RNA–Protein interactions for RNA: ENST00000506098.5

NUP54-204, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-204ENST00000506098 AKR1C8PQ5T2L2 129 aa5.51□□□□□ -1.53
NUP54-204ENST00000506098 HIST2H2BDQ6DRA6 164 aa5.51□□□□□ -1.53
NUP54-204ENST00000506098 TOMM20LQ6UXN7 152 aa5.51□□□□□ -1.53
NUP54-204ENST00000506098 PATE2Q6UY27 113 aa5.51□□□□□ -1.53
NUP54-204ENST00000506098 Q6ZRG5 221 aa5.51□□□□□ -1.53
NUP54-204ENST00000506098 GATAD1Q8WUU5 269 aa5.51□□□□□ -1.53
NUP54-204ENST00000506098 TMEM190Q8WZ59 177 aa5.51□□□□□ -1.53
NUP54-204ENST00000506098 RNF125Q96EQ8 232 aa5.51□□□□□ -1.53
NUP54-204ENST00000506098 SNHG12Q9BXW3 62 aa5.51□□□□□ -1.53
NUP54-204ENST00000506098 DNAJC4Q9NNZ3 241 aa5.51□□□□□ -1.53
NUP54-204ENST00000506098 PGPEP1Q9NXJ5 209 aa5.51□□□□□ -1.53
NUP54-204ENST00000506098 PLA2G2EQ9NZK7 142 aa5.51□□□□□ -1.53
NUP54-204ENST00000506098 AGRNO00468 2067 aa5.51□□□□□ -1.53
NUP54-204ENST00000506098 A0A1W2PRX2 142 aa5.5□□□□□ -1.53
NUP54-204ENST00000506098 UMAD1C9J7I0 102 aa5.5□□□□□ -1.53
NUP54-204ENST00000506098 IL4P05112 153 aa5.5□□□□□ -1.53
NUP54-204ENST00000506098 OR5G3P0C626 314 aa5.5□□□□□ -1.53
NUP54-204ENST00000506098 CRYBB3P26998 211 aa5.5□□□□□ -1.53
NUP54-204ENST00000506098 SULT1A2P50226 295 aa5.5□□□□□ -1.53
NUP54-204ENST00000506098 DEFB136Q30KP8 78 aa5.5□□□□□ -1.53
NUP54-204ENST00000506098 ACOT6Q3I5F7 207 aaPredicted RBP5.5□□□□□ -1.53
NUP54-204ENST00000506098 TMEM41BQ5BJD5 291 aa5.5□□□□□ -1.53
NUP54-204ENST00000506098 COL5A1-AS1Q5SY13 56 aa5.5□□□□□ -1.53
NUP54-204ENST00000506098 SHISA2Q6UWI4 295 aa5.5□□□□□ -1.53
NUP54-204ENST00000506098 DPPA3Q6W0C5 159 aa5.5□□□□□ -1.53
NUP54-204ENST00000506098 C12orf54Q6X4T0 127 aa5.5□□□□□ -1.53
NUP54-204ENST00000506098 IL34Q6ZMJ4 242 aa5.5□□□□□ -1.53
NUP54-204ENST00000506098 LINC01551Q86U37 167 aa5.5□□□□□ -1.53
NUP54-204ENST00000506098 OR1L4Q8NGR5 311 aa5.5□□□□□ -1.53
NUP54-204ENST00000506098 TMED6Q8WW62 240 aa5.5□□□□□ -1.53
NUP54-204ENST00000506098 GLMPQ8WWB7 406 aa5.5□□□□□ -1.53
NUP54-204ENST00000506098 TMEM37Q8WXS4 190 aa5.5□□□□□ -1.53
NUP54-204ENST00000506098 HIST1H2BAQ96A08 127 aa5.5□□□□□ -1.53
NUP54-204ENST00000506098 SAT2Q96F10 170 aaPredicted RBP5.5□□□□□ -1.53
NUP54-204ENST00000506098 RCC1LQ96I51 464 aaKnown RBP5.5□□□□□ -1.53
NUP54-204ENST00000506098 VPS25Q9BRG1 176 aa5.5□□□□□ -1.53
NUP54-204ENST00000506098 VSIRQ9H7M9 311 aa5.5□□□□□ -1.53
NUP54-204ENST00000506098 U3KQE9 123 aa5.5□□□□□ -1.53
NUP54-204ENST00000506098 IGHV3-35A0A0C4DH35 117 aa5.49□□□□□ -1.53
NUP54-204ENST00000506098 EREGO14944 169 aa5.49□□□□□ -1.53
NUP54-204ENST00000506098 HYPMO75409 117 aa5.49□□□□□ -1.53
NUP54-204ENST00000506098 C8orf88P0DMB2 117 aa5.49□□□□□ -1.53
NUP54-204ENST00000506098 S100A7P31151 101 aa5.49□□□□□ -1.53
NUP54-204ENST00000506098 SLURP1P55000 103 aa5.49□□□□□ -1.53
NUP54-204ENST00000506098 LYZP61626 148 aa5.49□□□□□ -1.53
NUP54-204ENST00000506098 NSUN5P1Q3KNT7 163 aa5.49□□□□□ -1.53
NUP54-204ENST00000506098 KRTAP21-3Q3LHN1 58 aa5.49□□□□□ -1.53
NUP54-204ENST00000506098 GCSAMLQ5JQS6 135 aa5.49□□□□□ -1.53
NUP54-204ENST00000506098 C10orf113Q5VZT2 155 aa5.49□□□□□ -1.53
NUP54-204ENST00000506098 ALKAL2Q6UX46 152 aa5.49□□□□□ -1.53
NUP54-204ENST00000506098 UNQ9165/PRO28630Q6UXU0 137 aa5.49□□□□□ -1.53
NUP54-204ENST00000506098 S100A7AQ86SG5 101 aa5.49□□□□□ -1.53
NUP54-204ENST00000506098 RPP25LQ8N5L8 163 aaKnown RBP5.49□□□□□ -1.53
NUP54-204ENST00000506098 C3orf56Q8N813 242 aa5.49□□□□□ -1.53
NUP54-204ENST00000506098 OR4F17Q8NGA8 305 aa5.49□□□□□ -1.53
NUP54-204ENST00000506098 OR10G4Q8NGN3 311 aa5.49□□□□□ -1.53
NUP54-204ENST00000506098 OR10G9Q8NGN4 311 aa5.49□□□□□ -1.53
NUP54-204ENST00000506098 OR10G7Q8NGN6 311 aa5.49□□□□□ -1.53
NUP54-204ENST00000506098 OR1B1Q8NGR6 318 aa5.49□□□□□ -1.53
NUP54-204ENST00000506098 DLX4Q92988 240 aaPredicted RBP5.49□□□□□ -1.53
NUP54-204ENST00000506098 OR4F4Q96R69 305 aa5.49□□□□□ -1.53
NUP54-204ENST00000506098 ALKBH7Q9BT30 221 aaPredicted RBP5.49□□□□□ -1.53
NUP54-204ENST00000506098 TPPP3Q9BW30 176 aa5.49□□□□□ -1.53
NUP54-204ENST00000506098 MRPL32Q9BYC8 188 aaKnown RBP5.49□□□□□ -1.53
NUP54-204ENST00000506098 DAZ1Q9NQZ3 744 aaKnown RBP5.49□□□□□ -1.53
NUP54-204ENST00000506098 SPANXA1Q9NS26 97 aa5.49□□□□□ -1.53
NUP54-204ENST00000506098 RPRMQ9NS64 109 aa5.49□□□□□ -1.53
NUP54-204ENST00000506098 TECRQ9NZ01 308 aaKnown RBP5.49□□□□□ -1.53
NUP54-204ENST00000506098 RABAC1Q9UI14 185 aa5.49□□□□□ -1.53
NUP54-204ENST00000506098 HIGD1AQ9Y241 93 aa5.49□□□□□ -1.53
NUP54-204ENST00000506098 UFC1Q9Y3C8 167 aa5.49□□□□□ -1.53
NUP54-204ENST00000506098 TNFRSF18Q9Y5U5 241 aa5.49□□□□□ -1.53
NUP54-204ENST00000506098 TGIF2-C20orf24A0A0A6YYL0 155 aa5.48□□□□□ -1.53
NUP54-204ENST00000506098 TMEM213A2RRL7 107 aa5.48□□□□□ -1.53
NUP54-204ENST00000506098 H3BRN7 92 aa5.48□□□□□ -1.53
NUP54-204ENST00000506098 BUB3O43684 328 aa5.48□□□□□ -1.53
NUP54-204ENST00000506098 COX7A2P2O60397 106 aa5.48□□□□□ -1.53
NUP54-204ENST00000506098 ORM2P19652 201 aa5.48□□□□□ -1.53
NUP54-204ENST00000506098 RAB5AP20339 215 aa5.48□□□□□ -1.53
NUP54-204ENST00000506098 NPPCP23582 126 aa5.48□□□□□ -1.53
NUP54-204ENST00000506098 PPT1P50897 306 aa5.48□□□□□ -1.53
NUP54-204ENST00000506098 SYNJ2BPP57105 145 aa5.48□□□□□ -1.53
NUP54-204ENST00000506098 RHOBP62745 196 aa5.48□□□□□ -1.53
NUP54-204ENST00000506098 RANP62826 216 aaKnown RBP5.48□□□□□ -1.53
NUP54-204ENST00000506098 UBE2V1Q13404 147 aa5.48□□□□□ -1.53
NUP54-204ENST00000506098 FAM78BQ5VT40 261 aa5.48□□□□□ -1.53
NUP54-204ENST00000506098 LINC00305Q7Z4B0 112 aa5.48□□□□□ -1.53
NUP54-204ENST00000506098 CBLN2Q8IUK8 224 aa5.48□□□□□ -1.53
NUP54-204ENST00000506098 OR9G4Q8NGQ1 327 aa5.48□□□□□ -1.53
NUP54-204ENST00000506098 RNF141Q8WVD5 230 aa5.48□□□□□ -1.53
NUP54-204ENST00000506098 MBD3L1Q8WWY6 194 aa5.48□□□□□ -1.53
NUP54-204ENST00000506098 DUX3Q96PT4 197 aa5.48□□□□□ -1.53
NUP54-204ENST00000506098 METTL26Q96S19 204 aa5.48□□□□□ -1.53
NUP54-204ENST00000506098 SHANK2-AS3Q9BTD1 123 aa5.48□□□□□ -1.53
NUP54-204ENST00000506098 SLC25A39Q9BZJ4 359 aaPredicted RBP5.48□□□□□ -1.53
NUP54-204ENST00000506098 SIGLEC8Q9NYZ4 499 aa5.48□□□□□ -1.53
NUP54-204ENST00000506098 PEMTQ9UBM1 199 aa5.48□□□□□ -1.53
NUP54-204ENST00000506098 FUT9Q9Y231 359 aa5.48□□□□□ -1.53
NUP54-204ENST00000506098 TRRAPQ9Y4A5 3859 aa5.48□□□□□ -1.53
NUP54-204ENST00000506098 VWFP04275 2813 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 121.1 ms