10.58□□□□□ -0.72
RNF4-208ENST00000507247 ZNF688P0C7X2 276 aa10.58□□□□□ -0.72
RNF4-208ENST00000507247 KRTAP10-11P60412 298 aa10.58□□□□□ -0.72
RNF4-208ENST00000507247 EGFEM1PQ0D2K5 195 aa10.58□□□□□ -0.72
RNF4-208ENST00000507247 CLLU1Q5K131 121 aa10.58□□□□□ -0.72
RNF4-208ENST00000507247 GNG13Q9P2W3 67 aa10.58□□□□□ -0.72
RNF4-208ENST00000507247 SORL1Q92673 2214 aa10.57□□□□□ -0.72
RNF4-208ENST00000507247 A0A1W2PRE2 83 aa10.57□□□□□ -0.72
RNF4-208ENST00000507247 GGTLC3B5MD39 225 aa10.57□□□□□ -0.72
RNF4-208ENST00000507247 M0R3E3 92 aa10.57□□□□□ -0.72
RNF4-208ENST00000507247 PAGE4O60829 102 aa10.57□□□□□ -0.72
RNF4-208ENST00000507247 CD7P09564 240 aa10.57□□□□□ -0.72
RNF4-208ENST00000507247 RAB14P61106 215 aa10.57□□□□□ -0.72
RNF4-208ENST00000507247 PSG9Q00887 426 aa10.57□□□□□ -0.72
RNF4-208ENST00000507247 ICAM4Q14773 271 aa10.57□□□□□ -0.72
RNF4-208ENST00000507247 ODF3L2Q3SX64 289 aa10.57□□□□□ -0.72
RNF4-208ENST00000507247 MAP6D1Q9H9H5 199 aa10.57□□□□□ -0.72
RNF4-208ENST00000507247 PGPA6NDG6 321 aa10.56□□□□□ -0.72
RNF4-208ENST00000507247 ZNF705FA8MVS1 300 aaPredicted RBP10.56□□□□□ -0.72
RNF4-208ENST00000507247 ID1P41134 155 aa10.56□□□□□ -0.72
RNF4-208ENST00000507247 ATP5G3P48201 142 aa10.56□□□□□ -0.72
RNF4-208ENST00000507247 PPT1P50897 306 aa10.56□□□□□ -0.72
RNF4-208ENST00000507247 DEFB131AP59861 70 aa10.56□□□□□ -0.72
RNF4-208ENST00000507247 DEFB1P60022 68 aa10.56□□□□□ -0.72
RNF4-208ENST00000507247 PMS2P11Q13670 270 aa10.56□□□□□ -0.72
RNF4-208ENST00000507247 PSG3Q16557 428 aa10.56□□□□□ -0.72
RNF4-208ENST00000507247 HAGHQ16775 308 aa10.56□□□□□ -0.72
RNF4-208ENST00000507247 PSMG4Q5JS54 123 aa10.56□□□□□ -0.72
RNF4-208ENST00000507247 SAMD13Q5VXD3 122 aa10.56□□□□□ -0.72
RNF4-208ENST00000507247 LYPD1Q8N2G4 141 aa10.56□□□□□ -0.72
RNF4-208ENST00000507247 LINC00052Q96N35 136 aa10.56□□□□□ -0.72
RNF4-208ENST00000507247 AAMDCQ9H7C9 122 aa10.56□□□□□ -0.72
RNF4-208ENST00000507247 MANBALQ9NQG1 85 aa10.56□□□□□ -0.72
RNF4-208ENST00000507247 OTORQ9NRC9 128 aa10.56□□□□□ -0.72
RNF4-208ENST00000507247 C19orf73Q9NVV2 129 aa10.56□□□□□ -0.72
RNF4-208ENST00000507247 ARL2-SNX15V9GYD0 113 aa10.56□□□□□ -0.72
RNF4-208ENST00000507247 SNRPD3P62318 126 aaKnown RBP10.55□□□□□ -0.72
RNF4-208ENST00000507247 SUMO1P63165 101 aaKnown RBP10.55□□□□□ -0.72
RNF4-208ENST00000507247 ZNF124Q15973 351 aa10.55□□□□□ -0.72
RNF4-208ENST00000507247 CST9LP1Q5W188 147 aa10.55□□□□□ -0.72
RNF4-208ENST00000507247 PRR25Q96S07 402 aa10.55□□□□□ -0.72
RNF4-208ENST00000507247 WFDC10AQ9H1F0 79 aa10.55□□□□□ -0.72
RNF4-208ENST00000507247 LOC102723971A0A1B0GUV8 181 aa10.54□□□□□ -0.72
RNF4-208ENST00000507247 PRAC2D3DTV9 90 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms